.gitignore
CHANGELOG.md
CITATION.md
LICENSE
MANIFEST.in
README.md
mkdocs.yml
pyproject.toml
.github/workflows/docs.yml
autolamella/__init__.py
autolamella/config.py
autolamella/structures.py
autolamella.egg-info/PKG-INFO
autolamella.egg-info/SOURCES.txt
autolamella.egg-info/dependency_links.txt
autolamella.egg-info/entry_points.txt
autolamella.egg-info/requires.txt
autolamella.egg-info/top_level.txt
autolamella/compat/notebook.ipynb
autolamella/compat/odemis.py
autolamella/log/.gitkeep
autolamella/protocol/.gitkeep
autolamella/protocol/__init__.py
autolamella/protocol/constants.py
autolamella/protocol/protocol-liftout.yaml
autolamella/protocol/protocol-on-grid.yaml
autolamella/protocol/protocol-serial-liftout.yaml
autolamella/protocol/protocol-trench.yaml
autolamella/protocol/protocol-waffle.yaml
autolamella/protocol/validation.py
autolamella/protocol/archive/protocol-liftout-archive.yaml
autolamella/protocol/archive/protocol-odemis-on-grid-archive.yaml
autolamella/protocol/archive/protocol-on-grid-v1-archive.yaml
autolamella/protocol/archive/protocol-on-grid-v2-archive.yaml
autolamella/protocol/archive/protocol-serial-liftout-archive.yaml
autolamella/protocol/archive/protocol-waffle-archive.yaml
autolamella/tools/__init__.py
autolamella/tools/data.py
autolamella/tools/notebook.ipynb
autolamella/tools/reporting.py
autolamella/tools/stats.py
autolamella/tools/upload_to_hf.py
autolamella/ui/AutoLamellaUI.py
autolamella/ui/AutoLamellaWorkflowDialog.py
autolamella/ui/__init__.py
autolamella/ui/tooltips.py
autolamella/ui/utils.py
autolamella/ui/qt/AutoLamellaUI.py
autolamella/ui/qt/AutoLamellaWorkflowDialog.py
autolamella/workflows/actions.py
autolamella/workflows/autoliftout.py
autolamella/workflows/core.py
autolamella/workflows/experimental.py
autolamella/workflows/notebook.ipynb
autolamella/workflows/runners.py
autolamella/workflows/serial.py
autolamella/workflows/ui.py
scripts/.gitkeep
scripts/install.bat
scripts/run_protocol_conversion.py
scripts/shortcut.py
scripts/ui.bat
tests/test_structures.py