# STOCKHOLM 1.0

#=GS             GCA_000004655.2_ASM465v1_rm.out4 DE    SINE
#=GS            GCA_000004655.2_ASM465v1_rm.out47 DE    SINE
#=GS            GCA_000004655.2_ASM465v1_rm.out64 DE    SINE
#=GS            GCA_000004655.2_ASM465v1_rm.out94 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out114 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out117 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out158 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out242 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out248 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out269 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out338 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out343 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out447 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out608 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out619 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out631 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out652 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out684 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out747 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out748 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out750 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out765 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out801 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out807 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out809 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out824 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out850 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out865 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out899 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out911 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out928 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out942 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out968 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1000 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1002 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1004 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1007 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1016 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1042 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1088 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1208 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1209 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1213 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1243 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1267 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1339 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1357 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1396 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1428 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1447 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1451 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1548 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1558 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1591 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1607 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1613 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1623 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1642 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1658 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1659 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1846 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1901 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1906 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1947 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1950 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1956 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1979 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2010 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2030 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2040 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2046 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2054 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2071 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2076 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2162 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2192 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2196 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2237 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2238 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2276 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2283 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2329 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2374 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2376 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2378 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2380 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2392 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2395 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2415 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2441 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2462 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2468 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2495 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2514 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2528 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2545 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2586 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2589 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2591 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2695 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2703 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2724 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2778 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2800 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2811 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2866 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2977 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3072 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3073 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3106 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3111 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3121 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3279 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3323 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3327 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3376 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3388 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3390 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3444 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3446 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3494 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3555 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3579 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3603 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3653 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3654 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3682 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3683 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3857 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3866 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3900 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3901 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3914 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3917 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3974 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4017 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4076 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4091 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4186 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4187 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4258 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4377 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4390 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4484 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4489 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4490 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4526 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4558 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4570 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4615 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4660 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4662 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4672 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4673 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4689 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4727 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4779 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4831 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4833 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4858 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4861 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4885 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4963 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5017 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5023 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5080 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5095 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5135 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5152 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5194 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5216 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5219 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5240 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5271 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5272 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5279 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5418 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5435 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5441 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5454 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5656 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5661 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5668 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5721 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5743 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5744 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5748 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5776 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5777 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5856 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5947 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6004 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6015 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6037 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6078 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6112 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6152 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6153 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6159 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6257 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6271 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6286 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6295 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6298 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6299 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6301 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6317 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6342 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6376 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6378 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6486 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6490 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6548 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6559 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6564 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6581 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6588 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6654 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6691 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6695 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6724 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6733 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6736 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6742 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6752 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6753 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6840 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6889 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7009 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7109 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7150 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7189 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7196 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7435 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7520 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7521 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7540 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7575 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7585 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7586 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7618 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7633 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7713 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7715 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7727 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7759 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7770 DE    SINE
#=GS    GCA_000576065.1_Oryza_nivara_v1.0_rm.out4 DE    SINE
#=GS   GCA_000576065.1_Oryza_nivara_v1.0_rm.out15 DE    SINE
#=GS   GCA_000576065.1_Oryza_nivara_v1.0_rm.out27 DE    SINE
#=GS   GCA_000576065.1_Oryza_nivara_v1.0_rm.out46 DE    SINE
#=GS   GCA_000576065.1_Oryza_nivara_v1.0_rm.out61 DE    SINE
#=GS   GCA_000576065.1_Oryza_nivara_v1.0_rm.out89 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out173 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out257 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out265 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out327 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out386 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out469 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out537 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out574 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out576 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out577 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out677 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out679 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out695 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out736 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out743 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out749 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out757 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out781 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out795 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out829 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out855 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out871 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out876 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out897 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out922 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out957 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1052 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1055 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1079 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1116 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1122 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1149 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1155 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1177 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1182 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1223 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1282 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1285 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1298 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1299 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1400 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1551 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1586 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1607 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1630 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1719 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1727 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1728 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1749 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1821 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1979 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2042 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2067 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2068 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2104 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2117 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2146 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2154 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2156 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2159 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2168 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2206 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2261 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2330 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2338 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2359 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2366 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2399 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2430 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2472 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2484 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2501 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2507 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2552 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2598 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2603 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2616 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2620 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2732 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2733 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2741 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2769 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2788 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2808 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2827 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2847 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2848 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2892 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2924 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2950 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2960 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3015 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3069 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3116 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3124 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3182 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3185 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3191 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3200 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3216 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3262 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3296 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3297 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3343 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3347 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3372 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3403 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3444 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3470 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3471 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3473 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3479 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3486 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3489 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3508 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3533 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3544 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3556 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3564 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3590 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3606 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3629 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3673 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3684 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3686 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3766 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3816 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3840 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3879 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3930 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4054 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4086 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4091 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4099 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4122 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4132 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4135 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4159 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4169 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4252 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4283 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4287 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4297 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4338 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4341 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4401 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4403 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4430 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4446 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4454 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4484 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4533 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4596 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4639 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4763 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4775 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4801 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4819 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4822 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4858 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4918 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4928 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4956 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4980 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4987 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4999 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5071 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5135 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5289 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5382 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5430 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5461 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5507 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5509 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5520 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5544 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5582 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5602 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5640 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5684 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5762 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5779 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5791 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5872 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5887 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5898 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5920 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5955 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5956 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5984 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6043 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6090 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6092 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6209 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6238 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6341 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6413 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6447 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6451 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6454 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6518 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6539 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6552 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6562 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6578 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6622 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6644 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6767 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6827 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6866 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6906 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out7004 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out7018 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out7045 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out7047 DE    SINE

GCA_000004655.2_ASM465v1_rm.out4              -------------------------GAGAAACGCCTAGGGGTCTTCCAGT
GCA_000004655.2_ASM465v1_rm.out47             -----------------------GAGAAACGTCCAAGGA--TTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out64             ------------------------TGAGAAGGCCCCCGGGGTATTCCGGC
GCA_000004655.2_ASM465v1_rm.out94             -------------------------GAGAAACGACCAGGGATCTTCCGAC
GCA_000004655.2_ASM465v1_rm.out114            --------------------------AG----------------------
GCA_000004655.2_ASM465v1_rm.out117            ---------------------------------TCCCAGGGCCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out158            ------------------------------AAACGTCAGA----------
GCA_000004655.2_ASM465v1_rm.out242            -------------------------GAGAAACGTACAGGGGGTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out248            -------------------------GAGAAACGCCCAGGGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out269            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out338            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out343            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out447            -------------------------GAGAAACGTATATGGGTCTTCCGGT
GCA_000004655.2_ASM465v1_rm.out608            --------------------------------TTCCGG-----------C
GCA_000004655.2_ASM465v1_rm.out619            ------------------------GAGAAACGTTTAGAG--TTTTTCGCC
GCA_000004655.2_ASM465v1_rm.out631            ----------------------------AAATGTCTAGGGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out652            -------------------------GAGAAACACCCAGGGGTCTTCCAGC
GCA_000004655.2_ASM465v1_rm.out684            -------------------------GAGAAACGCTTAGGGATCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out747            -------------------------GAGAAACGTCCAAGGGTCTTCTAGC
GCA_000004655.2_ASM465v1_rm.out748            -------------------------GAGAAACGTCCAAGGGTCTTCTAGC
GCA_000004655.2_ASM465v1_rm.out750            -------------------------GAGAAACACCCAAGGGTTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out765            -------------------------GAGAAAGGTCCGGAGGTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out801            -------------------------GAGAAACGTCCATGGGTCTTCCTGC
GCA_000004655.2_ASM465v1_rm.out807            --------------------------AGAAACTTCTAGGACTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out809            --------------------------AGAAACTTCTAGGACTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out824            ------------------------GAGAAATGTCTATGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out850            ------------------------------CGTCCAGTGATTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out865            -----------------------GGGAAACACCCACGGC--TCTTCTGGT
GCA_000004655.2_ASM465v1_rm.out899            ----------------------------GAGAAACATCCAGTGATTTGGT
GCA_000004655.2_ASM465v1_rm.out911            -------------------------GAGAAACTTCTAGTGGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out928            -------------------------------------GGGGATTTTCGGC
GCA_000004655.2_ASM465v1_rm.out942            ------------------------GAGAAATGTCTTAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out968            -----------------------TGAGAAACGCCTAGGG--GTTTTCTGA
GCA_000004655.2_ASM465v1_rm.out1000           -------------------------GAGAAACACCCAGTCGTTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out1002           --------------------------------------GGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out1004           --------------------------GAAAAACGTACAGGGTCTTCCCGC
GCA_000004655.2_ASM465v1_rm.out1007           -------------------------GAGAGACGTCTAGGGATATTCCGGT
GCA_000004655.2_ASM465v1_rm.out1016           -----------------------------------------------GGC
GCA_000004655.2_ASM465v1_rm.out1042           -------------------------GAGAAACGTCTAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1088           ------------------------------ACGTCCAGGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1208           ----------------------GACAAACACCCATGGGTCGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1209           ----------------------GACAAACACCCATGGGTCGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1213           ------------------------------ACGACCTGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1243           -------------------------GAGAAACGCCTATCGATTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out1267           --------------------------AGAAACACCTTGGGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1339           ------------------------GAGAAACGTACAGGGGGTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out1357           --------------------------AGAAACGTCTATGGGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out1396           -------------------------GAGAAACGTCTAGGGGTCATTCGGC
GCA_000004655.2_ASM465v1_rm.out1428           ---------------------------GAAAATCATCAGGGTCTTCCGAC
GCA_000004655.2_ASM465v1_rm.out1447           -------------------------GAGAAACACCTAGGGGTCTTTCTGC
GCA_000004655.2_ASM465v1_rm.out1451           -------------------------GAGAAACATCCAGTGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1548           -------------------------------------GAGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1558           -------------------------GAGAAACGTTCAGGAGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1591           --------------------------GAGAAACGTCCCGGGTCTTCCGTC
GCA_000004655.2_ASM465v1_rm.out1607           -----------------------------AACGTCTAGGAGTATTCCGGC
GCA_000004655.2_ASM465v1_rm.out1613           -------------------------GAGAAACGCCCAAGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1623           -------------------------GAGAAACGCCCAGGGATTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1642           -----------------------------------------TCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1658           ------------------CTGAAGGGAGAAACGTCCTGGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1659           -------------------------GAGAAACGTTCAGGGGTTTTCCGAT
GCA_000004655.2_ASM465v1_rm.out1846           -------------------GA--GAAACGTCCACAGCCGGGTTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out1901           ---------------------------GAGAAACGCCCTGAAGTTTTTGG
GCA_000004655.2_ASM465v1_rm.out1906           -------------------------GAGAAACATCCAGAGGTCTTTTGGC
GCA_000004655.2_ASM465v1_rm.out1947           -------------------------GAGAAACATTATTGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out1950           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1956           ----------------------------------CCCGGGGTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out1979           -------------------------GAGAAAGGCCCAGGGGTCTTCCGAC
GCA_000004655.2_ASM465v1_rm.out2010           -------------------------GGGAAACACCCAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2030           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2040           --------------------------GAGAAACGCCTAGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2046           -------------------------GAGAAATGACCAGGTGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2054           -------------------------GAGAAGCATTCACGGATCATTCGGC
GCA_000004655.2_ASM465v1_rm.out2071           -------------------------GAGAAATGTCCAGAGTTATTCTGGC
GCA_000004655.2_ASM465v1_rm.out2076           -------------------------GAGAAATGTCCAGAGTTATTCTGGC
GCA_000004655.2_ASM465v1_rm.out2162           ---------------------------GAGAAACACCTAGGTATTCCAGC
GCA_000004655.2_ASM465v1_rm.out2192           --------------TGAGAAA--CACCTAGGGGTCCTCCGGCTTACTGAC
GCA_000004655.2_ASM465v1_rm.out2196           ----------------------------------------TGTGA----T
GCA_000004655.2_ASM465v1_rm.out2237           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2238           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2276           -------------------------GAGAAACGTCCAGGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2283           -------------------------GAGAAATGTCCAGGGGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out2329           -------------------------GAGAAACGTCTAAGAGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2374           ------------TTTGCTTTGTGCTGAGAAACGTCTAGGGGTCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out2376           ---------------------------------GGTCTT--CTGGCTAGC
GCA_000004655.2_ASM465v1_rm.out2378           ------TTGTCCTGAATGGCACTTTGAGAAACGCCTAGGGATTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2380           -----------------------TCGAGAAACATCTAGGGGTTTTCCGAC
GCA_000004655.2_ASM465v1_rm.out2392           -------------------------------------GGGGTCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out2395           ----------------------------AAACGTCTAGAGGTGTTTCAGC
GCA_000004655.2_ASM465v1_rm.out2415           -------------------------GAGAAACGCCCCGGAATTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out2441           ------------------------TGAGAAAGGCCTGGGGGTCTCCTGGC
GCA_000004655.2_ASM465v1_rm.out2462           -------------------------GAGAAACACGCAGGGGTATTCCGGC
GCA_000004655.2_ASM465v1_rm.out2468           -------------------------GATAAACATTTAGGGATCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out2495           -------------------------GAGAGACATCCAGGGATTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2514           -------------------------GAGAAACACCCTGGGGCCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out2528           -------------------------GAGAAACGTCCTGTTGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out2545           --------------------------AGAAACGTCCAGGGGTTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out2586           -------------------------GGGAAACGTCTATGGATTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out2589           ------------------------------------------TTTTCCGG
GCA_000004655.2_ASM465v1_rm.out2591           -------------------------GAGAAATATCCGGGGGTTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out2695           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2703           -----------------------------------------TTTTCGAGC
GCA_000004655.2_ASM465v1_rm.out2724           --------------------------GAGAAACGTCCTTGGTCTTCCGAC
GCA_000004655.2_ASM465v1_rm.out2778           -------------------------GAAAAACGTCCATTAGTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out2800           ---------------------AATAGAGAAACGGCCAG-----------A
GCA_000004655.2_ASM465v1_rm.out2811           ------------------------AGAAAGATCCAAAGGTCTCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out2866           ----ATTATTTGATTGGTGAGATAAGAAACACACCTAGGGGTTTTCCGGT
GCA_000004655.2_ASM465v1_rm.out2977           ----------------------------TCGATAAACGCCCAGTGGTCTT
GCA_000004655.2_ASM465v1_rm.out3072           ------------------------AGAAACGTATAGGGG--TCTAACGGC
GCA_000004655.2_ASM465v1_rm.out3073           -------------------------GAGAAACGCCCATGAATATTTTCGC
GCA_000004655.2_ASM465v1_rm.out3106           ----------------------------AAACACCCAGAGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3111           -------------------------GAGAAACGTCTAGG--GTGTTTGGG
GCA_000004655.2_ASM465v1_rm.out3121           -------------------------GAGAAACGCTTAAGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3279           ---------------------------------TCCCAGGTTCTTCTGAC
GCA_000004655.2_ASM465v1_rm.out3323           ------------------------------------------------GC
GCA_000004655.2_ASM465v1_rm.out3327           -------------------------GAGAAACGCCTAAGGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3376           ---AAACGTCC-------------------------ATGATTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out3388           ---------------------------GAAACGTTCTAGAGTCTTC----
GCA_000004655.2_ASM465v1_rm.out3390           -------------------------GAGAAACGTTCCAAAATTTTCCAGG
GCA_000004655.2_ASM465v1_rm.out3444           -------------------------GAGAAACTTTCAGGGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3446           -----------------------GATAAACATCCAGGGG--TATTCCGGC
GCA_000004655.2_ASM465v1_rm.out3494           --------------------------AGAAACGTCTAGGGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out3555           -------------------------GAGAAACGTCCAGGGGTTTTCTGGT
GCA_000004655.2_ASM465v1_rm.out3579           -------------------------GAGAAACGCCTAGGGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out3603           -------------------------GATAAACGCCTAGGGAATTTCCGAA
GCA_000004655.2_ASM465v1_rm.out3653           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3654           -------------------------GAGAAACATACAGGGGTCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out3682           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3683           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3857           -----------------------------GAAACATCCAGAAGTTTTGGC
GCA_000004655.2_ASM465v1_rm.out3866           -------------------------GAGAAACGTCCAAGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3900           ------------------AGAAAGGTTGAGCGGTTTTCAGGCTAGGCGGC
GCA_000004655.2_ASM465v1_rm.out3901           -------------------------GAGAAACGCCTAGGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3914           -------------------------GAGAAACGTCCAATGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out3917           -------------------------GAGAAACGTCCAGAGGTATTCCGGC
GCA_000004655.2_ASM465v1_rm.out3974           -------------------------GAGAAACGTCCATGGGTTTTACGGC
GCA_000004655.2_ASM465v1_rm.out4017           -------------------------GAGAAACGTCTAGGGGTTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out4076           -------------------------GAGAAATACCCATGGGCTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out4091           -------------------------GAGAAACTCCCAGGGGTCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out4186           -------------------------GAGAAACACCCAGGGATCTTATGAA
GCA_000004655.2_ASM465v1_rm.out4187           -------------------------GAGAAACACCCAGGGATCTTATGAA
GCA_000004655.2_ASM465v1_rm.out4258           -------------------------GAGAAATGCCCATGAGTCTTCCGGT
GCA_000004655.2_ASM465v1_rm.out4377           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4390           ---------------------------AGAACACTTAGGGATCTTTTGGC
GCA_000004655.2_ASM465v1_rm.out4484           ------------------------GAGAAACATCCTAACGTTCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out4489           --------------------------GAGAAAGGTCCGGGGTCTTCCGAC
GCA_000004655.2_ASM465v1_rm.out4490           ---------------------------AGAAAGGTCCGGGGTCTTCCGAC
GCA_000004655.2_ASM465v1_rm.out4526           -------------------------GAGAAACACCCGGGGGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out4558           ---------------------------------------------CCAGC
GCA_000004655.2_ASM465v1_rm.out4570           ---------------------------------------GGTTTTCCGAC
GCA_000004655.2_ASM465v1_rm.out4615           ---------------------------AGAAATGTCCAGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out4660           -------------------------GAGAAACGCCCAAAGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out4662           --------------------------AGAAACACCAAGGGGTATTTCGGC
GCA_000004655.2_ASM465v1_rm.out4672           -----------------------TTTAAAAACACCTAGGGGTATTCTGGC
GCA_000004655.2_ASM465v1_rm.out4673           ----------------------------AAATGACTAGGGGTTTTCTGAC
GCA_000004655.2_ASM465v1_rm.out4689           ----------------------------AAACGTCCTGGGGTCTTTCGAC
GCA_000004655.2_ASM465v1_rm.out4727           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4779           --------------------G--AGAAATGCCTAGGGCATTTCTGGTGGC
GCA_000004655.2_ASM465v1_rm.out4831           --------------------------AAAAACGGCAAGAGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out4833           --------------------------AGAAACGCCCAGAGATTTTTCGGT
GCA_000004655.2_ASM465v1_rm.out4858           --------------------------------------GAGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out4861           ------------------------GAGAAACACCCAGCG--GTTTTCTGG
GCA_000004655.2_ASM465v1_rm.out4885           -----------------------GAGAAACACCTAGGGG--TTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out4963           -------------------------GAGAAACGTCCAAGGGTCTTCTAGC
GCA_000004655.2_ASM465v1_rm.out5017           -------------------------GAGAAACACCCAGGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5023           --------------------------GAGAAACATCCGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5080           -------------------------GAGAAACGCCCAGGGATCATCCGAC
GCA_000004655.2_ASM465v1_rm.out5095           -----------------------TCGAGAAATGTATAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5135           -------------------------GAGAAACGTATAGGGGTTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5152           -------------------------GAGAAACGTCTAGAGATTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5194           -------------------------GAGAAACGTTCAGGGGTATTCCGGC
GCA_000004655.2_ASM465v1_rm.out5216           --------------------------GAGAAACATCCAGGGTTTTTTAAC
GCA_000004655.2_ASM465v1_rm.out5219           ----------------------------------------GGTCTTC---
GCA_000004655.2_ASM465v1_rm.out5240           ---------------------------------------------CCTGT
GCA_000004655.2_ASM465v1_rm.out5271           --------------------------GAGAAACCACCATGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5272           -------------------------GAGAAACGTCTAGTGGTGTTCCGAC
GCA_000004655.2_ASM465v1_rm.out5279           -------------------------GAGAAATACCCGGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5418           -------------------------GAGAAACGTTCAGAGATTTTCCGGC
GCA_000004655.2_ASM465v1_rm.out5435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5441           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5454           --------------------------AGAAACACCGAGGGGTCTTCAAGC
GCA_000004655.2_ASM465v1_rm.out5656           GAGAAACGTCCAGGAGTTTTT--TTTGGCTAGCTTCATAAAAGAGAACTG
GCA_000004655.2_ASM465v1_rm.out5661           --------------------------GAGAAAAGCCTAGGGTTTTTCAGC
GCA_000004655.2_ASM465v1_rm.out5668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5721           -------------------GAGAAAGGCCCTGGTCTTCCGGCTAGCTAGC
GCA_000004655.2_ASM465v1_rm.out5743           -------------------------GAGAAATGTCTAGGGGTGTTCCGCC
GCA_000004655.2_ASM465v1_rm.out5744           -------------------------GAGAAATGTCTAGGGGTGTTCCGCC
GCA_000004655.2_ASM465v1_rm.out5748           -------------------------GAGAAACACCCTGGGGTCTTCCAGC
GCA_000004655.2_ASM465v1_rm.out5776           -------------------------GAGAAACGCCCAGGGGTTTTTTGGC
GCA_000004655.2_ASM465v1_rm.out5777           -------------------------GAGAAACGCCCAGGGGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out5856           ------------------------AAAAAAGTCTAGGGG--TCTTTCTGC
GCA_000004655.2_ASM465v1_rm.out5947           ----------------------------GAGAAACACCCAAGGGTCTTCC
GCA_000004655.2_ASM465v1_rm.out6004           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6015           --------------------------AGAAACACACGTGGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6037           --------------------------AGAAACATTCAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6078           ---------------------------GAGAAACGCCCGGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6112           -------------------------------------------------C
GCA_000004655.2_ASM465v1_rm.out6152           ----------------------------AGAAACACCCGGGTGTTTTCTA
GCA_000004655.2_ASM465v1_rm.out6153           -------------------------GAGAAACGCCCAGGAATTTTTT---
GCA_000004655.2_ASM465v1_rm.out6159           -------------------------GAGAAACGCCCTGGGGTATTCCGGC
GCA_000004655.2_ASM465v1_rm.out6257           -------------------------GAGAAACGTCCAGGGGTCTTCCGGT
GCA_000004655.2_ASM465v1_rm.out6271           -------------------------GAAAAACACCCCGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6286           -------------------------GAGAAACACCCTTGGGTCTTTGAGC
GCA_000004655.2_ASM465v1_rm.out6295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6298           -------------------------GAGAAACGTAAAGAGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6299           -------------------------GAGAAACGTAAAGAGATCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6301           ----------------------------------TGGGGCAGTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out6317           -------------------------GAGAAATGCCCAGGGGTCTTCCAGC
GCA_000004655.2_ASM465v1_rm.out6342           ------------------------TGAGAAAGGCCCGGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6376           -------------------------------------GGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6378           --------------------------AAACATCTGGGGG--TCTTTCGGC
GCA_000004655.2_ASM465v1_rm.out6486           -------------------------GAGAAACGCCCACGTATCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out6490           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6548           -------------------------GAGAAACGCCTAGAGGTTTTCCGGT
GCA_000004655.2_ASM465v1_rm.out6559           -------------------------GAGAAACGCCCGGGGGTCTTCAGCC
GCA_000004655.2_ASM465v1_rm.out6564           -------------------------GAGAAACACTCAGGCGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out6581           ------------------------------GAGAAATGTCGTCTTCCGGT
GCA_000004655.2_ASM465v1_rm.out6588           -------------------------GGGAAGCATCGAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6654           -------------------------GAGAAACATCCGGAGATCTTCTGGC
GCA_000004655.2_ASM465v1_rm.out6691           ---------------------------------TCCAAGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6695           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6724           -------------------------GAGAAATGTCCGGGAGTTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out6733           -------------------------GAGAAACATCTAGGGGTATTCTGGC
GCA_000004655.2_ASM465v1_rm.out6736           -------------------------GAGAAATGTCTAGGGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out6742           -------------------------GAGAAACGCCCAGAGGTCTTCCAGC
GCA_000004655.2_ASM465v1_rm.out6752           ---------------------------GAGAAACACCCAGGGGCTTCGGC
GCA_000004655.2_ASM465v1_rm.out6753           -------------------------GAGAAACATCATCGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out6840           -----------------------GAGAAACGCCTAGGGG--TTTTCTGGC
GCA_000004655.2_ASM465v1_rm.out6889           -------------------------GAGAAACACACGG-----------G
GCA_000004655.2_ASM465v1_rm.out7009           -------------------------------------GGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out7109           -------------------------------------G-----------T
GCA_000004655.2_ASM465v1_rm.out7150           ------------------------GAGAAACGTCTTAGGCGTCTTCCAGC
GCA_000004655.2_ASM465v1_rm.out7189           --------------------------AGAAACGTCCAGTGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out7196           -------------------------GAAAAACGCCTAAGGATTTT----C
GCA_000004655.2_ASM465v1_rm.out7435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7520           -------------------------GAGAAACACCTAGGAATCTTTTGGC
GCA_000004655.2_ASM465v1_rm.out7521           --------------------------GAGAAATGCTTATGGTCTTCCAGC
GCA_000004655.2_ASM465v1_rm.out7540           ----------CACTCGCTCGC--ACTGAGAAACACCCAGAGTCTTCTAGC
GCA_000004655.2_ASM465v1_rm.out7575           ----------------------------AATATCCTAGGAGTCTTCCGGT
GCA_000004655.2_ASM465v1_rm.out7585           -------------------------GATAAATGTATAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out7586           -------------------------GAGAAACGTC-TAGGGTTTTTCGGC
GCA_000004655.2_ASM465v1_rm.out7618           -------------------------GAGAAACGTCTAGGGGTTTTCCGAC
GCA_000004655.2_ASM465v1_rm.out7633           -----------------------GAGAAACGAGACCAGGGGTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out7713           -------------------------GAGAAACGTCAATGGCTCTTCCGGC
GCA_000004655.2_ASM465v1_rm.out7715           --------------------------------------------TCCGAC
GCA_000004655.2_ASM465v1_rm.out7727           -------------------------GAGAAACTCCTAGGGATTTTCCAGC
GCA_000004655.2_ASM465v1_rm.out7759           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7770           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4     -------------------------GAGAAACGCCTAGGGGTCTTCCAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out15    ------------------GAGA-AACGCCTAGGGTTCTT--CCGGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out27    -------------------------GAGAAACGAGCGCGGGTCTT----C
GCA_000576065.1_Oryza_nivara_v1.0_rm.out46    -----------------------GAGAAACGTCCAAGGA--TTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out61    -------------------------GAGAAGGCCCCTGGGGTATTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out89    -------------------------GAGAAACGACCAGGGATCTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out173   --------------------------------------------AAACGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out257   -------------------------GAGAAACGTACAGGGGGTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out265   -------------------------GAGAAACGTTTAGGGTCTTTCCTAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out327   -------------------------GATAAGCGCCTAGAGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out386   -------------------------GAGAAACGTATATGGGTCTTCCAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out469   ----------------------------AATATCCTAGGAGTCTTCCAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out537   ------------------------GAGAAACGTTTAGAG--TTTTTCGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out574   -----------------------GAGAAACACCCAGGGG--TCTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out576   -------------------------GAGAAACGTCTAGTGGTGTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out577   --------------------------GAGAAACCACCATGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out677   -------------------------GAGAAACGTCCAAGGGTCTTCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out679   -------------------------GAGAAACACCCAAGGGTTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out695   --------------------------AGAGATGCCCAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out736   -------------------------GAGAAACGTCCATGGGTCTTCCTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out743   -------------CAGTTGTCCATCAAGAAACTTCTAGGACTCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out749   ---------------------G-AGAAACGCCCAGGGTTTTTTTTGGCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out757   ------------------------GAGAAATGTCTATGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out781   -----------------------------------------TTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out795   -----------------------GGGAAACACCCACGGC--TCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out829   ----------------------------GAGAAACATCCAGTGATTTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out855   -------------------------GAGAAACTTCTAGTGGTTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out871   -------------------------------------GGGGATTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out876   ---------------------G-AGAAATGTCTTAGGGG--TCTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out897   -----------------------TGAGAAACGCCTAGGG--GTTTTCTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out922   -------------------------GAGAAAGGCCCGGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out957   -------------------------GATAAACATTTAGGGATCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1052  -------------------------GAGAAACGCCCACGTATCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1055  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1079  -------------------------GAGAAACTCCTAGGGATTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1116  ------------------------------GAGAAATGTCGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1122  -------------------------GGGAAGCATCGAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1149  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1155  --------------------------AGTAACGCCTAAGGGTCTTATGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1177  -------------------------GAGAAATATCAAGGGATCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1182  -------------------------GAAAAACACCCGGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1223  -------------------------GAGAAACATCCGGAGATCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1282  -------------------------GAGAAATGACTAGGGGTTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1285  -------------------------GAGAAACATCTAGGGGTATTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1298  ------------------------GAGAAACACCCAGGG--GCCTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1299  --------------------------GAGAAACATCCGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1400  -----------------------GAGAAACGCCTAGGGG--TTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1551  -------------------------------------GGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1586  --------------------------AGAAACGTCTATGGGTTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1607  -------------------------GAGAAAGGCCCAGGGATCTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1630  -------------------------------------G-----------T
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1719  -------------ATCATTAG--CCTGAGAAACGTCCCAGGTTTTCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1727  -------------------------GAGAAAC-------ACCCAA----G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1728  -------------------------GAAAAACGCCTAAGGATTTT----C
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1749  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1821  -----------------------GAGAAACGTCCAAGGA--TCTTCCGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1979  -------------------------GAGAAACACCCAACGGTATTCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2042  -------------------------GAGAAACGCCCAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2067  -------------------------GATAAATGTATAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2068  -------------------------GAGAAACGTCTAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2104  -------------------------GAGAAACGTCTAGGGGTTTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2117  -----------------------GAGAAACGAGACCAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2146  -----------------------TTGAGAAACTCCCCAGAGTCTTCCGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2154  ---------------------------------------GGTTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2156  -------------------------GAAAAACGTACAGGGGTCTTCCCGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2159  -------------------------GAGAAACATCTAGGGATATTCCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2168  -------------------------GAGAAACACCCAGGGGTCTTCCAAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2206  -------------------------GAGAAACGTCCAGGGGTCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2261  ------------------------------ACGTCTAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2330  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2338  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2359  ----------------------GACAAACACCCATGGGTCGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2366  ------------------------------ACGACCTGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2399  ---------------------------GAGAAACGCCCGATTTTTCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2430  -------------------------GAGAAACACCTTGGGATCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2472  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2484  -------------------------GAGAAACGTCCAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2501  -------------------------GAGAAACGTACAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2507  -------------------------GAGAGACGCAGAGGGGTTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2552  -------------------------GAGAAACGTCTAGGGGTCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2598  ------------------------AGAAACGTATAGGGG--TCTAACGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2603  -----------------------GAGAAATATCTAGGGG--TTTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2616  -------------------------GAGAAACACCTAGGGGTCTTTCTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2620  -------------------------GAGAAACATCCAGTGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2732  -------------------------------------GAGATCTTCCGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2733  ---------------------------GAAAATCATCAGGGTCTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2741  -------------------------GAGAAACGTTCAGGAGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2769  -----------CATTTATACT--TAAGAGAAACGTCCAGGGTCTTCCGTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2788  ---------------------------AACGTCTAGGAG--TATTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2808  -------------------------GAGAAACGCCCAGGGATTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2827  -------------------------------------------TTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2847  ------------------CTGAAGGGAGAAACGTCCTGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2848  -------------------------GAGAAACGTTCAGGGGTTTTCCGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2892  -------------------------GAGAAACTTAGGGG--TTTTTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2924  -------------------------GAGAAACATTATTGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2950  -----------------------TCGAGAAACACCCATGAGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2960  -----------------------------------TGGAGTTCTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3015  -------------------GA--GAAACGTCCACGGCCGGGTTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3069  -------------------------GAGAAACATCCAGAGGTCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3116  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3124  ----------------------------------CCCGGGGTCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3182  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3185  -------------------------GAAAAACGTCCATTAGTCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3191  --------------------------GAGAAACGCCTAGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3200  -------------------------GAGAAGCATTCACGGATTATTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3216  -------------------------GAGAAATGTCCAGAGTTATTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3262  -------------------------GAGAAACATCCAAGGGTATTCCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3296  -------------------------GAGAAACGCCCAGGAATTTTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3297  ----------------------------AGGAACACCCGGGTGTTTTCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3343  --------------TGAGAAA--CACCTAGGGGTCCTCCGGCTTACTGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3347  ----------------------------------------TGTGA----T
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3372  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3403  -------------------------GAGAAATGTCCAGGGGTTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3444  -------------------------GAGAAACGTCCAAGAGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3470  ----------TTTGCTTTGTG--CTGAGAAACGTCAAGGGGTTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3471  --------------------------------GGGTCTT--CTGGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3473  ------TTGTCCTGAATGGCACTTTGAGAAACGCCTAGGGATTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3479  -----------------------TCGAGAAACATCTAGGGGTTTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3486  -------------------------------------GGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3489  ----------------------------AAACGTCTAGAGGTGTTTCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3508  -------------------------GAGAAACGTCCCGGAGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3533  ------------------------TGAGAAAGGCCTGGGGGTCTCCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3544  -------------------------GAGAAACGTCGAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3556  -------------------------GAGAAACGTCCATGGGTTTTACGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3564  -------------------------GAGAAACGCGCAGGGGTATTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3590  -------------------------GAGAGACATCCAGGGATTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3606  -------------------------GAGAAACACCCTGGGGCCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3629  --------------------------AGAAACGTCCAGGGGTTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3673  -------------------------GGGAAACGTCTATGGATTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3684  ------------------------------------------TTTTCCGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3686  -------------------------GAGAAATATCCGGGGGTTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3766  -----------------------------------------TTTTCGAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3816  -------------------------GGGAAACACCCAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3840  ------------------------AGAAAGATCCAAAGGTCTCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3879  -------------------------GAGAAATGCCCACGGATTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3930  -------------------------GAGAAACACCCAGGGGTTTTCCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4054  -------------------------GAGAAACGCCCAGGAATATTTTCGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4086  ----------------------------AAACACCCAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4091  -------------------------GAGAAACGTCTAGG--GTGTTTGGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4099  -------------------------GAGAAACGCTTAAGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4122  -------------------------GACAAACGTCCAGGGGTATTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4132  ---------------------------------TCCAAGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4135  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4159  -----------------------GAGAAACACCTAGGGG--TTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4169  -------------------------GAAAAACGTATAGGGATCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4252  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4283  --TCATTTGTCTTAGAATTTA--GATGGTCATAAATAAGATCTGAAGAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4287  -------------------------GAGAAACGCCTAAGGATCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4297  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4338  ---------------------------GAAACGTCCTATAGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4341  -------------------------GAGAAACGTTCCAAGATCTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4401  -------------------------GAGAAACTTTCAGGGATCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4403  -----------------------GAGAAACATCCAGGGG--TATTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4430  --------------------------AGAAACGTCTAGGGGTTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4446  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4454  --------------------------AGAAACGTCTAGGGGTTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4484  -------------------------GAGAAACGTCCAGGGGTTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4533  -------------------------GATAAACGCCTAGGGAATTTCCGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4596  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4639  -------------------------GAAAAACGCCCAGGGGTTTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4763  ---------------------------GGGAAACGTCCAGAAGTTTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4775  -------------------------GAGAAACGTCCAAGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4801  -------------------------GAGAAACGCCTAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4819  -------------------------GAGAAACGTCCAATGGTCTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4822  -------------------------GAGAAACGTCCAGAGGTATTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4858  -------------------------GAGAAATGTCCGGAAGTTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4918  --------------------------AGAAATGCCGAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4928  -----------------------GAGAAACGTCTAGGGG--TTTTCCAAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4956  ----------------GAGAA--ACGCCTAAGGGTTTTTCACTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4980  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4987  ------------------------GAGAAACTTCTAGGGTCTTTCGGCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4999  ------------------------AAAAACGGCAAGAGG--TTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5071  -------------------------GAGAACCACCCAGGGATCTTATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5135  ------------------------------------GAG--TCTTCCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5289  ---------------------------AGAACACTTAGGGGTCTTTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5382  --------------------------GAGAAAGGTCCGGGGTCTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5430  ------------------------------------------TTCCGGCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5461  ---------------------------------------GGTTTTCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5507  -------------------------GAGAAACGCCCAGAGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5509  --------------------------AGAAACACCTAGGGATATTTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5520  ----------------------------AAATGACTAGGGGTTTTCTGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5544  ----------------------------AAACGTCCTGGGGTCTTTCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5582  --------------------------AAACATCTGGGGG--TCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5602  --------------------G--AGAAACGCCTAGGGCATTTCTGGTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5640  ---------------------------GAGAAACACGTGGGGTTTTTTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5684  ------------------------GAGAAACATCCAGCG--GTTTTCTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5762  -------------------------GAGAAACACCCAGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5779  --------------------------GAGAAATGTCCAGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5791  -------------------------GAGAAACGTCCAAGGGTCTTCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5872  -----------------------GAGAAACGCAAAGGGG--TTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5887  -------------------------GAGAAACGCCCAGGGATCATCCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5898  ------------------------TCGAGAAATATCTAGGGTTTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5920  --------------------------GAGAAATGCTTATGGTCTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5955  -------------------------GAGAAACGCCCAGGGGTCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5956  -------------------------GAGAAACGTATAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5984  -------------------------GAGAAACGTCTAGAGATTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6043  ---------------------------GAGAAACATCAGGGTTTTTCAAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6090  -----------------------GAGAAAGTCCCATTGGTTTTTAGTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6092  -------------------------GAGAAATACCCGGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6209  -------------------------GAGAAACGTTCAGGGGTTTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6238  -----------------------GAGAAACACCGAGGGG--TTTTCAAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6341  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6413  -------------------------GAGAAATGACTAGGGGTCTTCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6447  GAGAAACGTCCAGGAGTTTTT--TTTGGCTAGCTTCATAAAAGAGAACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6451  --------------------------GAGAAAAGCCTAGGGTTTTTCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6454  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6518  ------------------AGAAAGGTTGAGCGGTCTACCGGCTAGGTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6539  -------------------------GAGAAATGTCTAGGGGTGTTCCGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6552  -------------------------GAGAAAAGTCCAGGAGTTTTCCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6562  ------------------------GAGAAATGCCCAGGGGTTTTTTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6578  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6622  ------------------------AAAAAAGTCTAGGGG--TCTTTCCGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6644  -------------------------GGGAAACGCCCAAGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6767  ------------------------TGAGAAACACACGTGGATCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6827  ---------------------------GAGAGACGCCCGGATCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6866  ------------------------------------GGG--TCTTTCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6906  -------------------------GAGAAACGCCCTGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7004  -------------------------GAGAAACGTCCAGGGGTCTTCCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7018  -------------------------GAAAAACACCCCGGGGTCTTCCGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7047  -------------------------GAGAAACGTAAAGAGATCTTCCGGC

GCA_000004655.2_ASM465v1_rm.out4              TAGCACC----------ACAAGATAGTGTGCTAGACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out47             TAGCTCC-AC---------AAGATAGTGGGCTAGACG-----ATATGGAT
GCA_000004655.2_ASM465v1_rm.out64             TAGCACCAC-AAGG----TA-----GTGGGCTAGCCG-----GTCCGGGT
GCA_000004655.2_ASM465v1_rm.out94             TAGCTCC-AC---------AAGGTGATGGGCTAGACG-----GCCTAGGT
GCA_000004655.2_ASM465v1_rm.out114            ----------A--------A-----A-TGGCTTGCCA-----A-------
GCA_000004655.2_ASM465v1_rm.out117            TAGCTCC-AT---------AAGATGGTGGGCTAGACG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out158            --GTCTTCCGGTCA----TAAGGTGGTGGGTTAGACG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out242            TAGCTCC-AC---------GATGTGGTGGGCTAAATG-----ATCTGAGT
GCA_000004655.2_ASM465v1_rm.out248            TAGCTCC-AC---------AATGTGGTGGGCTAGATG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out269            ------------------------------------C-----GACCTGGT
GCA_000004655.2_ASM465v1_rm.out338            ------C----------AAGGTGTGATGGGTTAGACG-----ACCTAAAT
GCA_000004655.2_ASM465v1_rm.out343            -------------G-----ATGGTGGGTTAGCCTGCC-----TAGCTAGT
GCA_000004655.2_ASM465v1_rm.out447            TAGCTAC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGTT
GCA_000004655.2_ASM465v1_rm.out608            TAGCTTCACAAGTT-----AAGATGATGGGTTAAACA-----ATCTGGAT
GCA_000004655.2_ASM465v1_rm.out619            TAGCTCC-AC---------AAGGTGGTAGGCTAGCTG-----GCCTAAAT
GCA_000004655.2_ASM465v1_rm.out631            TAGCTCC-AC---------AAAATAATGGGCTAGACG-----ACATAGAT
GCA_000004655.2_ASM465v1_rm.out652            TAGCTTC-AC---------AAGGTGGTGTGCTAGATG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out684            TAGCTTC-AT---------AGGGTGATGGGCTAGTTG-----GCCTGGGT
GCA_000004655.2_ASM465v1_rm.out747            TAGCTTC-AT---------AAGTTGGTGGTCTAGTTG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out748            TAGCTTC-AT---------AAGTTGGTGGTCTAGTTG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out750            TAGCTCC-AC---------AAGGTGGTGGGCTAGATG-----ACTTAGGT
GCA_000004655.2_ASM465v1_rm.out765            TAGCTCC----------ACAAAATGGTGGGCTAGATG-----ACCTGGTT
GCA_000004655.2_ASM465v1_rm.out801            TAGTTCT-AT---------AAGGTGGTGGGCTAGACG-----ACCTGAAT
GCA_000004655.2_ASM465v1_rm.out807            TAGATTC-AC---------ATGGTGGTGGGCTAGACG-----ATCTGAGT
GCA_000004655.2_ASM465v1_rm.out809            TAGATTC-AC---------ATGGTGGTGGGCTAGACG-----ATCTGAGT
GCA_000004655.2_ASM465v1_rm.out824            T--------AGCTCT--GTAAGGTGGTGGGTTACACA-----AATTAGAT
GCA_000004655.2_ASM465v1_rm.out850            TAGCTTC-AC---------AAGGTGGTGGGCTAGATG-----ATTTAGGT
GCA_000004655.2_ASM465v1_rm.out865            TAGCTCCACA-------------AGGTGGGTTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out899            TAGTTTCATATGGTG----------GTGGATTAGCCG-----ATCTGGAT
GCA_000004655.2_ASM465v1_rm.out911            TAGTTTTATAAGTTA----------GTGGGCTAGCTA-----GTCTGGAT
GCA_000004655.2_ASM465v1_rm.out928            TAGCTCC-AC---------AAGGTGGTGGGCTA-GACG----ACCTAGAT
GCA_000004655.2_ASM465v1_rm.out942            TAGCTTC-AC---------AAGGTGGTGGGTTAGTTG-----AGCTGGAT
GCA_000004655.2_ASM465v1_rm.out968            CTAGCTC-AC---------AAGGTGGTGGGCTAGTCG-----GCATGGGT
GCA_000004655.2_ASM465v1_rm.out1000           TAGCTGC-AC---------AAGGTGATGGGCTAGACG-----ACTTGGAT
GCA_000004655.2_ASM465v1_rm.out1002           TAGCTCCAC---AAG--C--------TGAGTTAGCCG-----GTCTGGAT
GCA_000004655.2_ASM465v1_rm.out1004           TAGCTTC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1007           TAGCTTC-AC---------AAGGTGGTCGGTTAGCCTGACCGGTCTGGGT
GCA_000004655.2_ASM465v1_rm.out1016           TAGCTCC-AC---------GATATGGTGGGCTAAGCG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out1042           TAGCTTC-AC---------GGGGTGGTGGGCTA-GATG----ACCTGAGA
GCA_000004655.2_ASM465v1_rm.out1088           TAGCTTC-AC---------AAGGTGGTGGGCTAGTCT-----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out1208           TAGCTCC-AC---------AAGGTAGCGGGCTAAATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1209           TAGCTCC-AC---------AAGGTAGCGGGCTAAATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1213           TAGCTTC-AC---------AAGGTGGTGAGCTAGATG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out1243           TAGTTTC-AC---------AAGGTGATGTGCTAGTCG-----GCCTGGGT
GCA_000004655.2_ASM465v1_rm.out1267           TAGCTTC-AT---------AAGGTGGTGGGCTAGATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1339           TAGCTTC-AT---------ATGGTGGTGGGCTAGATA-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1357           TAGCTCC-AT---------GAGGTTGTGGGTTAGACG-----AACTGGAT
GCA_000004655.2_ASM465v1_rm.out1396           TAGTTTC-AT---------AAGGTGGTGGGCTAGCCG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out1428           TAGCTTTATAGGGCG----------GTGGGTTGGCCC-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1447           TAGCTTCACAAGGTA--G--------AGGGTTAGACG-----ACATAGGT
GCA_000004655.2_ASM465v1_rm.out1451           TACCTCC-AC---------AAGATGGTGGGCTAGACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out1548           TAGTTTCACAATGTG----------GTGAGTCAGATG-----ACTTCGGT
GCA_000004655.2_ASM465v1_rm.out1558           TAGTTCC-AC---------AAGGTAGTGGGCTAGTCG-----GCCTTGGT
GCA_000004655.2_ASM465v1_rm.out1591           TAGCTAC-AC---------AAAATGGTAGGCTAGACG-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out1607           TAGGTTC-AT---------AAGACGGTGGGCTAGACG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out1613           TAGCTTC-AC---------AAGGTGGTGGGCTATACG-----ATCTGAGT
GCA_000004655.2_ASM465v1_rm.out1623           TAGCTCT-AC---------AAGGTGGTGGGCTAGACG-----ACATGGGT
GCA_000004655.2_ASM465v1_rm.out1642           TAGCTCC-AC---------AAGGTGGTGGGTTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1658           TAGCTTC-AC---------AAGGTAGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out1659           TAGCTATACAA--GG--T--------GATGATAGATG-----ATCTAGAT
GCA_000004655.2_ASM465v1_rm.out1846           TAGCTTC-AC---------AAGATGGTGGGCTA-GCTA----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out1901           TAGCTTCATAAGGTG----------GTGGACTAGATG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out1906           TAGCTTC-AC---------AAGGTGGTGGGCTAAACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out1947           TAGCTCCAT----------AAGGTGGTGGGCTAGACG-----AATTAAGT
GCA_000004655.2_ASM465v1_rm.out1950           --------------------AGG------TGGTGAGC-----TAACCGGT
GCA_000004655.2_ASM465v1_rm.out1956           TAGCATCAC-AAGG----TG-----GTGGTCTAGCCG-----GTCAGGGT
GCA_000004655.2_ASM465v1_rm.out1979           TAGTTTC-AC---------AAGATGATGGGCTAGACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out2010           TAGCTTC-AC---------AAGGTCGTAGGCTAGACA-----ATATGGGT
GCA_000004655.2_ASM465v1_rm.out2030           -----TC----------ACAAGATGGTGGGCTAGACG-----ACCTGGGA
GCA_000004655.2_ASM465v1_rm.out2040           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out2046           TAGCTTC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out2054           TAGCCCC-AC---------AAGGTAATGGGCTAGACG-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out2071           TAGCTTA-AT---------AAGGTGGTGAGTTA-GACG----ATCTAAGT
GCA_000004655.2_ASM465v1_rm.out2076           TAGCTTA-AT---------AAGGTGGTGAGTTA-GACG----ATCTAAGT
GCA_000004655.2_ASM465v1_rm.out2162           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out2192           TAGCTCC-AC---------AAGGTGGTAGGCTAGACG-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out2196           GTTCCGACTAGCTGC--ATAAGGTAGCATGCTAGACG-----ACCTGGTT
GCA_000004655.2_ASM465v1_rm.out2237           --------CCTCAC-----AAGGTGGTGGGCTATACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out2238           --------CCTCAC-----AAGGTGGTGGGCTATAAG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out2276           TAGCTCC-AC---------GAGGAGGTGGGCTAGACA-----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out2283           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out2329           TAGCTCC-AG---------AAGGTGGTGGGTTAGCCG-----GCTTGGGT
GCA_000004655.2_ASM465v1_rm.out2374           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out2376           TAGCTTC-AT---------AAGGTGGTGGGCTAGACG-----AACTGGGT
GCA_000004655.2_ASM465v1_rm.out2378           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out2380           TAGCTTC-GC---------AAGGTGGTTGGCTAGACA-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out2392           TAGCTTT-AC---------AAGATAGAGGGCTAAATG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out2395           TAGCTCC----------ACATGATGATGAGCTAGCCG-----ACTTGAAT
GCA_000004655.2_ASM465v1_rm.out2415           TAGCTTC-AC---------AAGGTGGTGGACTAGACG-----ACCTATAT
GCA_000004655.2_ASM465v1_rm.out2441           TAGCATCAC-AAGG----TG-----T-GGGCTAGCCG-----ACCCGGGT
GCA_000004655.2_ASM465v1_rm.out2462           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out2468           TAGCTTCACAAAGTG----------GTGGGCTAGCAA-----TCTGAATT
GCA_000004655.2_ASM465v1_rm.out2495           T--------AACTTC--ATAAGGTGATGGGTTAACCG-----ACCCGAGT
GCA_000004655.2_ASM465v1_rm.out2514           TAGCTCC-AT---------AAGATGGTGGGCTAGACG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out2528           TAGCTTC-AC---------AAGATGGTGGACTA-GCCG----GTCTAAAT
GCA_000004655.2_ASM465v1_rm.out2545           TAGCTTT-AC---------AAGATAGTGGGCTATACG-----ATATGGAT
GCA_000004655.2_ASM465v1_rm.out2586           TAGCTCCATATAAGA---------TGGTGTGTTAGCT-----GGCCTGAA
GCA_000004655.2_ASM465v1_rm.out2589           CTAGCTC----------CAAATGTGATGGGTTAGTCG-----GTCTGGAT
GCA_000004655.2_ASM465v1_rm.out2591           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACT-GGGT
GCA_000004655.2_ASM465v1_rm.out2695           ------C----------ACACAGAGGTGAGCTAGATG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out2703           TAGCTTCAC-AAGA----TACAAGATGGGGTTAGACG-----ATGTAGAT
GCA_000004655.2_ASM465v1_rm.out2724           TAGCTTT-AT---------AAGATGGTGGACTAAACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out2778           TAGCTTC-AT---------AAGGTGATGGGCTAGACG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out2800           GTTCTC------------------ATAAGGTGGTACG-----GCCTGGGT
GCA_000004655.2_ASM465v1_rm.out2811           AAACATCAC-AAGA----TGGTA------GGTAGTC------AGCCAAGA
GCA_000004655.2_ASM465v1_rm.out2866           TAGCTCT-AC---------GAGATGGTGGGCTAGCCG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out2977           TAGCTTC-AC---------AAGATGGTGGGCTAGACG-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out3072           TAGCTTT-AT---------AAGGTGGTGGGCTAGACG-----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out3073           TAACTTCACAGGATA-----------GGGGTTAGCCT-----GTTTGAGT
GCA_000004655.2_ASM465v1_rm.out3106           TAGCTCC-AC---------AAGGTGGTGGGCTGGGCG-----ATCCGGGT
GCA_000004655.2_ASM465v1_rm.out3111           CAGCTCCACA---------AGA-TGGTGGGCTAGATG-----ATCTGGGC
GCA_000004655.2_ASM465v1_rm.out3121           TAGCTTC-AC---------AAGGTGGTGTGATAGACG-----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out3279           TAGCTCC----------ACAAGGTGGTGGGCTAGACA-----AACTGAGT
GCA_000004655.2_ASM465v1_rm.out3323           TAGCTCC-AT---------AAGGTGTTGGGCTAGACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out3327           TAGCTTC-AC---------AAGATGGTGGGCTAGCCG-----ACTTGGTT
GCA_000004655.2_ASM465v1_rm.out3376           TAGCATCTATAAATT----------ATGTGCTAGATG-----ATCTAAGT
GCA_000004655.2_ASM465v1_rm.out3388           -----CGGCTACTTC--ACAATGTGGCGGGCTAGACG-----ATTTGGAA
GCA_000004655.2_ASM465v1_rm.out3390           TAGCTCC-AC---------AAGGTG-GTGGGCACG-------ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out3444           TAGCTTC-AC---------AAGGTGGTGGGATACATG-----ATCTGAGT
GCA_000004655.2_ASM465v1_rm.out3446           TAGCTCT-AT---------AAAATGATAGGCTAGACG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out3494           TAGCTTC----------ATGACATGGTGAGCTAGCCG-----GCTTGAGT
GCA_000004655.2_ASM465v1_rm.out3555           TAGCTCC-AC---------AAGATGGTGAGCTAGATG-----ACTTGAGT
GCA_000004655.2_ASM465v1_rm.out3579           TAGCTCC-AT---------AAGGTGGTGGGCTAGACG-----ATCTGGTT
GCA_000004655.2_ASM465v1_rm.out3603           TAGCTCC-AC---------AAGGTGGTTGGCTAAACG-----ACTTGGAT
GCA_000004655.2_ASM465v1_rm.out3653           -------------T-----GGTAGGTTAGATGATTAG-----GGTTCAAA
GCA_000004655.2_ASM465v1_rm.out3654           TAGCTCC-AC---------AAGGTAGTAGGCTAGACG-----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out3682           ------------------------------------T-----TCTGGGGT
GCA_000004655.2_ASM465v1_rm.out3683           -------------------------GGGTTCGAAGGC-----TCATCGGT
GCA_000004655.2_ASM465v1_rm.out3857           TAGCTCCACAAGGTG----------TTTAGCCGGCCT-----AACAAGGT
GCA_000004655.2_ASM465v1_rm.out3866           TAGCTCC-AC---------AAAGTAGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out3900           TAGCACCAT-AAGG----TG-----GTGGGCTTGCCA-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out3901           TAGCTCA-AT---------AAGGTGGTGGGCTAGGCG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out3914           TAGCTCCACGCCTCC--ACAGGGTGGTGGGCTAAGCG-----ACTTAGAT
GCA_000004655.2_ASM465v1_rm.out3917           TAGTTTT-AT---------AAGGTGGTGGGCTA-GACA----ACCTGAGA
GCA_000004655.2_ASM465v1_rm.out3974           TAGCTTCAT----------ATGGTGGTGGGCTAG----------------
GCA_000004655.2_ASM465v1_rm.out4017           TAGCTCC-AC---------AAGATGGTGGGTTAGCCG-----GCTTGAGT
GCA_000004655.2_ASM465v1_rm.out4076           TAGCTCCAC----------AAGGTGGTGGGCTAGACT-----AACTGGGT
GCA_000004655.2_ASM465v1_rm.out4091           TAGCTCC-AC-------GAGGTGTGGTGGGCTAGACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out4186           TATCTTC-AC---------AAGGTGGTGGGTTAGACG-----ACTAGGGT
GCA_000004655.2_ASM465v1_rm.out4187           TATCTTC-AC---------AAGGTGGTGGGTTAGACG-----ACTAGGGT
GCA_000004655.2_ASM465v1_rm.out4258           TAGCTTC-AC---------AAGGTGGTGTGCTAGTCG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out4377           -------------------AAGGTGGTTGGTTAGATG-----ACTTGGAT
GCA_000004655.2_ASM465v1_rm.out4390           TAGCTCCTC----------AAGGTGGTGGGTTAGATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out4484           TAGCTCCATAAAAT----------TGTGGGCTAGCCA-----GTCTGGGT
GCA_000004655.2_ASM465v1_rm.out4489           TAGCACGAT-AAGG----TG-----T-GGGTTAGTT------GATCAAGT
GCA_000004655.2_ASM465v1_rm.out4490           TAGCACGAT-AAGG----TG-----T-GGGTTAGTT------GATCAAGT
GCA_000004655.2_ASM465v1_rm.out4526           TAGCTAC-AC---------AAGATGGCGGGCTAGCCG-----ATCTGGAC
GCA_000004655.2_ASM465v1_rm.out4558           GTGTTTTAT-AAGA----TG-----GTGGGCTATCTT-----AACTGGGT
GCA_000004655.2_ASM465v1_rm.out4570           TAGCTAC-AC---------AAGGTGGTGGGCTATACG-----ACTTGGAT
GCA_000004655.2_ASM465v1_rm.out4615           TAATTTCACAAGATG----------GTGGGCTAGCTA-----GCCTGATT
GCA_000004655.2_ASM465v1_rm.out4660           TAGCTCCAC----------AAGGTGGTGGGTTAGACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out4662           TAGCTTC-AT---------AAAGTAGTGGGCTAGACG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out4672           CAGCTCC-AC---------GAGGTGGTGGGCTAGACG-----GCCTGGGT
GCA_000004655.2_ASM465v1_rm.out4673           TAGCTTC-AC---------AAGGTGGTGGGCTAGGCA-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out4689           TAGCTCC-AT---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out4727           ------------------------------------------ACCTATGT
GCA_000004655.2_ASM465v1_rm.out4779           CAGCTCC-AC---------AAGGTGGTGGGTTAAACG-----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out4831           TAGCTCC-GC---------AAGATG-GTGGGGACG-------ACCTGTAT
GCA_000004655.2_ASM465v1_rm.out4833           TAGCTTCACCAAAGT----------GATGG------------GCTAGATG
GCA_000004655.2_ASM465v1_rm.out4858           TAGCTCCAGAAGCTCCAGAAGGTGGTGGGTTAGCTCG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out4861           CTAGGTA-CA---------AAGATGGTGGGATAGACG-----ATCTGGAT
GCA_000004655.2_ASM465v1_rm.out4885           TAGCTCCACA---------AGACGGTTGGGCTAGACG-----ACATGGGT
GCA_000004655.2_ASM465v1_rm.out4963           TAGCTAC-AT---------GAGGCGGTGGGCTA-ACCA----GCCTGTGT
GCA_000004655.2_ASM465v1_rm.out5017           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out5023           T--------AGCTCC--ATGAGGTGGTGGACTAAACG-----ACCTG---
GCA_000004655.2_ASM465v1_rm.out5080           TAGTTTC-AC---------AAGATGGTGGATTACG-------ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out5095           TAGCTTCATAGGGTG----------GTGGGTTAGACG-----ACCTC---
GCA_000004655.2_ASM465v1_rm.out5135           TAGCTCC-AC---------AAAGTGGTGGGCTAGCCG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out5152           TAGCTTC-AC---------AAGGTTGTGGGTTA-GATG----ACCTGAGT
GCA_000004655.2_ASM465v1_rm.out5194           TAGC---------------TACCTGTCTAGGTTAGATG----ACCTGGTT
GCA_000004655.2_ASM465v1_rm.out5216           T--------AGCTTC--ACGAGATGATGGGCTAGACG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out5219           -----CAGCTAGCTT--CACAGATGATAGATTAACCG-----ATCTGGAT
GCA_000004655.2_ASM465v1_rm.out5240           TAGCTTC-AC---------AAGGTGATGGACTAGAAG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out5271           TAGCTCTAAGACTA----CGAGATAGTGGATTAGCCG-----ACCTTAGT
GCA_000004655.2_ASM465v1_rm.out5272           TAGCTTC----------ACAAAATGGTGCCCTAGATG-----GCTTGCGT
GCA_000004655.2_ASM465v1_rm.out5279           TAGCTCC-AT---------AAGGTGGTGGGCTAGATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out5418           TAGCTTC-AC---------AAGGTGGTGGGCTACACG-----ACCTGGAT
GCA_000004655.2_ASM465v1_rm.out5435           ---------------------------AAACGCCCAG-----GGTGATCA
GCA_000004655.2_ASM465v1_rm.out5441           ---------------------------AAACGCCCAG-----GGTGATCA
GCA_000004655.2_ASM465v1_rm.out5454           TAGCTCC-AC---------AAGGGGGTGGGTTAGACA-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out5656           AACTTTTATGGTACA----------ATGTACTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out5661           TAGCTTC-AC---------AAGGTAGTGGGCTAGACG-----TCCTGAGT
GCA_000004655.2_ASM465v1_rm.out5668           ----------------------GTGGTGGGCTAGACA-----ACCTAAGT
GCA_000004655.2_ASM465v1_rm.out5721           ACCGTAGTA-TAAA----TT-----GTGGGCTAGCCG-----ACTCGAGT
GCA_000004655.2_ASM465v1_rm.out5743           TAGCTCC-AC---------ATGGTGGTGGGCCG-GACG----ACTTGGTT
GCA_000004655.2_ASM465v1_rm.out5744           TAGCTCC-AC---------ATGGTGGTGGGCCG-GACG----ACTTGGTT
GCA_000004655.2_ASM465v1_rm.out5748           TAGCTTCACAAGGAC--ACAAGATGGTGGGCTAGACG-----ATCTGGTT
GCA_000004655.2_ASM465v1_rm.out5776           TAGCTTC-AA---------AAGATGATGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out5777           TAGCTTC-AA---------AAGGTGATGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out5856           TAGCTTC-AC---------AAGATGGTGGGTTAGCCA-----ATCTGGAT
GCA_000004655.2_ASM465v1_rm.out5947           TAGCTTC-AC---------AAGGTGGTGGGCTATATG-----ACCGGGGT
GCA_000004655.2_ASM465v1_rm.out6004           -----GTTCCACAA-----GATGGTCGTAGCCAGATG-----ATCTGGTT
GCA_000004655.2_ASM465v1_rm.out6015           TAGCTCC-AC---------AAAGTGGTGGGCTAGACG-----ACCTAGGT
GCA_000004655.2_ASM465v1_rm.out6037           TAGCTAC-AC----------AAGTGGTGGGTTAGACA-----ACCTTGGT
GCA_000004655.2_ASM465v1_rm.out6078           TAGCTTC-AC---------AAGGTGGTGGGCTATACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out6112           TAGCTTC----------ACAAAGTAATGGGCTAGACG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out6152           GCTACTCACAAGATG----------GTGTACTAAATG-----AACTGGGC
GCA_000004655.2_ASM465v1_rm.out6153           -----TGGCTAGCTC--CATAGGTGATGGGCTAGGTG-----ACCTGAAT
GCA_000004655.2_ASM465v1_rm.out6159           TAGCACC-AC---------AAGTTAGTGGGCTAGATG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out6257           TAGCTCC-AT---------AAGGTGGTGGGCTAGACG-----GCCTGGGT
GCA_000004655.2_ASM465v1_rm.out6271           TAGCTTC-AC---------AAGATGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out6286           TAGCTCCATAAGTTG--G--------TGGGTTAGCCG-----GCCTGGGT
GCA_000004655.2_ASM465v1_rm.out6295           -------------T-----GGGTTAGATGATCTGAAT-----TAGAAGCC
GCA_000004655.2_ASM465v1_rm.out6298           TAGTTTCACAAGGTG----------ATGGGTAGTCGA-----TCCGGATT
GCA_000004655.2_ASM465v1_rm.out6299           TAGTTTCACAAGGTG----------ATGGGTAGTCGA-----TCCGGATT
GCA_000004655.2_ASM465v1_rm.out6301           TAGCTTC-AC---------AAGTTAGTGGGCTA-GCCG----GTCTGAAT
GCA_000004655.2_ASM465v1_rm.out6317           TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTAAGT
GCA_000004655.2_ASM465v1_rm.out6342           TAGCACCAC-AAGG----TT-----T-GGGCTAGTTG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out6376           TAACTCC-AC---------AAGGTGATGGGCTAGCCG-----TCCTGTGT
GCA_000004655.2_ASM465v1_rm.out6378           TAACTCC-AT---------AAGATGGTGGACTGGCTG-----TCCTGTAT
GCA_000004655.2_ASM465v1_rm.out6486           TAGCTTC----------ATAAGGTGATGAGCTAGATG-----ATCTGAGT
GCA_000004655.2_ASM465v1_rm.out6490           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6548           TAGCTTC-AC---------AAGGTGATGGGCTAGGTG-----ACCTAGAT
GCA_000004655.2_ASM465v1_rm.out6559           TAGTTTC-AC---------AAGGTGGTGAGCTAGATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out6564           TAGCTTC-AC---------AAGGTGGTGACCTAGATG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out6581           TAGCTCCAT-AAAA----ATG----ATGGGCTAGTTA-----GCCTAAAT
GCA_000004655.2_ASM465v1_rm.out6588           TAGCTTT-AT---------AAGATGGTGGGCTAGATG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out6654           TAGCTAC-AC---------AGGGTGATGGGCTAGACG-----ATTTGGGT
GCA_000004655.2_ASM465v1_rm.out6691           TATCTTT-AC---------GAGATGGTACGTTAGCCG-----TTCTGGGT
GCA_000004655.2_ASM465v1_rm.out6695           -------------------AAGGTGGTGGGTTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out6724           TAGTTTC-AC---------AAGGTGGTGGGCTAGCCG-----ATTTAGGT
GCA_000004655.2_ASM465v1_rm.out6733           TAGCTAC-AC---------GAGGTGGTGGGCTAGACG-----ACTTGGGT
GCA_000004655.2_ASM465v1_rm.out6736           TAGCTCC-AC---------AATGTAGTGGGCTAGATG-----ACTTGGAT
GCA_000004655.2_ASM465v1_rm.out6742           TAGCTCA-AT---------AAGATGGTGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out6752           TAGCTTCAAAATGTG----------GTGAGCTAGGTG-----ATTTATAT
GCA_000004655.2_ASM465v1_rm.out6753           TAGCTTT-AT---------AAAGTGGTGAGCTAGATG-----ATTTGGAC
GCA_000004655.2_ASM465v1_rm.out6840           TAGCTACACA---------AGA-TAGTGAGCTAGATA-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out6889           TTTTCTCCATAATT-----AAGGTGATGGACTAACCG-----GCCTGACT
GCA_000004655.2_ASM465v1_rm.out7009           T--------AGCTCC--GCGAAGTGGTGTGCTAGATG-----ACTTGATT
GCA_000004655.2_ASM465v1_rm.out7109           TAGCTCCAGAAAAT-----GATGGGTTAGATGATCTA-----TGTTCGAA
GCA_000004655.2_ASM465v1_rm.out7150           TAGCTCC-AC---------AAGATGGTGGAGCTAGAGG----ACCTTGGT
GCA_000004655.2_ASM465v1_rm.out7189           TAGCTTC-AC---------AAGGTGGTGAGCTAGACG-----ATCTGAAT
GCA_000004655.2_ASM465v1_rm.out7196           TGCCTAATTAACTCC--ACAAGGTGGTAGGTGAGACG-----ACCTAGAT
GCA_000004655.2_ASM465v1_rm.out7435           ----------GCTC-----CGCAAGATGGTGGGTTAG-----GCCTAACT
GCA_000004655.2_ASM465v1_rm.out7520           TAGCTTC-AC---------AAGATAGTGAGCTAGACA-----ATCTGAAT
GCA_000004655.2_ASM465v1_rm.out7521           TAACTTC-AC---------AAGGTGATGGGCTAGACG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out7540           T--------AGCTTC--ATAACATGGTGGGCTAGCCA-----ACCTAAGT
GCA_000004655.2_ASM465v1_rm.out7575           TAGATTC-AC---------AAGGTGGTAGACTAGCTA-----GCCTCGGT
GCA_000004655.2_ASM465v1_rm.out7585           TAGCTTT-AC---------AAGATGGTGGGTTACACA------TCTGGGT
GCA_000004655.2_ASM465v1_rm.out7586           TAGCTTCACAAAGCA----------GTGGTTAGAGTT------TTTGGTT
GCA_000004655.2_ASM465v1_rm.out7618           TAGCTTC-AC---------AAGGTGGTGGGCTAGACG-----ATCTGGGT
GCA_000004655.2_ASM465v1_rm.out7633           T--------AGCTTC--ACAAGGTGGTTGGCTAGACA-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out7713           TAGCTTC-AT---------GAAGTGGTGGGGTTAGACG----ACCTGTGT
GCA_000004655.2_ASM465v1_rm.out7715           TAGCTTC----------ACAAGGTGGTGTGCTAGATG-----ACCTACGT
GCA_000004655.2_ASM465v1_rm.out7727           TAGCTTC-AC---------AAGGTGGTGGACTAGATG-----ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out7759           ------------------------------------------ACCTGGGT
GCA_000004655.2_ASM465v1_rm.out7770           --------------------------------AAACG-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4     TAGCACC----------ACAAGATAGTGTGCTAGACG-----ATCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out15    TAGCTTC-AC---------AAGGTGATAGGCTAATCG-----GCCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out27    AGCTTCA-----TAA--AATGAATGGTGGGTTATACG-----ATCTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out46    TAGCTCC-AC---------AAGATAGTGGGCTAGACG-----ATATGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out61    TAGCACCAC-AAGG----TA-----GTGGGCTAGCTG-----GTCCGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out89    TAGCTCC-AC---------AAGGTGATGGGCTAGACG-----GCCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out173   CAGAGTCTTCCGGTC--ACAAGGTGGTGGGTTAGACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out257   TAGCTCC-AT---------GATGTGGTGGGCTAAATG-----ATCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out265   TAGCTTTACAAGGTG--GTGGGTTTTCGAGCTAGCCG-----GTCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out327   TAGCTCC----------ACAAGATAATGGGCTAGCCG-----ACTTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out386   TAGCTAC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out469   TAGATTC-AC---------AAGGTGGTGGACTAGCTA-----GCCTCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out537   TAGCTCC-AC---------AAGGTGGTAGGCTAGCTG-----GCCTAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out574   TAGCTTC-AC---------AAGGTGGTGTGCTAGATG-----ACTTGGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out576   TAGTTTC----------ACAAAATGGTGGCCTAGATG-----GCTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out577   TAGCTCTAAGACTA----CGAGATAGTGGATTAGCCG-----ACCTTAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out677   TAGCTTC-AT---------AAGTTGGTGGTCTAGTTG-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out679   TAGCTCC-AC---------AAGGTGATGGGCTAGATG-----ACTTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out695   TAGCTTC-AC---------AAGATGATGGGCTAGACG-----ACCTAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out736   TAGTTCT-AC---------AAGGTGGTGGGCTAGACG-----ACCTGAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out743   TAGCTTC-AC---------ATGGTGGTGGGCTAGACG-----ATCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out749   GCTCCAC-AA---------TCGGTGATGGGTTAGATG-----ATCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out757   T--------AGCTCT--GTAGGGTGGTGGGTTACACA-----AATTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out781   TAGCTTC-AC---------AAGGTGGTGGGCTAGATG-----ATTTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out795   TAGCTCCACA-------------AGGTTGGTTAGACG-----ACCTGGCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out829   TAGTTTCATATGGTG----------GTGGATTAGCCG-----ATCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out855   TAGGTTTATAAGTTA----------GTGGGCTAGCTA-----GTCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out871   TAGCTCC-AC---------AAGGTGGTGGGCTA-GACG----ACCTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out876   TAGCTTC-AC---------AAGGTGGTGGGTTAGTTG-----AGCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out897   CTAGCTC-AC---------AAGGTGGTGGGCTAGTCG-----GCATGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out922   TAGCACCAC-AAGG----TT-----T-GGGCTAGTTG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out957   TAGCTTCACAAAGTG----------GTGGGCTAGCAA-----TCTGAATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1052  TAGCTTC----------ATAAGGTGATGAGCTAGATG-----ATCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1055  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1079  TAGCTTC-AC---------AAGGTGGTGGACTAGATG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1116  TAGCTCCAT-AAAA----ATG----ATGGGCTAGTTA-----GCCTAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1122  TAGCTTT-AT---------AAGATGGTGGGCTAGATG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1149  ------CAAGGTGT-----GATAGGTTAGATGACCTA-----AATTCGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1155  TAGCTTT----------ACAAAATAGTGGGTTAGCTG-----ATCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1177  TAGCTTT-TT---------AGGGCGGTGGGTTAAACG-----ATTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1182  TAGCTCC-AC---------AAGGTGTTGGGTTAGACG-----ATCCAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1223  TAGCTAC-AC---------AGGGTGATGGGCTAGACG-----ATTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1282  TAGCTCC-AC---------AATGTAGTGGGCTAGACG-----ACTTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1285  TAGCTAC-AC---------GAGGTGGTGGGCTAGACG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1298  TAGCTTC-AA---------AATGTGGTGAGCTAGATG-----ATTTATAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1299  TAGCTGC-AT---------AAGGTGGTGAGCTAGATG-----ACTTGGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1400  TAGCTACACA---------AGA-TAGTGAGCTAGATA-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1551  T--------AGCTCC--GCGAAGTGGTGTGCTAGATG-----ACTTGATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1586  TAGCTCC-AT---------AAGGTTGTGGGTTA-GACG----AACTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1607  TAGTTTC-AC---------AAGATGATGGGCTAGACG-----ACTTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1630  TAGCTCCAGAAAAT-----GATGGGTTAGATAATCTA-----TGTTCGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1719  TATCTCT-AC---------AATGTGGTGGGTTA-GTCA----TCCTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1727  GGTCTTCCTAGCTCC--ACAAACTGGTGGGCTATACG-----ACCGGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1728  TGCCTAATTAACTTC--ACAAGATGGTGGGTGAGACG-----ACCTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1749  ---------AAGGT-----GGTTGGCTAGATGACCTG-----GGTTTGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1821  TAACTTC-AT---------AAGGTGATGGGCTATATG-----ATTTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1979  TAGCTCCGCAAGAT-------------GGTGGGTTAG-----GCCTAACT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2042  TAGCTTC-AC---------AAGGTGGTGGGCTATACG-----ATCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2067  TAGCTTT-AC---------AAGATGGTGGGTTA-CAC-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2068  TAGCTTCATAAAATA----------GTGGTTAGAGTT-----TTTGGGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2104  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2117  T--------AGCTCC--ACAAGGTGGTTGGCTAGACA-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2146  TAGCTATAAAAGATG----------GTGGATTAGACG-----ATCTGG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2154  TAGCTCCAC---AAG--C--------TGAGTTAGTCG-----GTCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2156  TAGCTTC-AC---------AAGGTGGTGGGCTAGACT-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2159  TAGCTTC-AC---------AAGGTGGTCGGTTAGCCTGACCGGTCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2168  TAGCTCC-AC---------AAGGTGGTAGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2206  TAGCTTC-AC---------GGGGTGGTGGGCTA-GATG----ACCTGAGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2261  TAGCTTC-AC---------AAGGTGGTGGGCTAGTCT-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2330  -----------------------------------AC-----GACCTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2338  -----------------------------------CG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2359  TAGCTCC-AC---------AAGGTAGCGGGCTAAATG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2366  TAGCTTC-AC---------AAGGTGGTGAGCTAGATG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2399  TAGCTGCGCAAGATG----------ATGGACTAGATA-----ACCTAG-A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2430  TAGCTTC-AT---------AAGGTGGTGGGCTAAATG-----ATCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2472  ------------------------------------------ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2484  TAGCTCC-AC---------GAGGAGGTGGGCTAGACA-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2501  TAGCTTC-AC---------AGGGTGGTGGGCTAGATA-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2507  TATCTTAATAAGGTA----------GAGGCCTAGACG-----ACTTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2552  TAGTTTC-AT---------AAGGTGGTGGGCTAGCCG-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2598  TAGTTTC-AT---------AAGGTGGTAGGCTAGACA-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2603  TATCTCC-AC---------AAGTTGATGGGCTAGGCA-----ATATAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2616  TAGCTTCACAAGGTA--G--------AGGGTTAGACG-----ACATAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2620  TACCTCC-AC---------AAGATGGTGGGCTAGACG-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2732  TAGTTTCACAATGTG----------GTGGGTCAGATG-----ACTTCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2733  TAGCTTTATAGGGCA----------GTGGGTTGGCCC-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2741  TAGTTCC-AC---------AAGGTAGTGGGCTAGTCG-----GCCTTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2769  TAGCTAC-AC---------AAGATGGTAGGCTAGACG-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2788  TAGGTTT-AT---------AAGACGGTGGGCTAGACG-----ATTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2808  TAGCTCT-AC---------AAGGTGGTGGGCTAGACG-----ACATGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2827  TAGCTCC-AC---------AAGGTGGTGGGTTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2847  TAGCTTC-AC---------AAGGTAGTGGGCTAGACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2848  TAGCTAT-AC---------AAGGTGATGATAGACG-------ATCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2892  TAGCTCCACA---------AGA-CATTAGGCTAGATG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2924  TAGCTCCAT----------AAGGTGGTGGGCTAGACG-----AATTAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2950  TAGCTTCAT-AAGA----TGGT-----GGGCTAGCCT-----TACCCCTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2960  TAGCACTG--AAAG----TA-----GTGGTCTAGCTA-----ATCCTGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3015  TAGCTTC-AT---------AAGATGATGGGCTA-GCTA----ACCTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3069  TAGCTCC-AC---------AAGGTGGTGGGCTAAACG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3116  --------------------AGG------TGGTGAGC-----TAACCGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3124  TAGCATCAC-AAGG----TG-----GTGGTCTAGCCG-----GTCAGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3182  -----TC----------ACAAGATGGTGGGCTAGACG-----ACCTGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3185  TAGCTTC-AT---------AAGGTGATGGGCTAGACG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3191  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3200  TAGCCCC-AC---------AAGGTGATGGGCTAGACG-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3216  TAGCTTA-AT---------AAGGTGGTGAGTTA-GACG----ATCTAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3262  CAGCTTA-AC---------AAGGTGGTGGGCTA-GCTG----ACCTTTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3296  -----TGGCTAGCTC--CATAGGTGATGGGCTAGGTG-----ACCTGAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3297  GCTACTC-AC---------AAGGTGGTGTACTAGACG-----AACTGGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3343  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3347  GTTCTGACTAGCTGC--ATAAGGTAGCATGCTAGACG-----ATATGGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3372  --------CCTCAC-----AAGGTGGTGGGCTATACG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3403  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3444  TAGCTCC-AG---------AAGGTGGTGGGTTAGCCG-----GCTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3470  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----AACTGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3471  TAGCTTC-AC---------AAGGTGGTGGGCTAGACG-----AACTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3473  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3479  TAGCTTC-GC---------AAGGTGGTTGGCTAGACA-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3486  TAGCTTT-AC---------AAGATAGAGGGCTAAATG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3489  TAGCTCC----------ACATGATGATGAGCTAGCCG-----ACTTGAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3508  TAGCTTC-AC---------AAGGTGGTGGGCTAGACG-----ACCTATAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3533  TAGCATCAC-AAGT----TG-----T-GGGCTAGCCG-----ACCCGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3544  TAGCTCC-AC---------AAAGTGGTGGGCTAGATG-----ACCTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3556  TAGCTTCAT----------ATGGTGGTGGGCTAG----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3564  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3590  T--------AACTTC--ATAAGGTGATGGGTTAACCG-----ACCCGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3606  TAGCTCC-AT---------AAGATGGTGGGCTAAACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3629  TAGCTTT-AC---------AAAATGGTGGGCTATACG-----ATATGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3673  TAGCTCCATATAAGA---------TGGTGTGTTAGCT-----GGCCTGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3684  CTAGCTC----------CAAATGTGTTGGGTTAGTCG-----GCCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3686  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACT-GGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3766  TAGCTTCAC-AAGA----TACAAGATGGGGTTAGACG-----ATGTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3816  TAGCTTC-AC---------AAGGTCGTAGGCTAGACG-----ATATGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3840  AAACATCAC-AAGA----TGGTA------GGTAGTC------AGCCAAGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3879  TAGCTCC-AC---------AAGGTGGTGGGCTAGATG-----GCCTGCCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3930  TAGCTCC-AC---------AAGGTGGTGGGTTAGATG-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4054  TAGCTTCACAGGACA-----------GGGGTTAGCAT-----GTTTAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4086  TAGCTCC-AC---------AAGGTGGTGGGCTGGGCG-----ATCCGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4091  CAGCTCCACA---------AGA-TGGTGGGCTAGATG-----ATCTGGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4099  TAGCTTC-AC---------AAGGTGGTGTGATAGACG-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4122  TAGCTAC-AT---------AAGGTAGTGGGTTAGATG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4132  TATCTTT-AC---------GAGATGGTACGTTAGCCG-----TTCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4135  -------------------AAGGTGGTGGGTTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4159  TAGCTCCACA---------AGACGGTTGGGCTAGACG-----ACATGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4169  TAGCTCT-AT---------AAGATAGTGGGTTAGACG-----ATTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4252  ----------TCAT-----AAGTTAATGGGCTAAATG-----ATATAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4283  TAGCTCC----------ATAAGGTGTTGGGCTAGACG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4287  TAGCTTC-AC---------AAGATGGTGGGCTAGCCG-----ACTTGGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4297  ------------------------------------C-----GACCTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4338  TAACTTCAC----------AATGTGGCGGGCTAGACG-----ATTTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4341  TAGCTCC-AC---------AAGGTG-GTGGGCACG-------ACTTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4401  TAGCTTC-AC---------AAGGTGGTGGGATACATG-----ATCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4403  TAGCTCT-AT---------AAAATGATAGGCTAGACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4430  TAGCTAC-AC---------AAGGTGGTGGGCTGAACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4446  ------------------TAAGGTGGTTGGTTAGATG-----ACTTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4454  TAGCTTC----------ATGATATGGTGAGCTAGCCG-----GCTTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4484  TAGTTCC-AC---------AAGATGGTGAGCTAGATG-----ACTTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4533  TAGCTCC-AC---------AAGGTGGTTGGCTAAACG-----ACTTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4596  ------------------------------------T-----TCTGGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4639  TAGCTCC-AT---------AAGGTGGTGGGCTAGACG-----ATCTGGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4763  TAGCTCCACAAGGTG----------TTTAGCCGGCCT-----AACAAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4775  TAGCTCC-AC---------AAAGTAGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4801  TAGCTCA-AC---------AAGGTGGTGGGCTAGGCG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4819  TAGCTCCACGCCTCC--ACAGGGTGGTGGGCTAAACG-----ACTTAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4822  TAGTTTT-AT---------AAGGTGTTGGGCTA-GATA----ACCTGAGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4858  TAGTTTC-AC---------AAGGTGGTGGGCTAGCCG-----ATTTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4918  TAGCTTC-AT---------AGGGTGGTGGGCCAGATG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4928  TAGCTCC-AC---------AAGATGGTGAGTTAGCCG-----GCTTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4956  TAGCTCC-AC---------AAGGTGATGGGCTA-GACA----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4980  ----TCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4987  GCTCCAC-GA---------GGTGTGGTGGGCTAGATG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4999  TAGCTCCGCA-------------AGATGGTGGGGACG-----ACCTGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5071  TATCTTC-AC---------AAGGTGGTGGGTTAGACG-----ACTAGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5135  TAGCTTC-AC---------AAGGTGGTATGCTAGTCG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5289  TAGCTCCTC----------AAGGTGGTGGGTTAGATG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5382  TAGCACGAT-AAGG----TG-----T-GGGTTAGTT------GATCAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5430  TAGCTCC----------TTAAGATAGTGGGCTAGATG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5461  TAGCTAC-AC---------AAGGTGGTGGGCTATACG-----ACTTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5507  TAGCTCC-AC---------AAGGTGGTGGGTTAGACG-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5509  TAGCTTC-AC---------AAAGTAGTGGGCTAGATG-----ATTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5520  TAGCTTC-AC---------AAGGTGGTGGGCTAGGCA-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5544  TAGCTCC-AT---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5582  TAACTCC-AT---------AAGATGGTGGACTGGCTG-----TCCTGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5602  TAGCTCC-AC---------AAGGTGGTGGGTTAAACG-----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5640  TAGCTCC-AC---------AAGATAGTGGGCTAAACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5684  CTAGGTA-CA---------AAGATGGTGGGATAGACG-----ATCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5762  TAGCTCC-AC---------AAGGTGGTGGGTTAGACG-----ACTTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5779  TAGCTCCAC----------AAGGTGGTGGGCTAGACG-----ACCCGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5791  TAGCTAC-AT---------GAGGCGGTGGGCTA-ACCA----GCCTGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5872  TAGCTCC-AA---------AAGGTGGTAGGCTGGACG-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5887  T--------AGTTTC--ACAAGATGGTGGATTACGAC-----CTGGATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5898  TAGCTTCACAGGATA----------GTGGGCTAGACG-----ACCTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5920  TAACTTC-AC---------AAGGTGATGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5955  TAGCTTC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5956  TAGCTCC-AC---------AAAGTGGTGGGCTAGCCG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5984  TAGCTTC-AC---------AAGGTTGTGGGTTA-GATG----ACCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6043  TAGCTTC-AT---------AAGATGGTGGGCTAGACG-----ATTTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6090  TAGCACCAT-AAAT----TA-----GTGGGTTGATCA-----GCCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6092  TAGCTCC-AT---------AAGGTGGTGGGCTAGATG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6209  TAGCTTC-AC---------AAGGTGGTGGGCTACACG-----ACCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6238  TAACTC--CA---------CAAGGGGTGGGTTAGATA-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6341  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6413  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6447  AACTTTTATGGTACA----------ATGTACTAGACG-----ATATGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6451  TAGCTTC-AC---------AAGGTAGTGGCCTAGACG-----TCCTGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6454  ----------------------GTGGTGGGCTAGACA-----ACCTAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6518  TAGCACCAT-AAGG----TG-----GTGGGTTTGCCA-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6539  TAGCTCC-AC---------ATGGTGGTGGGCCG-GACG----ACTTGGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6552  TAGCTTCATAAGATG----------GTGGTCTAGACG-----ATATC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6562  TAGCTTC-AA---------AAGATGATGGGCTAGACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6578  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6622  TAGCTTC-AC---------AAGATGGTGGGTTAGCCA-----ATCTGGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6644  TAGTTTC-AC---------AAGGTGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6767  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----ACCTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6827  TAGCTTC-AC---------AAGGTGGTGGGCTATACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6866  TAGCTTC-AC---------AAGGTGGTGGGCTAAACA-----ATATAGAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6906  TAGCACC-AC---------AAGTTAGTGGGCTAGACG-----ATCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7004  TAGCTCC-AC---------AAGGTGGTGGGCTAGACG-----GCCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7018  TAGCTTC-AC---------AAGATGGTGGGCTAGACG-----ACCTGGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7045  -------------T-----GGGTTAGATGATCTGAAT-----TAGAAGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7047  TAGTTTCACAAGGTG----------ATGGGTAGTCGA-----TCCGGATT

GCA_000004655.2_ASM465v1_rm.out4              TCG--AAGCCTCA------------------------TCCCTTCCTC-CC
GCA_000004655.2_ASM465v1_rm.out47             TCG--AAATCTTA------------------------CCCATGCTAA-TT
GCA_000004655.2_ASM465v1_rm.out64             T-C--GAGCCTCACT----------------------C-CT--CTTAATA
GCA_000004655.2_ASM465v1_rm.out94             TTG--AAGCCTCA------------------------CACCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out114            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out117            TTG--AAGCCTTG------------------------CCCCTTCTAA-TA
GCA_000004655.2_ASM465v1_rm.out158            TCG--AAGCCTCACC----------------------C-CCTTCCTTTTT
GCA_000004655.2_ASM465v1_rm.out242            TCG--AAGCTTCA------------------------CCCCTTCTAG-TT
GCA_000004655.2_ASM465v1_rm.out248            TCG--AAGCTTCA------------------------CCCCTTCTAG-TT
GCA_000004655.2_ASM465v1_rm.out269            TCG--AAGTCTCATATCTT--------CTAATTATTTGATATTAGT----
GCA_000004655.2_ASM465v1_rm.out338            TCG--AAGCCTCA------------------------CTTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out343            TCG--AAGCGGCACT------------------------CCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out447            TTG--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out608            TCG--AATCTTCATC------------------------CTTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out619            TCG--AAATCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out631            TTA--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out652            TCG--AAGCCCCA------------------------CACCTTTGAG-TT
GCA_000004655.2_ASM465v1_rm.out684            TCA--AAATCTCA------------------------CATCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out747            TTA--AAGTCTCA------------------------CTCTTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out748            TTA--AAGTCTCA------------------------CCCTTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out750            TCG--AAGGCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out765            TGG--AGCCTCAC------------------------CCTTCTAAT--T-
GCA_000004655.2_ASM465v1_rm.out801            TCG--AAGCCTCA------------------------ATCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out807            TCG--AAGCCTCA------------------------CCTTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out809            TCG--AAGCCTCA------------------------CCTTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out824            TCG--AAGCCTCA------------------------TCTTTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out850            TCG--AAGGCT------------------------CCCCCTTC-TAA-TT
GCA_000004655.2_ASM465v1_rm.out865            TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out899            TCGAAT--ACTCA------------------------CTCTCTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out911            TTAAAACGTTTTA------------------------CCCTTTTTAT-TT
GCA_000004655.2_ASM465v1_rm.out928            TCA--AATTATTT-------------------------------------
GCA_000004655.2_ASM465v1_rm.out942            TTG--AAGCCTCA------------------------CCCCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out968            TTG--AAGCCTCA------------------------CCCTTTTTAT-TT
GCA_000004655.2_ASM465v1_rm.out1000           TTA--AATCCT------------------------CACCTTA--------
GCA_000004655.2_ASM465v1_rm.out1002           TCG--AAGTCTCA------------------------CCCCTTCTAA---
GCA_000004655.2_ASM465v1_rm.out1004           TCG--AAGCATCA------------------------CCCCTTCTAA-TC
GCA_000004655.2_ASM465v1_rm.out1007           TCG--AAGGCT------------------------CACCTCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out1016           TCG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1042           CCT--AATTATTT-------------------------------------
GCA_000004655.2_ASM465v1_rm.out1088           TCA--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1208           TCG--AAGTCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1209           TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1213           TTG--AAGCCTTA------------------------CCCTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1243           TTG--AAACCT------------------------CACAACTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1267           TCG--AAGTCTGA------------------------ACCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1339           TTG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1357           TTA--AAATCTTA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1396           TCA--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1428           TAGAAG--CCTCA------------------------CCATTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out1447           TTG--AAGCCTCA------------------------CTCCTTAATA-TT
GCA_000004655.2_ASM465v1_rm.out1451           TCG--AAGTCTTC------------------------TCACCCCTTC-TA
GCA_000004655.2_ASM465v1_rm.out1548           TCG--AAGCCCCA------------------------CTTCTTATTA-GG
GCA_000004655.2_ASM465v1_rm.out1558           TCG--AAATATCATCCC------------------------TTCTAA-TA
GCA_000004655.2_ASM465v1_rm.out1591           TCG--AAGCTTTA------------------------TCCCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out1607           TCG--AAGCCTCA------------------------CCCATTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out1613           TTA--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1623           TCG--AAGCCTCA------------------------CCCGTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1642           TCG--AAGCCTCT------------------------CCCCTTCTAA-TG
GCA_000004655.2_ASM465v1_rm.out1658           TCG--AAGCCTCA------------------------CCCCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1659           TCG--AAGCCTCA------------------------CCCCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1846           TTA--AAGCCTCA------------------------TCTCTTTTAT-TT
GCA_000004655.2_ASM465v1_rm.out1901           TTA--AAGTCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out1906           ACG--GAGCCTCA------------------------CCCCTTCTTA-TT
GCA_000004655.2_ASM465v1_rm.out1947           TCG--AAACCTCATA------------------------CCTTC------
GCA_000004655.2_ASM465v1_rm.out1950           TCG--AAGCCTCACTCCTT--------ATATTTATTTGATATTATAT-TT
GCA_000004655.2_ASM465v1_rm.out1956           T-C--GAGCCTCATT----------------------C-CT--CTTAATA
GCA_000004655.2_ASM465v1_rm.out1979           TCG--AAGCCTCA------------------------CCCCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out2010           TTG--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2030           TTG--AAGTCTCA------------------------CCCCTTCTAA-CT
GCA_000004655.2_ASM465v1_rm.out2040           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2046           TCA--AAGCCTCA------------------------CCCCTTCTCA-TT
GCA_000004655.2_ASM465v1_rm.out2054           TAG--AAGCATCA------------------------CCCCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out2071           TTG--AAGTCTTACATATT------------------C------TAA-TT
GCA_000004655.2_ASM465v1_rm.out2076           TTG--AAGTCTTACATATT------------------C------TAA-TT
GCA_000004655.2_ASM465v1_rm.out2162           TCG--AAACCTCA------------------------CCCCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out2192           TAG--AAGTCTTA------------------------CCTCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2196           TCG--AAGAATCA------------------------CCCGTTCTAA-AT
GCA_000004655.2_ASM465v1_rm.out2237           TCG---AAACCTCACCCTT------------------------CTAA-TT
GCA_000004655.2_ASM465v1_rm.out2238           TCG---AAACCTCACCCTT------------------------CTAA-TT
GCA_000004655.2_ASM465v1_rm.out2276           TCG--AAGCCTCA------------------------CCCCTTCAAA-TT
GCA_000004655.2_ASM465v1_rm.out2283           TTA--AAGCATCA------------------------CCCCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2329           TTA--AAGCCTCA------------------------CCCCTTATAT-TT
GCA_000004655.2_ASM465v1_rm.out2374           TCG--AAGCCTCA------------------------CCTCTTCTAA-TC
GCA_000004655.2_ASM465v1_rm.out2376           TCG--AAGCCTCA------------------------CCCTTTCTAA-CT
GCA_000004655.2_ASM465v1_rm.out2378           TTA--AAGCCTCA------------------------CACATTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2380           TCG--ATGTCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2392           TCG--AAATCTCA------------------------CTCCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out2395           TCG--AAGTCTCA------------------------CTCGTATAAT-CA
GCA_000004655.2_ASM465v1_rm.out2415           TCG--AAACCTCA------------------------CCCTT----C-TA
GCA_000004655.2_ASM465v1_rm.out2441           T-C--GAGCCTCACC----------------------C-TTCTCTTAATA
GCA_000004655.2_ASM465v1_rm.out2462           TCG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2468           CGAGC----CTTA------------------------CCCCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out2495           TCA--TAGTTTTA------------------------TCTCTTTTAT-TT
GCA_000004655.2_ASM465v1_rm.out2514           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2528           TCA--AAGCCTCACTCCTA------------------TAT----------
GCA_000004655.2_ASM465v1_rm.out2545           TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2586           TTCGAAAGCCTCA------------------------TCCATTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2589           TCG--AAGCTTCA------------------------CCTCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out2591           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2695           TTG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2703           T-C--GAAGCTTTAC----------------------C-TCTTCTAATTA
GCA_000004655.2_ASM465v1_rm.out2724           TTA--AAATCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out2778           TTA--AAGTCTCA------------------------CCTCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out2800           TCG--AAGCCTCTC------------------------CCCTTTTAT-TT
GCA_000004655.2_ASM465v1_rm.out2811           T-C--GAGCCTCACT----------------------C-CT--CTTAAT-
GCA_000004655.2_ASM465v1_rm.out2866           TTG--AAACCTCA------------------------CTCCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out2977           ACG--AAGTCTCA----------------------C--CCCTTCTAG-TT
GCA_000004655.2_ASM465v1_rm.out3072           TCA--AAGCCC-A------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3073           TTA--AAGCCTCA------------------------CTC---CTAT-TT
GCA_000004655.2_ASM465v1_rm.out3106           TCG--AAGCCTCA------------------------CCCTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3111           TCG--AAGCCTAA------------------------CCTTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3121           TCA--AAACCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3279           TCG--GAACCTCA------------------------CCC----------
GCA_000004655.2_ASM465v1_rm.out3323           TCG--AAGTCTCA------------------------CCCCTTCTAA-GT
GCA_000004655.2_ASM465v1_rm.out3327           TTG--AAGCCCCA------------------------CTCATTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3376           TTG--AAGTCTCG------------------------CTTCTTCTAA-TC
GCA_000004655.2_ASM465v1_rm.out3388           TCG--AAGTATCA------------------------TCCTTTTTAA-CT
GCA_000004655.2_ASM465v1_rm.out3390           TTG--AAGCCT------------------------CGTCCCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3444           TCG--AAGCCTCA------------------------CCCCTCCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3446           TCG--AAGCTTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3494           TTG--AGGTTTCA------------------------CCCCTTCAAT-TT
GCA_000004655.2_ASM465v1_rm.out3555           TCG--AAGGCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3579           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3603           TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3653           GTC--TCACC-ATT----------------------------GCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3654           TCG--AAACCTCACCCT------------------------TTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3682           TCG--AAGGCTCATC------------------------ATTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out3683           TCG--AAGGCTCATC------------------------ATTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out3857           TTG--AAGTCTCG------------------------TCCTTTTTATTTT
GCA_000004655.2_ASM465v1_rm.out3866           TCA--AATACTCA------------------------CCCCTTCTAA-CT
GCA_000004655.2_ASM465v1_rm.out3900           T-C--GAGCCTCACT----------------------T-TT--CTTAATA
GCA_000004655.2_ASM465v1_rm.out3901           TCG--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3914           TCG--AAACCTCA------------------------TCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out3917           TTA--AATCCTTACCCCTT------------------C------TAA-TT
GCA_000004655.2_ASM465v1_rm.out3974           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4017           TCG--AAGCTTCA------------------------TCCCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out4076           TCG--AAG------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4091           TCG--AAGCTTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4186           TCG--AAGCCTTA------------------------CCCCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out4187           TCG--AAGCCTTA------------------------CCCCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out4258           TCG--AAGGCTCG------------------------CTCCCTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4377           TCG--AAATCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4390           TTG--AAGCCTCACA------------------------CATTCTAA-T-
GCA_000004655.2_ASM465v1_rm.out4484           CCC--AAGTCTCA------------------------TCCCTACAAT-TT
GCA_000004655.2_ASM465v1_rm.out4489           T-C--AAGCCTCATC----------------------T-C--TCTTAATA
GCA_000004655.2_ASM465v1_rm.out4490           T-C--AAGCCTCATC----------------------T-C--TCTTAATA
GCA_000004655.2_ASM465v1_rm.out4526           TCA--AAACCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4558           TTA--AAATCTTGCT----------------------C-CT--CTAACTA
GCA_000004655.2_ASM465v1_rm.out4570           TTG--AAGCCTCA------------------------TCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4615           CGAAGA---CTTG------------------------CTCCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out4660           TCA--AAGCCTCACC------------------------CTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4662           TCG--AAGTCTCACCCC------------------------TTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4672           TTG--AAACTTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4673           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4689           TTA--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4727           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4779           TTT--AAGCCTCACCAC------------------------TTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4831           TCG--AAGCCT------------------------CACCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4833           ACTTGAAGCCTCA------------------------TCCATTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out4858           TTG--AAGCCTCA------------------------TCCCTTCTAT-TA
GCA_000004655.2_ASM465v1_rm.out4861           TGG--AAGCCTCA------------------------TCCATTTTAA-AT
GCA_000004655.2_ASM465v1_rm.out4885           TCG--AAGCCTTG------------------------TCCATTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out4963           TCA--AATCTCACCACTTCTAATTAACACAAATCTCACCACTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5017           TCG--AAACCTCA------------------------ACCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5023           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5080           TTG--AAGCCT------------------------CACCCATTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5095           -------------------------------------------CTAA-TT
GCA_000004655.2_ASM465v1_rm.out5135           TCG--AAACCTCA------------------------CCCCTTCTGT-TT
GCA_000004655.2_ASM465v1_rm.out5152           TTA--AAGCCTTACCCCCT------------------TCTAA--TTA-GT
GCA_000004655.2_ASM465v1_rm.out5194           TCG--AAGTCT------------------------TACCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5216           TCG--AAGCCCCT------------------------CACCCCTTAT-AA
GCA_000004655.2_ASM465v1_rm.out5219           TCG--AAACCTTA------------------------CCATTTCCTA-AT
GCA_000004655.2_ASM465v1_rm.out5240           TCG--AAGCCTCA----------------------C--CCATTCTAA-TC
GCA_000004655.2_ASM465v1_rm.out5271           TTG--ACGCCTCACT----------------------C-CTAATTATTT-
GCA_000004655.2_ASM465v1_rm.out5272           TCG--AAGCTCAC------------------------C------------
GCA_000004655.2_ASM465v1_rm.out5279           TCG--AAACCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5418           TCG--AAA-------------------------------CTTC-TAA-TT
GCA_000004655.2_ASM465v1_rm.out5435           TCG--AAGCATCAT------------------------CCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5441           TCG--TAGCATCGT------------------------CCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5454           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5656           TCG--AAGTCTCA------------------------CTTCTTTTAA-TT
GCA_000004655.2_ASM465v1_rm.out5661           TCG--AAGCCTCA------------------------CATCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5668           TTG--AAACCTCA------------------------TATCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5721           T-C--AAGCCTCAAC----------------------C-TTCTCTTAATT
GCA_000004655.2_ASM465v1_rm.out5743           TCG--AAGCTCCAGTCCTT------------------C------TAA-TT
GCA_000004655.2_ASM465v1_rm.out5744           TCG--AAGCTCCAGTCCTT------------------C------TAA-TT
GCA_000004655.2_ASM465v1_rm.out5748           CGA--AGTCTCAC------------------------ATCCTTCTAA-T-
GCA_000004655.2_ASM465v1_rm.out5776           TCG--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5777           TCG--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out5856           TCA--AAGTCTCA------------------------CTCCTTCTAG-TT
GCA_000004655.2_ASM465v1_rm.out5947           TCG--AAGCCTCACCCC------------------------TTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6004           TCG--AAAGCTCACC------------------------ACTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6015           TGG--AAGCTTTA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6037           TTA--AAATTT------------------------CATCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6078           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6112           TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6152           TTG--AAGCCTCA------------------------CCCTATCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6153           TCG--AAACTTTA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6159           TCG--AAGCTTCA------------------------CCCTTTTAAT-TA
GCA_000004655.2_ASM465v1_rm.out6257           TCG--AAGTCCCC------------------------T-------TC-TA
GCA_000004655.2_ASM465v1_rm.out6271           TCG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6286           TTA--AAGGCTCA------------------------CCCTTTCTTT-TT
GCA_000004655.2_ASM465v1_rm.out6295           TTA--CCTTTTCTAA------------------------AGTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6298           CAAAT----CTCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6299           CAAAT----CTCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6301           TTG--AAGCCTCA------------------------CTGTTTCTTT-TT
GCA_000004655.2_ASM465v1_rm.out6317           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6342           T-C--GAGCCTCACC----------------------C-CTCTT--AATA
GCA_000004655.2_ASM465v1_rm.out6376           TCG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6378           TCG--AAGTCTCA------------------------CCTCTTCTAG-TT
GCA_000004655.2_ASM465v1_rm.out6486           TCG--AGGTCTCA------------------------CCCTTCTTAA-TT
GCA_000004655.2_ASM465v1_rm.out6490           -----AGCCCACCACCCTT------------------------CTAT-TT
GCA_000004655.2_ASM465v1_rm.out6548           TTG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6559           TCG--AAGCCTCG------------------------CCCCTTCCAG-TT
GCA_000004655.2_ASM465v1_rm.out6564           TCG--AAATCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6581           T-C--GATACCTCAC----------------------C-CTCCCTAATTA
GCA_000004655.2_ASM465v1_rm.out6588           TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6654           TTG--AAGTCT------------------------TACTCTTC-TAA-TT
GCA_000004655.2_ASM465v1_rm.out6691           TTG--AAGCCTCG----------------------T--CCATTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out6695           TTG--AAGCCTCA------------------------CCCATTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out6724           TTA--GAGCAT------------------------CATCCTTC-GAA-TT
GCA_000004655.2_ASM465v1_rm.out6733           TTA--AAGCCTCA------------------------CCACATCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6736           TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6742           TTG--AAATCTCA---------------------------CCCCTTA-TA
GCA_000004655.2_ASM465v1_rm.out6752           TCG--AAGCCTCA------------------------CCCCTTCTTA-TT
GCA_000004655.2_ASM465v1_rm.out6753           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6840           TCG--AAGCATAA------------------------CTTCATCTAA-TT
GCA_000004655.2_ASM465v1_rm.out6889           TTG--AAGCCTCACCCCTT------------------------CTAT-TT
GCA_000004655.2_ASM465v1_rm.out7009           CGA--AGCCTCAC------------------------CTCTTCTAAT-TA
GCA_000004655.2_ASM465v1_rm.out7109           GCC--TCACCCCCT----------------------------TCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7150           TCG--AAGCTT------------------------TACCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7189           TCG--AAGCATCA------------------------CTCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7196           TCG--AAGTCTCA------------------------TCCGTTC-TA-AT
GCA_000004655.2_ASM465v1_rm.out7435           TTG--AAGCCTCAGCCATT------------------------CTAT-TT
GCA_000004655.2_ASM465v1_rm.out7520           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7521           TCG--AAGCCTCA------------------------CCACTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7540           TCG--AAGCACTC------------------------CTAGT------TA
GCA_000004655.2_ASM465v1_rm.out7575           TCG--AAGCATCA----------------------T--CCTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7585           TTG--AAGCCT------------------------CATTTCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7586           TGAAGT---CTTA------------------------TATTTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7618           TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7633           A-------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7713           TCA--AAGCCT------------------------CACCGCTTCTAT-TT
GCA_000004655.2_ASM465v1_rm.out7715           TCG--AAGCCTCA------------------------C-CCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7727           TCA--AAGCCTCA------------------------CTCTTTCTAA-CT
GCA_000004655.2_ASM465v1_rm.out7759           TCG--AAATCTCA------------------------TCCCTTCTAA-TT
GCA_000004655.2_ASM465v1_rm.out7770           TCG--AAGCTTCA------------------------CCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4     TCG--AAGCCTCA------------------------TCCCTTCCTC-CC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out15    TCG--AAGCCTCA------------------------CCCCTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out27    TCG--AAGCCTC------------------------------AC-TT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out46    TCG--AAATCTTA------------------------CCCATGCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out61    T-C--GAGCCTCACT----------------------C-CT--CTTAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out89    TTG--AAGCCTCA------------------------CACCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out173   TCG--AAGCCTCA------------------------CCCCCCTTCC-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out257   TCG--AAGCTTCA------------------------CCCCTTCTAG-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out265   TCG--AAGCCTCG------------------------CTTATTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out327   TCG--AAGCCTCA------------------------CTCGGTCACT-CC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out386   TTG--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out469   TCG--AAGTATCA----------------------T--CCTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out537   TCG--AAATCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out574   TCG--AAGCCCCA------------------------CACC-TCTAG-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out576   TCG--AAGCTCAC------------------------CCATTCTAA--T-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out577   TTG--ACGCCTCACT----------------------C-CTAATTATTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out677   TTA--AAGTCTCA------------------------CCCTTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out679   TCG--AAGGCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out695   TCG--AAGCCTCA------------------------CCCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out736   TCG--AAGCCTCA------------------------ATCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out743   TCG--AAGCCTCA------------------------CCTTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out749   TCA--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out757   TCG--AAGCCTCA------------------------TCTTTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out781   TCG--AAGGCTCC------------------------CCCT-TCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out795   TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out829   TCGAAT--ACTCA------------------------CTCTTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out855   TTAAAACGTTTTA------------------------CCCTTTTTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out871   TCA--AATTATTT-------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out876   TTG--AAGCCTCA------------------------CACCTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out897   TTA--AAGCCTCA------------------------CCCTTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out922   T-C--GAGCCTCACC----------------------C-CTCTT--AATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out957   CGAGC----CTTA------------------------CCCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1052  TCG--AGGCCTCA------------------------TCCTTCTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1055  -----AGCCCACCACCCTT------------------------CTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1079  TCA--AAGCCTCA------------------------CTCTTTCTAA-CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1116  T-C--GATACCTCAC----------------------C-CTCCCTAATTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1122  TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1149  GCC--TCACC-TCT----------------------------TCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1155  TCG--AAGTCTCA------------------------CCTCCTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1177  TCA--AAGCCT------------------------TC---TTT-TAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1182  TCG--AAGGCTCACCCC------------------------TTCTAA-TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1223  TTG--AAGTCT------------------------TATTCTTC-TAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1282  TCG--AAGTCTCA------------------------CCCTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1285  TTA--AAGACTCA------------------------CCACATCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1298  TCG--AAGCCTCA------------------------CCCCTTCTAA-AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1299  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1400  TCG--AAGCATAA------------------------CTTCATCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1551  CGA--AGCCTCAC------------------------CTCTTCTAAT-TA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1586  TCG--AAATCTTACCCCTT------------------CTAATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1607  TCG--AAGCCTCA------------------------CCCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1630  GCC--TCACCCCTT----------------------------TCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1719  TCA--AAGTCTCA------------------------CCCATTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1727  TCG--AAGACTCA------------------------CTCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1728  TCG--AAGCCTCA------------------------TCCGTTC-TA-AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1749  GCC--TGACCCTTTA------------------------ATTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1821  TTG--AAGCCTCA------------------------CCCGTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1979  TTG--AAGCCTCA------------------------GCCATTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2042  TTA--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2067  TTG--AAGCCTCA------------------------CTTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2068  TGAAGT---CTTA------------------------TATTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2104  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2117  A-------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2146  -----TAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2154  TCG--AAGTCTCA------------------------CCCCTTCTAA---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2156  TCG--AAGCATCA------------------------CCCCTTCTAA-TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2159  TCG--AAGGCT------------------------CACCTCTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2168  TCG--AAGCCTCA------------------------CCTATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2206  TCT--AATTATTT-------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2261  TCA--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2330  TCG--AAGTCTCG------------------------TCCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2338  TCG---AAGCCTCATCTTT------------------------CTTA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2359  TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2366  TTG--AAGCCTTA------------------------CCCTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2399  TTCTAAAACCTCA------------------------CTTCTCCTAA-TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2430  TCA--AAGTCTGA------------------------ACCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2472  TCG--AAGTCTCA------------------------TCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2484  TCG--AAGCCTCA------------------------CCCCTTCAAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2501  TTG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2507  GGA-------AAT------------------------TTCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2552  TCA--AAGCTTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2598  TCG--AAGCCC-A------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2603  TCG--AAGCTTCA------------------------CTCCTACTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2616  TTG--AAGCCTCA------------------------CTCCTTAATA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2620  TCG--AAGTCTTC------------------------TCACCCCTTC-TA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2732  TCG--AAGCCCCA------------------------CTTCTTATTA-GG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2733  TAGAAG--CCTCA------------------------CCATTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2741  TCG--AAATATCATCCC------------------------TTCTAA-TA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2769  TCG--AAGCTT------------------------TATCCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2788  TCG--AAGCCTCA------------------------CCCATTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2808  TCG--AAGCCTCA------------------------CCCGTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2827  TCG--AAGCCTCT------------------------CCCCTTCTAA-TG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2847  TCG--AAGCCTCA------------------------CTCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2848  TCG--AAGCCT------------------------CACCCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2892  TCG--AAGCCTTA------------------------TCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2924  TCG--AAACCTCATA------------------------CCTTC------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2950  CTA--ATTGATACTA----------------------G-CT---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2960  T-T--GAGCCTCACT----------------------C-CT--CTTAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3015  TTA--AAGCCTCA------------------------TCTCTTTTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3069  ACG--GAGCCTCA------------------------CCCCTTCTTA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3116  TCG--AAGCCTCACTCCTT--------ATATTTATTTGATATTATAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3124  T-C--GAGCCTCATT----------------------C-CT--CTTAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3182  TTG--AAGTCTCA------------------------CCCCTTCTAA-CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3185  TTA--AAGTCTCA------------------------CCCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3191  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3200  TAG--AAGCATCA------------------------CCCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3216  TTG--AAGTCTTACATATT------------------C------TAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3262  CGA--AGTCTC-------A------------------CTCCTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3296  TCA--AAACTTTA------------------------CCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3297  TTG--AAGCCTCA----------------------C--CCTATCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3343  TAG--AAGTCTTA------------------------CCCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3347  TCG--AAGAATCA------------------------CCCGTTCTAA-AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3372  TCG---AAACCTCACCCTT------------------------CTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3403  TTA--AAGCCTCA------------------------CCCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3444  TCA--AAGCCTCA------------------------CCCCTTATAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3470  TCG--AAGCCTCACCTC------------------------TTCTAA-TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3471  TCG--AAGCCTCA------------------------CCCCTTCTAA-CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3473  TTA--AAGCCTCA------------------------CACATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3479  TCG--ATGTCTCA------------------------CCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3486  TCG--AAACCTCA------------------------CTCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3489  TCG--AAGCCTCA------------------------CTCCTATAAT-CA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3508  TCG--AAACCTCA------------------------CCCTT----C-TA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3533  T-C--GAGCCTCACC----------------------C-TTCTCTTAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3544  TCG--AAGCCTCG------------------------CTTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3556  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3564  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3590  TCA--TAGTTTTA------------------------TCTCTTTTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3606  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3629  TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3673  TTCGAAAGCCTCA------------------------TCCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3684  TCG--AAGCTTCA------------------------CCTCTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3686  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3766  T-C--GAAGCTTTAC----------------------C-TCTTCTAATTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3816  TTG--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3840  T-C--GAGCCTCACT----------------------C-CT--CTTAAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3879  TCA--AAGCCTCA------------------------CCCCTCATAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3930  TCG--AAACCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4054  TTA--AAGCCTCA------------------------CTC---CTAT-AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4086  TCG--AAGCCCCA------------------------CCCTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4091  TCG--AAGCCTAA------------------------CCTTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4099  TCA--AAACCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4122  TCG--AAGCCTTA------------------------TCC---CTTC-AA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4132  TTG--AAGCCTCG----------------------T--CCATTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4135  TTG--AAGCCTCA------------------------CCCATTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4159  TCG--AAGCCTTG------------------------TCCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4169  TCA--AAGTTT------------------------TACCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4252  TCG--AAGTCTCACC------------------------AATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4283  TCG--AAGTCTCA------------------------CCCCTTCTAA-GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4287  TTG--AAGCCCCA------------------------CTCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4297  TCG--AAGTCTCATATCTT--------CTAATTATTTGATATTAGT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4338  TCG--AAGTATCATC------------------------CTTTTTAA-CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4341  TTG--AAGCCT------------------------CGCCCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4401  TTG--AAGTCTCA------------------------CCCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4403  TCG--AAGCTTCA------------------------CCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4430  TCG--AAGCCTCA------------------------CCCATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4446  TCG--AAATCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4454  TTA--AGGTTTCA------------------------CCCCTTCAAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4484  TCG--AAGGCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4533  TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4596  TCG--AAGGCTCATC------------------------ATTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4639  TCG--AAGTCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4763  TTG--AAGTCTCG------------------------TCCTTTTTATTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4775  TCA--AATACTCA------------------------CCCCTTCTAA-CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4801  TCG--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4819  TCG--AAACCTCA------------------------TCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4822  TTA--AATCCTTACCCCTT------------------C------TAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4858  TTA--GAGCAT------------------------CATCCTTC-GAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4918  TCG--GAGCTTCA------------------------CCTCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4928  TCG--AAGCTTCA------------------------TCCCTTCTAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4956  TCG--AAACCTCACTCC---------------------------TAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4980  TCG--AAG------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4987  TCG--AAGCTTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4999  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5071  TCG--AAGCCT------------------------TACC--CC-TAT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5135  TCG--AAGGCTCG------------------------CTCCCTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5289  TTG--AAGCCTCACA------------------------CATTCTAA-T-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5382  T-C--AAGCCTCATC----------------------T-C--TCTTAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5430  TCG--AAGCCTCA------------------------CACCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5461  TCG--AAGCCTCA------------------------TCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5507  TCA--AAGCCTCA------------------------CCCTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5509  TCG--AAGCCTCACCCC------------------------TTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5520  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5544  TTA--AAGCATCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5582  TCG--AAGTCTCA------------------------CCTCTTCTAG-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5602  TTT--AAGCCTTACCAC------------------------TTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5640  TTG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5684  TGG--AAGCCTCA------------------------TCCATTTTAA-AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5762  TCG--AAGCCTCA------------------------ACCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5779  T-------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5791  TCA--AATCTCACCACTTCTAATTAACACAAATCTCACCACTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5872  TTG--AAGCCTCA------------------------CTCCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5887  GA---AGCCTCAC------------------------CC-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5898  -------------------------------------------CTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5920  TCG--AAGCCTCA------------------------CCACTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5955  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5956  TCG--AAACCTCA------------------------CCCCTTCTGT-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5984  TTA--AAGCCTTACCCCCT------------------TCTAA--TTA-GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6043  TCG--AAGCCTCT----------------------CACCCCTTATAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6090  T-T--GGGACTCACT----------------------C-TGTGCTTAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6092  TCG--AAACCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6209  TCG--AAACTTCT------------------------------------A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6238  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6341  ---------CTCA------------------------CCCATTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6413  TTA--AAGCCTCA------------------------CCCCTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6447  TCG--AAGTCTCA------------------------CTTCTTTTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6451  TCG--AAGCCTCA------------------------CATCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6454  TTG--AAACCTCA------------------------TATCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6518  T-C--GAGCCTCACT----------------------T-TT--CTTAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6539  TTG--AAGCTCCAGTCCTT------------------C------TAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6552  ---------------------------------------ACTCCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6562  TCG--AAGCCTCA------------------------CTCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6578  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6622  TCA--AAGTCTCA------------------------CTCCTTCTAG-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6644  TCG--AAGCCTCA------------------------TCCTTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6767  TCG--AAGCTTTA------------------------CTCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6827  TCG--AAGCCTCA------------------------CCCCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6866  TCG--AAACCTCA------------------------CTTATTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6906  TCG--AAGCTTCA------------------------CCCTTTTAAT-TA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7004  TCG--AAGTCCCC------------------------T-------TG-TA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7018  TCG--AAGCCTCA------------------------CCTCTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7045  TTA--CCTTTTCTAA------------------------AGTTCTAA-TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7047  CAAAT----CTCA------------------------CTCCTTCTAA-TT

GCA_000004655.2_ASM465v1_rm.out4              CTAATATTCTCTGGGTTTGAAGCCTTATCCCTTCCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out47             ATTTGA-------------------TATTAGATTTTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out64             ----AT-TTCT------------TATATGAGAGCCCCTCCTCTCATATCC
GCA_000004655.2_ASM465v1_rm.out94             ATTGGA-------------------TATTAGGTCATTCCCTAAT---ATT
GCA_000004655.2_ASM465v1_rm.out114            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out117            ATTTGA-------------------TATTAGGTCATTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out158            -----A-T------------------------------------------
GCA_000004655.2_ASM465v1_rm.out242            ATTTGA-------------------TATTAGGTCTTTCCATAA---TA--
GCA_000004655.2_ASM465v1_rm.out248            ATTTGA-------------------TATTAGGTGTT--TCCCTAAT-ATG
GCA_000004655.2_ASM465v1_rm.out269            -----------------------------AGTCCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out338            ATTTGA-------------------TATTAGATCCTTTCT--TGAT-ATT
GCA_000004655.2_ASM465v1_rm.out343            ATTTGA-------------------TATTAGATCATTTTT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out447            ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out608            ATTTGA-------------------TATTAGTTTCTTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out619            ATTTGA-------------------TATTAGGTTCTTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out631            ATTTTA-------------------TATTAGGTCTTTCCCTAAT---ATT
GCA_000004655.2_ASM465v1_rm.out652            ATTTGA-------------------TATTAGGTCCTTTCCTAA--TGTTC
GCA_000004655.2_ASM465v1_rm.out684            ATTTGA-------------------TATTAGTTCATTCCCTAAT---ATT
GCA_000004655.2_ASM465v1_rm.out747            ATTTGA-------------------TATTAGGTATTTTCCTAATATTTAT
GCA_000004655.2_ASM465v1_rm.out748            ATTTGA-------------------TATTAGGTATTTTCCTAATATTTAT
GCA_000004655.2_ASM465v1_rm.out750            ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out765            -------A------------------------------------------
GCA_000004655.2_ASM465v1_rm.out801            ATTGAA-------------------TATTAGATCATTCCCTAATTAACAT
GCA_000004655.2_ASM465v1_rm.out807            ATTTGA-------------------TATTAGGTCATTC--CTTAGTATTC
GCA_000004655.2_ASM465v1_rm.out809            ATTTGA-------------------TATTAGGTCATTC--CTTAGTATTC
GCA_000004655.2_ASM465v1_rm.out824            ---ATTTGA-----------------TATTGGTCCTACCC--TAAT-ATA
GCA_000004655.2_ASM465v1_rm.out850            ATTTAA-------------------TATTAGGTTTTTCCC--TA------
GCA_000004655.2_ASM465v1_rm.out865            ATTTGA-------------------TATTAGGTATTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out899            ATTTGA-------------------TATTAGATATTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out911            ATTTGA-------------------TATTAGGTTATTTTT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out928            ----GA-------------------TATTAGGTCATTCCC--TAAT-ATC
GCA_000004655.2_ASM465v1_rm.out942            ATTTGA-------------------TATTAGATTATTCTCTAATATTCAC
GCA_000004655.2_ASM465v1_rm.out968            ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1000           -TTTGA-------------------TATTAAGTAATTCCA--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1002           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1004           ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1007           ATTTGA-------------------TATTAGGTCCTTCAT--AAT--ATT
GCA_000004655.2_ASM465v1_rm.out1016           ATTTGA-------------------TATTAGGTCCTTC--CCTAATATTC
GCA_000004655.2_ASM465v1_rm.out1042           ----GA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1088           ATTTGA-------------------TATTAGGTCCTTTCTGAATATTTGC
GCA_000004655.2_ASM465v1_rm.out1208           ATTTCA-------------------TATTAGGTCGTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1209           ATTTCA-------------------TATTAGGTCGTTC--CCTAATATTC
GCA_000004655.2_ASM465v1_rm.out1213           ATTTGA-------------------TATTATGTCCTTCCCTCA--TATTC
GCA_000004655.2_ASM465v1_rm.out1243           ATTTGA-------------------TATTAGGTCA-TCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1267           ATTTGA-------------------TATTAGTTCCTTCTCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out1339           ATTTAA-------------------TATTAGGTCATTTCCTAA--TATTC
GCA_000004655.2_ASM465v1_rm.out1357           A---AT-------------------TGATATTATGTACTTCCCTAATATT
GCA_000004655.2_ASM465v1_rm.out1396           ATTTGA-------------------TGTTAGGCTATTCCTTAA---TATT
GCA_000004655.2_ASM465v1_rm.out1428           ATTTGA-------------------TATTAGACCATTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1447           AGA-----------------------------TCATTCCA--TGAT-ATT
GCA_000004655.2_ASM465v1_rm.out1451           ATTATT-------------------TGATATTAGGTTATACCCTAATATT
GCA_000004655.2_ASM465v1_rm.out1548           ACCTTC-------------------TCTAATATTCGTGTC--TTT-----
GCA_000004655.2_ASM465v1_rm.out1558           ATTATT-------------------GATATTAGGTTTTTT--CCTAATA-
GCA_000004655.2_ASM465v1_rm.out1591           ATTTGA-------------------TATTATATCCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1607           ATTTAA-------------------TATTAGGTTTTTTCCTAATATTCAT
GCA_000004655.2_ASM465v1_rm.out1613           ATTTGA-------------------TATTATGTCAT--TCCCTAAT-ACG
GCA_000004655.2_ASM465v1_rm.out1623           ATCTGA-------------------TATTAGATCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1642           ATTTGA-------------------TATTAGTTCCT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1658           ATTTGA-------------------TATTAGGTCCT--TCCCTAAT-ACT
GCA_000004655.2_ASM465v1_rm.out1659           ATTAGA-------------------TATTAAATCCTCCCC--TAAT-ATC
GCA_000004655.2_ASM465v1_rm.out1846           ATCTGA-------------------TATTAGATTATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1901           ATTTGA-------------------TATTAGATTATTTC-----------
GCA_000004655.2_ASM465v1_rm.out1906           ATTTGA-------------------TATTAGGTAAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1947           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1950           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out1956           ----AA-TTCC------------GATATAAGAGCCCCTCCTCTCATATCC
GCA_000004655.2_ASM465v1_rm.out1979           ATTTGA-------------------TATTAGATTATTTTCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out2010           ATTTGA-------------------TATTAAGTCATTTCCTAATATTTGC
GCA_000004655.2_ASM465v1_rm.out2030           ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2040           ATTTGA-------------------TATTAGGTCCT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2046           ATTTGA-------------------TATTAGGTTCTACTCCCT-------
GCA_000004655.2_ASM465v1_rm.out2054           CTTTGC-------------------TATTAAATCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2071           ATTTGA-------------------TATTAAGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2076           ATTTGA-------------------TATTAAGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2162           ATTTGA-------------------TATTAGATCCTTC--CATAACATTC
GCA_000004655.2_ASM465v1_rm.out2192           ATTTGA-------------------TATTAGATCCTTCCC--TAAT-GTT
GCA_000004655.2_ASM465v1_rm.out2196           TCTAATTATTTGAT------------ATTAGTTATTTTCC--TTAA-CAT
GCA_000004655.2_ASM465v1_rm.out2237           ATTTGA-------------------TATTAGGTTCTCCCT--TATA-TTC
GCA_000004655.2_ASM465v1_rm.out2238           ATTTGA-------------------TATTAGGTTCTCCCT--TATA-TTC
GCA_000004655.2_ASM465v1_rm.out2276           ATTTGA-------------------TATATTAGGTCATTCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2283           ATTTGA-------------------TATTAGGTCCT--TTCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2329           ATTTGA-------------------TATAAAGTCATTCCCCAATATTCAC
GCA_000004655.2_ASM465v1_rm.out2374           AATTGT-------------------TATTAATGG-TCATTCCCTAATATT
GCA_000004655.2_ASM465v1_rm.out2376           ATTTGA-------------------TATTATGTCCTTTCC--AAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2378           ATTTGT-------------------TATTTGGTCATTCCCTAAT---ATT
GCA_000004655.2_ASM465v1_rm.out2380           ATTTAA-------------------TATTAGGTCATGCCCTAATATTCAC
GCA_000004655.2_ASM465v1_rm.out2392           ATTTGA-------------------TATTAGGTCATTTCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2395           TTTGATATTAG--------------------CTCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2415           ATTATT-------------------TGATATTAGATCATTCCCTAATATT
GCA_000004655.2_ASM465v1_rm.out2441           ----AA-TTTT------------GATATGAGAACATTTCCTCTCATATCC
GCA_000004655.2_ASM465v1_rm.out2462           ATTTGA-------------------TATT---------------------
GCA_000004655.2_ASM465v1_rm.out2468           ATTTAA-------------------TATTAGATTGTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2495           ---ACTAGA-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out2514           ATTTGA-------------------TATTAGATCTT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2528           --TTGA-------------------TATTAGGTACTTCCC--TAAT-ATC
GCA_000004655.2_ASM465v1_rm.out2545           ATTTGA-------------------TATTAGGTTATTACCTAATATTCTC
GCA_000004655.2_ASM465v1_rm.out2586           ATTTGA-------------------TATTAGGTCGTTCCA--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2589           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2591           ATTTGA-------------------TATTAGATCATTCCCTAA--TAATT
GCA_000004655.2_ASM465v1_rm.out2695           ATTTGA-------------------TATTAGGTTATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2703           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2724           ATTTAA-------------------TATTAGGACATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2778           ATTTAA-------------------TATTAGGTCATTCCCTAATACT---
GCA_000004655.2_ASM465v1_rm.out2800           ATTTAA-------------------TATTAGGTCCTTCCC--TTAT-A--
GCA_000004655.2_ASM465v1_rm.out2811           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2866           ATTTCG-------------------TATTAGGCCCTTCAC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out2977           ATTTAA-------------------TATTAGGTTATTCCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3072           ACTTGA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3073           ATTTAA-------------------TATTAGGTCATTTCA--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3106           ATTTGA-------------------TATTATGTCATTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out3111           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3121           ATTTGA-------------------TATTAGATTTTTCCTTAATATTCGC
GCA_000004655.2_ASM465v1_rm.out3279           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3323           ATTTTA-------------------AT-ATTAGGTCATTCCCTACT-ATT
GCA_000004655.2_ASM465v1_rm.out3327           ATTTAA-------------------TATTAGGTCTTTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out3376           ATCTGA-------------------TATTAGGTTCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3388           ATTTCAT-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3390           ATTTGA-------------------TATTAGGTCTTTCTC--TAAT-ATC
GCA_000004655.2_ASM465v1_rm.out3444           ATTTGA-------------------TATTATGTCATTTTCTAA--TATTC
GCA_000004655.2_ASM465v1_rm.out3446           ATTTGA-------------------CATTAGATCATTCCC--TGCT-ATT
GCA_000004655.2_ASM465v1_rm.out3494           ATTT-GTTATCA-------------------GGTCTCCCC--TAGT-GTT
GCA_000004655.2_ASM465v1_rm.out3555           AATTAA-------------------TATTATGTCATTTTCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out3579           AATATT-------------------TAATATTAGGTCCTACCCTAATATT
GCA_000004655.2_ASM465v1_rm.out3603           ATTTGA-------------------TATTTGGTCATTCCCTAATATTCGC
GCA_000004655.2_ASM465v1_rm.out3653           ATTTGA-------------------CA-----------------------
GCA_000004655.2_ASM465v1_rm.out3654           ATTTAA-------------------TATTAGATAATTCAC--GTTTTTTA
GCA_000004655.2_ASM465v1_rm.out3682           ATTTGA-------------------TATTAGGTTATTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3683           ATTTGA-------------------TATTAGGTTATTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3857           TT-TTA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3866           ATTTGA-------------------TATTATGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3900           ----AA-TTCC------------GATATGAGGGCTCCTCCTCTCGTATCC
GCA_000004655.2_ASM465v1_rm.out3901           ATTCGA-------------------TATTATGTTAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3914           ATTTGATATTAGATCATACCAACGTCTTTTTT------------------
GCA_000004655.2_ASM465v1_rm.out3917           ATTTAA-------------------TATTTTGTCATTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out3974           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4017           ATTTGA-------------------TATTAGGTCCTTTACTAATATTAAC
GCA_000004655.2_ASM465v1_rm.out4076           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4091           ATTTGA-------------------TATTATGTCATTCTCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out4186           ATTTGA-------------------TATTAGGTCCTTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out4187           ATTTGA-------------------TATTAGGTCCTTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out4258           ATTTGA-------------------TATTAGGTCATTCCCTAA--TATTC
GCA_000004655.2_ASM465v1_rm.out4377           ATTTGA-------------------TATCAGATCTTTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4390           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4484           ATTTAA-------------------TATTAGATCATTTCC--TAAC-ATT
GCA_000004655.2_ASM465v1_rm.out4489           ----AA-TTTT------------GATATAAAAGTTATTTCTCTCATATCT
GCA_000004655.2_ASM465v1_rm.out4490           ----AA-TTTT------------GATATAAAAGTTATTTCTCTCATATCT
GCA_000004655.2_ASM465v1_rm.out4526           ATTTGA-------------------TTTTAGATCATTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out4558           ----TT-T--------------------CATATTATGTTTTTTTTTAACC
GCA_000004655.2_ASM465v1_rm.out4570           ATTTGA-------------------TATTAGGTATTTCGTTAATATTCGC
GCA_000004655.2_ASM465v1_rm.out4615           ATTTGA-------------------TATTAGGTCATTTCT--TAAT-GTT
GCA_000004655.2_ASM465v1_rm.out4660           ACT-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4662           ATATTT-------------------GATATTAGGTCTTT-----------
GCA_000004655.2_ASM465v1_rm.out4672           ATTTGA-------------------TATTATGTTATTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4673           ATTTGA-------------------TATTAGTTCTTTCTCTAATATTCAC
GCA_000004655.2_ASM465v1_rm.out4689           ATTTGA-------------------TATTAGGTCCTTTCTAAT---ATTC
GCA_000004655.2_ASM465v1_rm.out4727           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4779           ATTTGA-------------------TATTAGCTAGGTCAT--TCCCTAAT
GCA_000004655.2_ASM465v1_rm.out4831           ATCTGA-------------------TATTAGGTCATTTCT--TAGC-ATT
GCA_000004655.2_ASM465v1_rm.out4833           ATTTGA-------------------TATTAGATCATTATC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4858           ATTTGA-------------------TATTAGATTCTTCCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4861           ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4885           ATTTGA-------------------TATTAGGTCGTTCCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out4963           ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5017           ATTTGA-------------------TATTAGGTTAT--TCTCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5023           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5080           ATTTGA-------------------TATTAGGTTCTTCCT--TAGT-ATT
GCA_000004655.2_ASM465v1_rm.out5095           ATTTAA-------------------TATTAAATCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5135           ATTTGA-------------------TATTAGATCAT--TTTCTAAT-CTT
GCA_000004655.2_ASM465v1_rm.out5152           ATTTGA-------------------TATTAAGTCATTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5194           AGTTGA-------------------TATTAGGTTCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5216           ---TTTGAT-----------------ATTAGATACTTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5219           ATTTG---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5240           ATTTGA-------------------TATTAGGTCTTTTCT--AATA-CTT
GCA_000004655.2_ASM465v1_rm.out5271           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5272           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5279           ATTTGA-------------------TATTATGTCCT--TTCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5418           ATTTGA-------------------TACTAGGTCATTCCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5435           ATTTAA-------------------TATTAGAACCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5441           ATTTAA-------------------TATTAGAACCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5454           ATTTGA-------------------TATTAGGTCAT--TCCTTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5656           ATCTGA-------------------TATTATGTACTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5661           ATTTGA-------------------TATTAGATCATTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out5668           ATTTGA-------------------TATTAG-------------------
GCA_000004655.2_ASM465v1_rm.out5721           AATAAA-TTTT------------AATATCAGAGTTTTTTCTCTTATA---
GCA_000004655.2_ASM465v1_rm.out5743           ATTTGA-------------------TATTCGGTCATTTCT--CTAATATT
GCA_000004655.2_ASM465v1_rm.out5744           ATTTGA-------------------TATTCGGTCATTTCT--CTTATATT
GCA_000004655.2_ASM465v1_rm.out5748           -------TATTTAA-----------TATTAGCTTATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5776           ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5777           ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5856           ATTTAA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out5947           TCTAAT-------------------TATTTGATATTAAGT--CATTCTCT
GCA_000004655.2_ASM465v1_rm.out6004           ATTTAA-------------------TATTAGATCTTTCGT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6015           ATTTAA-------------------TGTTAGGTCATTTCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6037           ATTTGA-------------------TATTAGATTATTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6078           ATTTAA-------------------TATATTATGTCATTCTCTAATATTC
GCA_000004655.2_ASM465v1_rm.out6112           GTTTGA-------------------TATTAGATCCTTCCA--TAAT-TTT
GCA_000004655.2_ASM465v1_rm.out6152           ATTTGA-------------------TATTAGGTTCTTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6153           ATTTGATAATAATTAGACCATTCCTTA-----------------------
GCA_000004655.2_ASM465v1_rm.out6159           T----T-------------------TGATATTAGGTCCTTCCCTAATACT
GCA_000004655.2_ASM465v1_rm.out6257           ATTATT-------------------TAATATTAGATCATTCCCTAATATT
GCA_000004655.2_ASM465v1_rm.out6271           ATTTGA-------------------CATTATGTCCT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6286           T-TATA-------------------TATTAGATACTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6295           ATTTGA-------------------TATTAGACTATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6298           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ACA
GCA_000004655.2_ASM465v1_rm.out6299           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ACA
GCA_000004655.2_ASM465v1_rm.out6301           ATTTGA-------------------TATTAGATTCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6317           ATTTGA-------------------TATTAGATCCT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6342           ----AA-TTTC------------AATATGAGAGCCCATCCTCTCATATCC
GCA_000004655.2_ASM465v1_rm.out6376           ATTTGA-------------------TATTAGGTCTTCCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out6378           ATTTGA-------------------TATTAGGTCCTCCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6486           ATTTG---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6490           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6548           ATTTGA-------------------TATCAGGTCTTTCCCTAATATTCGC
GCA_000004655.2_ASM465v1_rm.out6559           ATTTGA-------------------TATTAGGTCATTCCCTAA--TATTC
GCA_000004655.2_ASM465v1_rm.out6564           ATTTAA-------------------TATTAGGTTCTTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out6581           ----TT--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6588           ATTTGA-------------------TATTAGGTCCTAATA--TTCG-CGT
GCA_000004655.2_ASM465v1_rm.out6654           ATTTGA-------------------TATTAGGTCATTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6691           ATTTGA-------------------TATTAGGTCGTTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6695           ATTTGA-------------------TATTATGTCCTTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6724           ATTTGA-------------------TATTAGATCATTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6733           ATTTGA-------------------TATTAGGTCTT--TTCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6736           ATTTCA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6742           ATTTTT-------------------TAATATTAGATCCTTCCCTGATATT
GCA_000004655.2_ASM465v1_rm.out6752           ---TGA-------------------TATCAGGTCATTCTT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out6753           ATTTGA-------------------TATTAGATTATTCTCTAA--TATTC
GCA_000004655.2_ASM465v1_rm.out6840           ATTTGA-------------------TATTAGGTCATTCCT--TGAT-ATT
GCA_000004655.2_ASM465v1_rm.out6889           ATTTGA-------------------TATTAGGTCATTCAC--TATT-ATT
GCA_000004655.2_ASM465v1_rm.out7009           TTTGATAGT-----------------ATTAAGTCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7109           ATTTGA-------------------TATTAGATGCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7150           ATTTGA-------------------TATTATGTCCTTCCA--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7189           ATTTGA-------------------GATTAGATTCTTCCCTAA---TATT
GCA_000004655.2_ASM465v1_rm.out7196           TATAATTATTTAAT------------ATTAGGTCATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7435           ATTTGA-------------------TATTATGTCCTTTGC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7520           ATTTGA-------------------TATTAGGTCATTTTCTAATATTTGC
GCA_000004655.2_ASM465v1_rm.out7521           ATTTAA-------------------TATTAGGTCCTTCCCTAA--TATTT
GCA_000004655.2_ASM465v1_rm.out7540           ---TTCGAT-----------------ATTAGGTTATTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7575           TTTTGA-------------------TATTAGGTCGTTCTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7585           GTTTGA-------------------TATTAGGTTATTTCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7586           ATTTGA-------------------TATTAGATCATTTCT--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7618           ATTTGA-------------------TATTAGGTCAT--TCTCTAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7633           ---TTTGAT-----------------ATTAAGTTCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7713           ATTTGA-------------------TATTAGGTTCTTCCA--TGAT-ATT
GCA_000004655.2_ASM465v1_rm.out7715           ATTTGA-------------------TATTAGGTTCTTCCC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7727           ATTTGA-------------------TATTACGTCATTCCCTAA--TATTC
GCA_000004655.2_ASM465v1_rm.out7759           ATTTGA-------------------TATTAGTTCCTTTTC--TAAT-ATT
GCA_000004655.2_ASM465v1_rm.out7770           ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4     CTAATATTCTCTGGGTTTGAAGCCTTATCCCTTCCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out15    ATTTGA-------------------TATTAGGTCATTCCA--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out27    TATAATTATTTAAT------------ACTAGATCATCCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out46    ATTTGA-------------------TATTAGATTTTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out61    ----AT-TTCT------------TATATGAGAGCCCCTCCTCTCATATCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out89    ATTGGA-------------------TATTAGGTCATTTCCTAAT---ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out173   TTTAT---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out257   ATTTGA-------------------TATTAGGTCTTTCCATAA---TA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out265   ATTTGA-------------------TATTAGGTTATTTCT--TAAT-AAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out327   TAATTATTTAA--------------------TATTAG-------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out386   ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out469   TTTTGA-------------------TATTAGGTCGTTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out537   ATTTGA-------------------TATTAGGTTCTTTTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out574   ATTTGA-------------------TATTAGATCCTTTCC--TAAT-GTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out576   -------TATTTGA-----------TA-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out577   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out677   ATTTGA-------------------TATTAGGTATTTTCCTTATATTTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out679   ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out695   ATTTGA-------------------TATTAGATCTTCCCTAATATTTATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out736   ATTGAA-------------------TATTAGATCATTCCCTAATTAACAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out743   ATTTGA-------------------TATTAGGTCATTC--CTTAGTATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out749   ATTTGA-------------------TATTAGGTTATTTTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out757   ---ATTTGA-----------------TATTGGTCCTACCC--TAAT-ATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out781   ATTTAA-------------------TATTAGGTTTTTCCC--TA------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out795   ATTTAA-------------------TATTAGGTATTTCCC--TAGT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out829   ATTTGA-------------------TATTAGATATTTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out855   ATTTGA-------------------TATTAGGTTATTTTT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out871   ----GA-------------------TATTAGGCCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out876   ATTTGA-------------------TATTAGATTATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out897   ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out922   ----AA-TTTC------------AATATGAGAGCCCATCCTCTCATA---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out957   ATTTAA-------------------TATTAGATCGTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1052  ATTTG---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1055  ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1079  ATTTGA-------------------TATTACGTCATTCCCTAA--TATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1116  ----TT--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1122  ATTTGA-------------------TATTAGGTCCTAATA--TTCG-CGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1149  ATTTGA-------------------TATTAGATCCTTTCT--TGAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1155  ATTTGTTATTATAG-----------------GTCATACCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1177  ATTTGA-------------------TATTAGTTCCTTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1182  ATTTGA-------------------TATTATTTGATATTA--GATTCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1223  ATTTGA-------------------TATTAGGTCATTTTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1282  ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1285  ATTTGA-------------------TATTAGGTTTTTTCCTAA--TATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1298  ATTTGA-------------------TATCAGGTCATTCTT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1299  ATTTGA-------------------TATTAGATTATTCTCTAA--TATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1400  ATTTGA-------------------TATTAGGTCATTCCT--TGAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1551  TTTGATAGT-----------------ATTAGGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1586  AATTGA-------------------TATTATGTACTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1607  ATTTGA-------------------TATTAGATCATTTTCTAA--TATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1630  ATTTGA-------------------TATTAGGTGCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1719  ATTTGA-------------------TATTAGGTCATTTCT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1727  TCTAATTATTTGAT------------ATTAAGTCATTCTC--TAAT-GGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1728  TATAATTATTTAAT------------ATTAGGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1749  ATTAGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1821  ATTTGA-------------------TATTAGTTTTTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1979  ATTTGA-------------------TATTATGTCCAATGC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2042  ATTTGA-------------------TATTAGGTCAT--TCCCTAAT-ACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2067  GTTTGA-------------------TATTAGGTTATTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2068  ATTTGA-------------------TATTAGATCATTTCT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2104  ATTTGA-------------------TATTAGGTCAT--TCTCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2117  ---TTTGAT-----------------ATTAAGTTCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2146  ATTTGA-------------------TATTAAGTACTTTCT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2154  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2156  ATTTGA-------------------TATTAGGTCAT--TCTCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2159  ATTTGA-------------------TATTAGGTCCTTCAT--AAT--ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2168  ATTTGA-------------------TATTAGGTCTT--TCTCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2206  ----GA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2261  ATTTGA-------------------TATTAGGTC--CTTTCCGAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2330  ATTTGA-------------------TAT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2338  ATATGA-------------------TATTAGGTTCTCCAT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2359  ATTTCA-------------------TATTAGGTCGTTC--CCTAATATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2366  ATTTGA-------------------TATTATGTCCTTTCCTCA--TATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2399  ATTTGA-------------------TATTAGATCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2430  ATTTGA-------------------TATTAGTTCCTTCTCTAA--TATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2472  ATTTGA-------------------TATTAGTTCCTTTTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2484  ATTTGA-------------------TATT--AGGTCATTCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2501  ATTTAA-------------------TATTAGGTCAT--TTCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2507  ATTTGA-------------------TAATGAATCATTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2552  ATTTGA-------------------TGTTAGGCTAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2598  ACTTGA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2603  ATTTAA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2616  AGA-----------------------------TCATTCCA--TGAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2620  ATTATT-------------------TGATATTAGGTTATACCTTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2732  ACCTTC-------------------TCTAATATTCGTGTT--TTT-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2733  ATTTGA-------------------TATTAGACCATTTTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2741  ATTATT-------------------GATATTAGGTTTTTT--CCTAATA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2769  ATTTGA-------------------TATTATATCCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2788  ATTTAA-------------------TATTAGGTTTTTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2808  ATCTGA-------------------TATTAGATCAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2827  ATTTGA-------------------TATTAGTTCCT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2847  ATTTGA-------------------TATTAGGTCCT--TCCCTAAT-ACT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2848  ATTAGA-------------------TATTAAATCCTCCCC--TAAT-ATC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2892  ATTTGA-------------------TATTAGATCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2924  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2950  --------------------------CTAATATTTATGTTTTTATTAATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2960  ----AT-TTCC------------AATATGAGAGCTCCTCCTCTCATA---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3015  ATCTGA-------------------TATTAGATTATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3069  ATTTGA-------------------TATTAGGTAAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3116  ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3124  ----AA-TTCC------------GATATAAGAGCCCCTCCTCTCATATCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3182  ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3185  ATTTAA-------------------TATTAGGTAATTCCCTAATACT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3191  ATTTGA-------------------TATTAGGTCCT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3200  CTTTGC-------------------TATTAAATCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3216  ATTTGA-------------------TATTAAGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3262  ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3296  ATTTGATAATAATTAGACCATTCCTTA-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3297  ATTTGA-------------------TATTAGGTTCTTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3343  ATTTGA-------------------TATTAGATCCTTCCC--TAAT-GTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3347  TCTAATTATTTGAT------------ATTAGGTATTTTCC--TTAA-CAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3372  ATTTGA-------------------TATTAGGTTCTCCCT--TATA-TTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3403  ATTTGA-------------------TATTAGGTCCT--TTCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3444  ATTTGA-------------------TATAAAGTCATTCCCCAATATTCAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3470  AATTGA-------------------TATTAATGGTCATTC--TCTAATAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3471  ATTTGA-------------------TATTATGTCCTTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3473  ATTTGT-------------------TATTAGGTCAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3479  ATTTAA-------------------TATTAGGTCATGCCCTAATATTCAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3486  ATTTGA-------------------TATTAGGTCATTTCT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3489  TTTGATATTAG--------------------CTAATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3508  ATTATT-------------------TGATATTAGATCATTCCCTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3533  ----AA-TTTT------------GATATGAGAACATTTCCTCTCATATCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3544  ATTTGA-------------------TATTAGGTCAT--TCTCTAAT-A--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3556  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3564  ATTTGA-------------------TATT---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3590  ---ACTAGA-----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3606  ATTTGA-------------------TATTAGATCTT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3629  ATTTGA-------------------TATTAGGTTAT--TACCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3673  ATTTGA-------------------TATTAGGTCGTTCCA--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3684  ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3686  ATTTGA-------------------TATTAGATCATTCCCTAA--TAATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3766  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3816  ATTTGA-------------------TATTAGGTCAT--TTACTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3840  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3879  ATTTGA-------------------TATTAGATCATTCTCTAAT---ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3930  ATTTAA-------------------TATTAGATTCT--TCTCTAGT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4054  ATTTAA-------------------TATTAGGTCATTTCA--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4086  ATTTGA-------------------TATTATGCCAT---TCCCTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4091  ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4099  ATTTGA-------------------TATTAGATTTTTCCTTAATATTCGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4122  ATTGTT-------------------TGATATTAGGTCATTATCTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4132  ATTTGA-------------------TATTAGGTCGTTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4135  ATTTGA-------------------TATTATGTCCTTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4159  ATTTGA-------------------TATTAGGTCATTCCT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4169  ATTTAA-------------------TATTAGTTCCATACG--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4252  ATTTGA-------------------TATTAGATCATTCTA--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4283  ATTTTAATA-TTAG-----------------GTCATTCCC--TACT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4287  ATTTAA-------------------TATTAGGTCTTTCCCTAATATCCCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4297  -----------------------------AGTCCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4338  ATTTCAT-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4341  ATTTGA-------------------TATTAGGTCTTTCTC--TAAT-ATC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4401  ATTTGA-------------------TATTATGTCATTTTCTAA--TATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4403  ATTTGA-------------------CATTAGATCATTCCC--TGCT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4430  ATTTGA-------------------TAGTAGGTCCT--TCTCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4446  ATTTGA-------------------TATCAGATCTTTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4454  ATTT-GTTATCA-------------------GGTCTCCCC--TAGT-GTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4484  AATTAA-------------------TATTATGTCATTTTCTAA--TATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4533  ATTTGA-------------------TATTTGGTCATTCCCTAATATTCG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4596  ATTTGA-------------------TATTAGGTTATTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4639  AATATT-------------------TAATATTAGGTCCTACCCTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4763  TTTTTA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4775  ATTTGA-------------------TATTATGTCAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4801  ATTCGA-------------------TATTATGTTAT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4819  ATTTGATATTAGATCATACCGACGTCTTTTTT------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4822  ATTTGA-------------------TATTTTGTCATTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4858  ATTTGA-------------------TATTAGATCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4918  ATTTGA-------------------TATTAGGTCATTTCCTAAT---ATC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4928  ATTTGA-------------------TATTAGGTCCTTTAC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4956  ATTTGA-------------------TATTAGGTCCATCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4980  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4987  ATTTAA-------------------TATTATGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4999  ATTTGA-------------------TATTAGGTCATTTCT--TAGC-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5071  ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5135  ATTTGA-------------------TATTAGGTCATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5289  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5382  ----AA-TTTT------------GATATAAAAGTTATTTCTCTCATATCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5430  ATTTGA-------------------TATTAGATCCTTCCA--TATT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5461  ATTTGA-------------------TATTAGGTATTTCGTTAATATTCGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5507  ATT-----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5509  ATATTT-------------------GATATTAGGTCTTT-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5520  ATTTGA-------------------TATTAGTTCTTTCTCTAATATTCAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5544  ATTTGA-------------------TATTAGGTCCTTTCTAAT---ATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5582  ATTTGA-------------------TATTAGGTCCTCCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5602  ATTTGA-------------------TATTAGCTAGGTCAT--TCCCTAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5640  ATTTGA-------------------TATTAGGTCATTC--CCTAATATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5684  ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5762  ATTTGA-------------------TATTAGGTTAT--TCTCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5779  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5791  ATTTGA-------------------TATTAGGTCCTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5872  ATTTAA-------------------TATTATGTCCTTCAC--TATA-TTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5887  ---ATTCAT-----------------ATTAGGTTCTTCCT--TAGT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5898  ATTTAA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5920  ATTTAA-------------------TATTAGGTCCTTCCCTAA--TATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5955  ATTTAC-------------------CCCTTCTAATTTTTTTATATTAGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5956  ATTTGA-------------------TATTAGATCAT--TTTCTAAT-CTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5984  ATTTGA-------------------TATTAAGTCATTTCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6043  ATTTGA-------------------TATTAGATACTTTTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6090  ---CCA-TT--------------GATATAAAGTCCTTCCTT---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6092  ATTTGA-------------------TATTAGGTCCT--TTCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6209  ATTATT-------------------TGATACTAGGTCATTCCTTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6238  ATTTGA-------------------TATTAGGTCATTCCT--TAAT-ATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6341  ATTTGA-------------------TATTAGGTCCTTATC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6413  ATTTGA-------------------TATTAGGTACT--TCCCTAAT-ACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6447  ATCTGA-------------------TATTATGTACTTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6451  ATTTGA-------------------TATTAGATCATTCCCTAA--TATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6454  ATTTGA-------------------TATTAG-------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6518  ----AA-TTCC------------GATATGAGGGCTCCTCCTCTCGTATCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6539  ATTTGA-------------------TATTCGGTCATTTCT--CTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6552  ATTTGA-------------------TATTAGGTCCTTTCC--TAAC-GTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6562  ATTTGA-------------------TATTAGGTCATTC--CCTAATATTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6578  ------------------TATTTGATATTAGGTCCTTCCC--TAGT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6622  ATTTAA-------------------TATTAGGTCATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6644  ATTTGA-------------------TATTTGGTCCT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6767  ATTTAA-------------------TGTTAGGTCATTTCT--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6827  ATTTAA-------------------TATATTATGTCATTCTCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6866  ATTTTA-------------------TATTAGGTTATTCCC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6906  T----T-------------------TGATATTAAGTCCTTCCCTAATACT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7004  ATTATT-------------------TAATATTAGATCATTCTCTAATATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7018  ATTTGA-------------------CATTATGTCCT--TCCCTAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7045  ATTTGA-------------------TATTAGACTATTCTC--TAAT-ATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7047  ATTTGA-------------------TATTAGTTCATTCCC--TGAT-ACA

GCA_000004655.2_ASM465v1_rm.out4              TGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out47             TGAGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out64             AATGGGTTTTTT-------------------
GCA_000004655.2_ASM465v1_rm.out94             CGTGCT-------------------------
GCA_000004655.2_ASM465v1_rm.out114            -------------------------------
GCA_000004655.2_ASM465v1_rm.out117            GTGTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out158            -------------------------------
GCA_000004655.2_ASM465v1_rm.out242            -------------------------------
GCA_000004655.2_ASM465v1_rm.out248            CGTGT--------------------------
GCA_000004655.2_ASM465v1_rm.out269            CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out338            CGCATTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out343            TGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out447            CGCGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out608            CATGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out619            CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out631            -------------------------------
GCA_000004655.2_ASM465v1_rm.out652            GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out684            TGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out747            GTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out748            GTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out750            TGCGTCTTTC---------------------
GCA_000004655.2_ASM465v1_rm.out765            -------------------------------
GCA_000004655.2_ASM465v1_rm.out801            TCACGTTT---TTC-----------------
GCA_000004655.2_ASM465v1_rm.out807            GCGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out809            GCGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out824            CGCTTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out850            -------------------------------
GCA_000004655.2_ASM465v1_rm.out865            TGCTTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out899            TTTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out911            TATGGTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out928            CGTGTCTTTC---------------------
GCA_000004655.2_ASM465v1_rm.out942            TTTTT--------------------------
GCA_000004655.2_ASM465v1_rm.out968            TCTTATTTCCTTGCCCCT-------------
GCA_000004655.2_ASM465v1_rm.out1000           CATCTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1002           -------------------------------
GCA_000004655.2_ASM465v1_rm.out1004           CG-----------------------------
GCA_000004655.2_ASM465v1_rm.out1007           CGCGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out1016           GCGTTTT------------------------
GCA_000004655.2_ASM465v1_rm.out1042           TATATTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1088           GTTTT--------------------------
GCA_000004655.2_ASM465v1_rm.out1208           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1209           GTGTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out1213           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out1243           CGCGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1267           GTGTATTT-----------------------
GCA_000004655.2_ASM465v1_rm.out1339           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out1357           CGTGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out1396           CGCGTTCTT----------------------
GCA_000004655.2_ASM465v1_rm.out1428           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1447           TGCGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1451           CGCGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1548           -------------------------------
GCA_000004655.2_ASM465v1_rm.out1558           -------------------------------
GCA_000004655.2_ASM465v1_rm.out1591           -------------------------------
GCA_000004655.2_ASM465v1_rm.out1607           TTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out1613           TATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1623           CG-----------------------------
GCA_000004655.2_ASM465v1_rm.out1642           CGCGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1658           CGTGTTTTTCATTAAAAACTGAAT-------
GCA_000004655.2_ASM465v1_rm.out1659           CATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1846           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1901           -------------------------------
GCA_000004655.2_ASM465v1_rm.out1906           CGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out1947           -------------------------------
GCA_000004655.2_ASM465v1_rm.out1950           TTCGTTTTTC---------------------
GCA_000004655.2_ASM465v1_rm.out1956           AACGTTATTT---------------------
GCA_000004655.2_ASM465v1_rm.out1979           ACATCTTTC----------------------
GCA_000004655.2_ASM465v1_rm.out2010           TTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out2030           CGTGTTTTTTT--------------------
GCA_000004655.2_ASM465v1_rm.out2040           CGCGTCT------------------------
GCA_000004655.2_ASM465v1_rm.out2046           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2054           CGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2071           TACGT--------------------------
GCA_000004655.2_ASM465v1_rm.out2076           TACGT--------------------------
GCA_000004655.2_ASM465v1_rm.out2162           ACATGTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2192           CGCCATTTTTT--------------------
GCA_000004655.2_ASM465v1_rm.out2196           TCGTGTCTT----------------------
GCA_000004655.2_ASM465v1_rm.out2237           GCGTTTT------------------------
GCA_000004655.2_ASM465v1_rm.out2238           GCGTTTT------------------------
GCA_000004655.2_ASM465v1_rm.out2276           TGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2283           CATATT-------------------------
GCA_000004655.2_ASM465v1_rm.out2329           GTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out2374           CACGTCT------------------------
GCA_000004655.2_ASM465v1_rm.out2376           TATGTTTTTTTTCACCCAATTAATT------
GCA_000004655.2_ASM465v1_rm.out2378           TGTGT--------------------------
GCA_000004655.2_ASM465v1_rm.out2380           GTCTTTTTTTTATTAGTGA------------
GCA_000004655.2_ASM465v1_rm.out2392           GATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2395           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2415           TGTGTCCTT----------------------
GCA_000004655.2_ASM465v1_rm.out2441           AGCGGTTTTATTTTT----------------
GCA_000004655.2_ASM465v1_rm.out2462           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2468           TATATTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2495           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2514           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2528           TACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2545           GTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out2586           CACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2589           TACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out2591           GCGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out2695           CGTGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out2703           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2724           CGTGTT-------------------------
GCA_000004655.2_ASM465v1_rm.out2778           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2800           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2811           -------------------------------
GCA_000004655.2_ASM465v1_rm.out2866           CGTGTTTTTTT--------------------
GCA_000004655.2_ASM465v1_rm.out2977           CACATATTTTATT------------------
GCA_000004655.2_ASM465v1_rm.out3072           CATATTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3073           TGTCTT-------------------------
GCA_000004655.2_ASM465v1_rm.out3106           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out3111           CACATCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3121           GTCTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out3279           -------------------------------
GCA_000004655.2_ASM465v1_rm.out3323           TGCGTCT------------------------
GCA_000004655.2_ASM465v1_rm.out3327           CCTTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out3376           CG-----------------------------
GCA_000004655.2_ASM465v1_rm.out3388           -------------------------------
GCA_000004655.2_ASM465v1_rm.out3390           TGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3444           TCGTCTTTTT---------------------
GCA_000004655.2_ASM465v1_rm.out3446           TACGCCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3494           CGCGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out3555           ACGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out3579           TGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3603           G------------------------------
GCA_000004655.2_ASM465v1_rm.out3653           -------------------------------
GCA_000004655.2_ASM465v1_rm.out3654           ATACT--------------------------
GCA_000004655.2_ASM465v1_rm.out3682           TGTGTCCTT----------------------
GCA_000004655.2_ASM465v1_rm.out3683           TGTGT--------------------------
GCA_000004655.2_ASM465v1_rm.out3857           TACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3866           TGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out3900           AGTGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out3901           CGCGTT-------------------------
GCA_000004655.2_ASM465v1_rm.out3914           -------------------------------
GCA_000004655.2_ASM465v1_rm.out3917           TGCGTACTTC---------------------
GCA_000004655.2_ASM465v1_rm.out3974           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4017           TTCTTCTTTTTT-------------------
GCA_000004655.2_ASM465v1_rm.out4076           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4091           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4186           AGGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4187           ACGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4258           ATGTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4377           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4390           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4484           TG-----------------------------
GCA_000004655.2_ASM465v1_rm.out4489           AGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out4490           AGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out4526           GTATTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4558           AGCGTGCTTGTGTT-----------------
GCA_000004655.2_ASM465v1_rm.out4570           G------------------------------
GCA_000004655.2_ASM465v1_rm.out4615           TATGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out4660           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4662           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4672           TGCGTCTGTTTTGTTGTC-------------
GCA_000004655.2_ASM465v1_rm.out4673           GTT----------------------------
GCA_000004655.2_ASM465v1_rm.out4689           GCCTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4727           TGTGGTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out4779           ATT----------------------------
GCA_000004655.2_ASM465v1_rm.out4831           CGCGTT-------------------------
GCA_000004655.2_ASM465v1_rm.out4833           CATGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out4858           GACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out4861           -------------------------------
GCA_000004655.2_ASM465v1_rm.out4885           CGCGTCTT-----------------------
GCA_000004655.2_ASM465v1_rm.out4963           CATGTT-------------------------
GCA_000004655.2_ASM465v1_rm.out5017           TGCGTT-------------------------
GCA_000004655.2_ASM465v1_rm.out5023           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5080           CACACGTTTTTTTAGC---------------
GCA_000004655.2_ASM465v1_rm.out5095           CGCGTCTTTTAGGTTTGTTTTGCTCTTGAA-
GCA_000004655.2_ASM465v1_rm.out5135           CGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5152           TACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5194           CGAGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out5216           CATTTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5219           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5240           ATAATTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out5271           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5272           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5279           TACGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5418           TGCGTATTT----------------------
GCA_000004655.2_ASM465v1_rm.out5435           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5441           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5454           AACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5656           CGTCTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5661           GTATCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out5668           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5721           -------------------------------
GCA_000004655.2_ASM465v1_rm.out5743           TATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5744           TATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5748           CACGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5776           TGCGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5777           TGCGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out5856           TGCGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out5947           AATGGTTGTGTCTTT----------------
GCA_000004655.2_ASM465v1_rm.out6004           TGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6015           CGTG---------------------------
GCA_000004655.2_ASM465v1_rm.out6037           T------------------------------
GCA_000004655.2_ASM465v1_rm.out6078           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out6112           CATGTCCTT----------------------
GCA_000004655.2_ASM465v1_rm.out6152           TACATTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6153           -------------------------------
GCA_000004655.2_ASM465v1_rm.out6159           CGCGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6257           CATGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6271           CGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6286           TGCGTT-------------------------
GCA_000004655.2_ASM465v1_rm.out6295           TATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6298           TGTATTT------------------------
GCA_000004655.2_ASM465v1_rm.out6299           TGTATTT------------------------
GCA_000004655.2_ASM465v1_rm.out6301           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6317           TGTGT--------------------------
GCA_000004655.2_ASM465v1_rm.out6342           -------------------------------
GCA_000004655.2_ASM465v1_rm.out6376           ACGTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out6378           TACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6486           -------------------------------
GCA_000004655.2_ASM465v1_rm.out6490           TGTGTTTGTTTTATT----------------
GCA_000004655.2_ASM465v1_rm.out6548           GCCTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out6559           GCGTCT-------------------------
GCA_000004655.2_ASM465v1_rm.out6564           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out6581           -------------------------------
GCA_000004655.2_ASM465v1_rm.out6588           -------------------------------
GCA_000004655.2_ASM465v1_rm.out6654           TGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6691           TGCTTTTTC----------------------
GCA_000004655.2_ASM465v1_rm.out6695           CTCCACTCTTTT-------------------
GCA_000004655.2_ASM465v1_rm.out6724           TATGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out6733           CACGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6736           TGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6742           TGTGTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out6752           TACATTTTTTTTTACACCATGTCACAGAATT
GCA_000004655.2_ASM465v1_rm.out6753           GTGTCTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out6840           CATGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out6889           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7009           CGTGTCTT-----------------------
GCA_000004655.2_ASM465v1_rm.out7109           TGTATTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7150           CGTGTCT------------------------
GCA_000004655.2_ASM465v1_rm.out7189           CGTATTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7196           CGTCTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7435           TGTGTTTTTC---------------------
GCA_000004655.2_ASM465v1_rm.out7520           GTTTTT-------------------------
GCA_000004655.2_ASM465v1_rm.out7521           ATGTTTTT-----------------------
GCA_000004655.2_ASM465v1_rm.out7540           TGTGTTTTTTT--------------------
GCA_000004655.2_ASM465v1_rm.out7575           TGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7585           TGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7586           TACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7618           TACGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7633           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7713           CGTGTCTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7715           CACGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7727           GTGT---------------------------
GCA_000004655.2_ASM465v1_rm.out7759           CGTGTTTTT----------------------
GCA_000004655.2_ASM465v1_rm.out7770           TGCGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4     TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out15    CACGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out27    CG-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out46    TGAGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out61    AATGGGTTTTT--------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out89    CGTGCT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out173   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out257   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out265   TGCGGTCTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out327   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out386   CGCGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out469   TATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out537   CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out574   CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out576   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out577   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out677   GTTTTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out679   TGCGTCTTTC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out695   TT-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out736   TCACGTTT---TTC-----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out743   ACGTCTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out749   AGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out757   CGCTTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out781   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out795   TGCTTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out829   TTTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out855   TATGGTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out871   CGTGTCTTTC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out876   CACTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out897   TCTTATTTCCTTGCCCCT-------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out922   -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out957   TATATTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1052  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1055  TGTGTTTGTTTTATT----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1079  GTGT---------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1116  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1122  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1149  TCGCATTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1155  CGTGTTT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1177  TACGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1182  CCTAATATTCGTG------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1223  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1282  TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1285  ACGTCTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1298  TACATTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1299  GTGTCTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1400  CATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1551  CGTGTCTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1586  CGTGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1607  ACATCTTTC----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1630  TGTATTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1719  CGTCTTTTTTACTAC----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1727  TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1728  CGCCTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1749  TGCGTTTCT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1821  CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1979  TGTGTTTTTC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2042  TATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2067  TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2068  TAAGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2104  TATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2117  CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2146  TATGTCTTTTTATTTGATTTTAAATT-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2154  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2156  CG-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2159  CGCATTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2168  TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2206  TACTTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2261  TGCGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2330  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2338  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2359  GTGTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2366  GCGTCTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2399  CGCGTCTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2430  GTGTATTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2472  CGTGTTTTTC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2484  TGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2501  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2507  TACGATTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2552  CACGTTCTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2598  TATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2603  TGCGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2616  TGCGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2620  CGCGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2732  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2733  CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2741  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2769  C------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2788  CATTTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2808  CG-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2827  CGCGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2847  TGTGATTTTCATTAAAAACTGAAT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2848  CATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2892  CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2924  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2950  GCCATT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2960  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3015  CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3069  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3116  TTCGTTTTTC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3124  AACGTTATTT---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3182  CGTGTTTTTTT--------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3185  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3191  CGCGTCT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3200  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3216  TACGT--------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3262  CGCATTT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3296  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3297  TACATTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3343  CGCCATTTTTT--------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3347  TCGTGTCTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3372  GCGTTTT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3403  CATATT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3444  GTTTTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3470  TC-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3471  TATGTATTTTTTCACCCAATTAATT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3473  TGTGTCT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3479  GTCTTTTTTTTATTAGTGA------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3486  GATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3489  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3508  TGTGTCCTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3533  AGCGGTTTTATTTTT----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3544  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3556  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3564  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3590  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3606  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3629  CTCGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3673  CACGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3684  TACGTGTTTT---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3686  GCGTCTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3766  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3816  TGCTTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3840  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3879  TATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3930  TGAGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4054  TGTCTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4086  TGTGTCTCT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4091  CACATCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4099  GTCTTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4122  CATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4132  TGCTTTTTC----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4135  CTCCACTCTTTT-------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4159  CGCGTCTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4169  TGCGT--------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4252  TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4283  TGCGT--------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4287  TTTTTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4297  CGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4338  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4341  TGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4401  TCGTCTTTTT---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4403  TACGCCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4430  CACTTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4446  CACGTCTATTTT-------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4454  CGTGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4484  GCGTCTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4533  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4596  TGTGTCCTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4639  TGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4763  TATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4775  TGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4801  CGCGTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4819  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4822  TGCGTACTTC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4858  TATGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4918  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4928  AACTTCTTCTTTTTT----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4956  CGTGATTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4980  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4987  TGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4999  CGCGTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5071  TACGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5135  CATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5289  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5382  AGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5430  CGTGCCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5461  G------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5507  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5509  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5520  GTTATT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5544  GCCTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5582  TACGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5602  ATT----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5640  ACGTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5684  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5762  CGCGTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5779  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5791  CATGTT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5872  GTGTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5887  CACACGTTTTTTTAGC---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5898  CGTGTCTTTTATGTTTGTTTTGCTCTTGAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5920  ATGTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5955  CTTCCCTAATATTCGCGT-------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5956  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5984  TATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6043  TATATTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6090  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6092  TGCGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6209  TGCGTATTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6238  AACGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6341  TGTGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6413  TCTGT--------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6447  CGTCTTTTTTTATTTATCCCT----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6451  GTATCTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6454  -------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6518  AGTGTTTTGTTT-------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6539  TATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6552  CGCGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6562  GCGTTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6578  TGCGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6622  TGCGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6644  CGTGTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6767  CGTGCTAATAATTTTGTTTTT----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6827  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6866  CGTCTTTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6906  CGCGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7004  CATGTTTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7018  CGTGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7045  TATGTCTTT----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7047  TGTATTT------------------------
//
