COPYRIGHT
LICENSE
MANIFEST.in
README.md
requirements.txt
setup.cfg
setup.py
gillespy2/__init__.py
gillespy2/__version__.py
gillespy2.egg-info/PKG-INFO
gillespy2.egg-info/SOURCES.txt
gillespy2.egg-info/dependency_links.txt
gillespy2.egg-info/requires.txt
gillespy2.egg-info/top_level.txt
gillespy2/core/__init__.py
gillespy2/core/assignmentrule.py
gillespy2/core/events.py
gillespy2/core/functiondefinition.py
gillespy2/core/gillespyError.py
gillespy2/core/gillespySolver.py
gillespy2/core/liveGraphing.py
gillespy2/core/model.py
gillespy2/core/parameter.py
gillespy2/core/raterule.py
gillespy2/core/reaction.py
gillespy2/core/results.py
gillespy2/core/sortableobject.py
gillespy2/core/species.py
gillespy2/sbml/SBMLimport.py
gillespy2/sbml/__init__.py
gillespy2/solvers/__init__.py
gillespy2/solvers/cpp/__init__.py
gillespy2/solvers/cpp/example_models.py
gillespy2/solvers/cpp/ssa_c_solver.py
gillespy2/solvers/cpp/variable_ssa_c_solver.py
gillespy2/solvers/cpp/c_base/SimulationTemplate.cpp
gillespy2/solvers/cpp/c_base/VariableSimulationTemplate.cpp
gillespy2/solvers/cpp/c_base/makefile
gillespy2/solvers/cpp/c_base/model.cpp
gillespy2/solvers/cpp/c_base/model.h
gillespy2/solvers/cpp/c_base/ssa.cpp
gillespy2/solvers/cpp/c_base/ssa.h
gillespy2/solvers/cython/__init__.py
gillespy2/solvers/cython/cython_ssa_solver.pyx
gillespy2/solvers/numpy/__init__.py
gillespy2/solvers/numpy/basic_ode_solver.py
gillespy2/solvers/numpy/basic_tau_hybrid_solver.py
gillespy2/solvers/numpy/basic_tau_leaping_solver.py
gillespy2/solvers/numpy/ode_solver.py
gillespy2/solvers/numpy/ssa_solver.py
gillespy2/solvers/numpy/tau_hybrid_solver.py
gillespy2/solvers/numpy/tau_leaping_solver.py
gillespy2/solvers/stochkit/__init__.py
gillespy2/solvers/stochkit/stochkit_solvers.py
gillespy2/solvers/utilities/Tau.py
gillespy2/solvers/utilities/__init__.py
gillespy2/solvers/utilities/cpp_support_test.py
gillespy2/solvers/utilities/solverutils.py
test/test_SBML.py
test/test_StochML.py
test/test_all_solvers.py
test/test_basic_tau_leaping_solver.py
test/test_empty_model.py
test/test_example_models.py
test/test_hybrid_solver.py
test/test_model.py
test/test_numpy_ssa_solver.py
test/test_ode_solver.py
test/test_pause_resume.py
test/test_propensity_parser.py
test/test_results.py
test/test_simple_model.py
test/test_ssa_c_solver.py
test/test_sys_init.py
test/test_tau_leaping_solver.py
test/test_variable_ssa_c_solver.py