Metadata-Version: 2.1
Name: alva_machinery
Version: 0.0.1
Summary: Home_made machinery for image analysis
Home-page: https://github.com/alvason
Author: Alvason Zhenhua Li
Author-email: alvasonli@gmail.com
License: UNKNOWN
Project-URL: Bug Tracker, https://github.com/alvason/identifying_neurite_by_RRS/issues
Description: # Identifying neurite by RRS method
        This repository contains code for implementing the RRS method initially described in the paper: 
        
        <https://doi.org/10.1038/s41598-019-39962-0>
        
        <https://www.nature.com/articles/s41598-019-39962-0>
        ```
        Random-Reaction-Seed Method for Automated Identification of Neurite Elongation and Branching
        by Alvason Li (2019)
        ```
        (is still working on this repository, a new AlvaHmm package will be ready soon...)
        ## Overview
        ### tracing neurite in microfuidic device
        ![](https://github.com/alvason/identifying_neurite_by_RRS/blob/master/figure/AlvaHmm_demo_edge_detection_selected_seeding_selected_seed_window0.jpg)
        ![](https://github.com/alvason/identifying_neurite_by_RRS/blob/master/figure/AlvaHmm_demo_edge_detection_selected_seeding_connected_way_window3.png)
        
        ### Prerequisites
        This code is written and tested in Python 3.6.5.
        The required Python libaries are:
        * NumPy
        * SciPy
        * Matplotlib
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.6
Description-Content-Type: text/markdown
