README.md
setup.py
src/transcov/__init__.py
src/transcov/bam.py
src/transcov/cli.py
src/transcov/generator.py
src/transcov/manipulations.py
src/transcov/preprocessor.py
src/transcov/transcript_annotation.py
src/transcov/tss.py
src/transcov/utils.py
src/transcov.egg-info/PKG-INFO
src/transcov.egg-info/SOURCES.txt
src/transcov.egg-info/dependency_links.txt
src/transcov.egg-info/entry_points.txt
src/transcov.egg-info/requires.txt
src/transcov.egg-info/top_level.txt
test/test_generator.py
test/test_manipulations.py