Metadata-Version: 2.1
Name: casq
Version: 0.8.0
Summary: CaSQ: Celldesigner as Sbml-Qual
Home-page: https://lifeware.inria.fr/~soliman/post/casq/
Author: Sylvain Soliman
Author-email: Sylvain.Soliman@inria.fr
License: GPLv3
Project-URL: Documentation, https://readthedocs.org/projects/casq/
Project-URL: Code, https://gitlab.inria.fr/soliman/casq/
Project-URL: Mirror, https://github.com/soli/casq
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        **CaSQ** converts `CellDesigner`_ models to Boolean models encoded in
        `SBML-Qual`_ with a rather strict semantics defined in a
        *submitted* article.
        
        .. _`CellDesigner`: http://celldesigner.org
        .. _`SBML-Qual`: http://sbml.org
        
        Install
        =======
        
        CaSQ is provided as a Python (>= 3.5) package, you can install it from the `Python package index`_ with ``pip``, ``conda`` or your Python package manager of choice:
        
        .. _`Python package index`: https://pypi.org/project/casq/
        
        .. code:: bash
        
           $ pip3 install casq
        
        Usage
        =====
        
        Just follow the instructions::
        
           $ casq --help
           usage: casq [-h] [-v] [-d] [-c] [-s] [-r S] [infile] [outfile]
        
           Convert CellDesigner models to SBML-qual with a rather strict semantics.
           Copyright (C) 2019-2020 Sylvain.Soliman@inria.fr GPLv3
        
           positional arguments:
             infile            CellDesigner File
             outfile           SBML-Qual File
        
           optional arguments:
             -h, --help        show this help message and exit
             -v, --version     show program's version number and exit
             -d, --debug       Display a lot of debug information
             -c, --csv         Store the species information in a separate CSV file
             -s, --sif         Store the influence information in a separate SIF file
             -r S, --remove S  Delete connected components in the resulting model if
                               their size is smaller than S. A negative S leads to keep
                               only the biggest(s) connected component(s)
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Requires-Python: >=3.5
Description-Content-Type: text/x-rst
Provides-Extra: dev
