README.md
pyproject.toml
setup.py
mokapot/__init__.py
mokapot/brew.py
mokapot/confidence.py
mokapot/config.py
mokapot/dataset.py
mokapot/model.py
mokapot/mokapot.py
mokapot/peptides.py
mokapot/picked_protein.py
mokapot/proteins.py
mokapot/qvalues.py
mokapot/utils.py
mokapot.egg-info/PKG-INFO
mokapot.egg-info/SOURCES.txt
mokapot.egg-info/dependency_links.txt
mokapot.egg-info/entry_points.txt
mokapot.egg-info/requires.txt
mokapot.egg-info/top_level.txt
mokapot/parsers/__init__.py
mokapot/parsers/fasta.py
mokapot/parsers/pepxml.py
mokapot/parsers/pin.py
mokapot/writers/__init__.py
mokapot/writers/flashlfq.py
mokapot/writers/txt.py
tests/__init__.py
tests/fixtures.py
tests/unit_tests/__init__.py
tests/unit_tests/test_brew.py
tests/unit_tests/test_confidence.py
tests/unit_tests/test_dataset.py
tests/unit_tests/test_model.py
tests/unit_tests/test_mokapot.py
tests/unit_tests/test_parser_pepxml.py
tests/unit_tests/test_parser_pin.py
tests/unit_tests/test_peptides.py
tests/unit_tests/test_picked_protein.py
tests/unit_tests/test_proteins.py
tests/unit_tests/test_qvalues.py
tests/unit_tests/test_utils.py
tests/unit_tests/test_version.py
tests/unit_tests/test_writer_flashlfq.py
tests/unit_tests/test_writer_txt.py