# STOCKHOLM 1.0

#=GS           GCA_000004655.2_ASM465v1_rm.out126 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out180 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out328 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out372 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out373 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out391 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out395 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out396 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out561 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out633 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out662 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out718 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out818 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out838 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out884 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out910 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1025 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1172 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1226 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1247 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1320 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1324 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1437 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1649 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1679 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1680 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1774 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1790 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1954 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1969 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1993 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2028 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2082 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2084 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2085 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2090 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2099 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2177 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2178 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2191 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2218 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2246 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2310 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2311 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2315 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2388 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2430 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2502 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2507 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2649 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2658 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2710 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2711 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2738 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2793 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2794 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2822 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2823 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2851 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2853 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2861 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2960 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2961 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2982 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3062 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3162 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3207 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3276 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3315 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3316 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3338 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3461 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3530 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3540 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3549 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3574 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3582 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3596 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3598 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3679 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3681 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3779 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3838 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3988 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4037 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4038 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4039 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4041 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4043 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4141 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4184 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4190 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4193 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4217 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4331 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4429 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4474 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4537 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4544 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4603 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4680 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4711 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4856 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5024 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5043 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5202 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5208 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5228 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5229 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5245 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5457 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5480 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5492 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5541 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5599 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5606 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5711 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5712 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5720 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5814 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5822 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5838 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5849 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5859 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5860 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5861 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5885 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5959 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6058 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6090 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6091 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6198 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6199 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6200 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6211 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6243 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6327 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6354 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6420 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6421 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6422 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6423 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6440 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6447 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6448 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6525 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6526 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6643 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6699 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6854 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6997 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7043 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7044 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7091 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7163 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7236 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7276 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7318 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7359 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7378 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7392 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7396 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7406 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7407 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7414 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7421 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7513 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7539 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7660 DE    SINE
#=GS    GCA_000576065.1_Oryza_nivara_v1.0_rm.out1 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out128 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out156 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out157 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out197 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out320 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out340 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out342 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out392 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out482 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out551 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out559 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out586 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out642 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out753 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out769 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out813 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out831 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out854 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out910 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out989 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out990 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990 DE    SINE

GCA_000004655.2_ASM465v1_rm.out126            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out180            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            ---------------------CCTAGTGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out373            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out391            -------------GGACCTGTAGCCTAACGAATAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out395            -----------GGGCATGTACCCTAGCGGTTATAAGGCTTAA--------
GCA_000004655.2_ASM465v1_rm.out396            -----------GGGCATGTACCCTAGCGGTTATAAGACTTAA--------
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out662            -----------GAGCCTTTAGCTGAGTTGGTCAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out718            -----------GGGCATGCAACCTAGTAGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            -----------GGGCATGTAGCCTAGTGGTTACAAGGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out884            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out910            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1025           -----------GGACCTCTAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out1172           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1226           ----------------------ATAATGCTTTAG----------TAGC--
GCA_000004655.2_ASM465v1_rm.out1247           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1680           ----------------TGTAACCTAGCAGTTACAGT-GATAA--------
GCA_000004655.2_ASM465v1_rm.out1774           -----------GGGACTGTAGCCTAGCGGTTACAGTGCTTAA--------
GCA_000004655.2_ASM465v1_rm.out1790           -----GCGAAAGTGGCTATAGCCTAGCGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out1954           -----------GGATTTGTAGCCTAGTGGTTACAATACTTTA--------
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           -------------------------------------GC---------TC
GCA_000004655.2_ASM465v1_rm.out2028           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2082           -------------GCCTGTAGCCTAGTGTTTATAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out2084           -------------GCCTGTAGCCTAGTGTTTATAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out2085           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           -----------GGGCTTATAGCTTAGGGGTTACAGTGCTCGA--------
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2178           -----------GGGCCTATAGCCTAGCGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out2191           -----------GGGCCTCTAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out2218           -----------GGGTCTGTAGCCTAGCGATTACGGTGCTCAT--------
GCA_000004655.2_ASM465v1_rm.out2246           -----------------------------------TACTCTA--------
GCA_000004655.2_ASM465v1_rm.out2310           ------------------TAGCCTAGCGGTTACAGTAGTCAA--------
GCA_000004655.2_ASM465v1_rm.out2311           -----------------TGTAGCGTATCGTTACAGTGGTCAA--------
GCA_000004655.2_ASM465v1_rm.out2315           -----------------TGTAGCGTATCGTTACAGTGGTCAA--------
GCA_000004655.2_ASM465v1_rm.out2388           --------------------GCCTAGCGGTTATAGTACTCAA--------
GCA_000004655.2_ASM465v1_rm.out2430           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2502           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2507           -----------GAACCTATAGCTTATCGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out2649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2658           -----------GGGTCTATG---------GCCAGTGGTTACA--TCAGTC
GCA_000004655.2_ASM465v1_rm.out2710           ---------------CTATAGCCTAGCGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2793           -----------GGGTATGCAGCCTAGTA-----------TTT--GCACTT
GCA_000004655.2_ASM465v1_rm.out2794           -----------GGGTATGCAGCCTAGTA-----------TTT--ACACTT
GCA_000004655.2_ASM465v1_rm.out2822           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2823           -----------GGGCATATAGCCTAGAAGTTACAT--ACCAA--------
GCA_000004655.2_ASM465v1_rm.out2851           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2853           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2861           --------------CCTCTAGCCTAGCAGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out2960           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2961           ------------GGTCTGTAGCCTATGGTTTATG--GTTGTA--ACACTC
GCA_000004655.2_ASM465v1_rm.out2982           ------------------------------------GATTACAGTGACCT
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           -----------GAGTCTATAACCTAGTGGTTGCAGCACTGCA--------
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3461           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3530           -----------------------TAGCAGTTACAATGCTTAA--------
GCA_000004655.2_ASM465v1_rm.out3540           ---------------------------------AGTGGTTGCAGTGATCC
GCA_000004655.2_ASM465v1_rm.out3549           -----------GGGCCTATATAGCCTAGGTTACAGCGCTCAC--------
GCA_000004655.2_ASM465v1_rm.out3574           ---------------CTCTAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out3582           -----------GGATCTGTAGCCTAGTGTTGTAC----------GCTC--
GCA_000004655.2_ASM465v1_rm.out3596           -----------GGGGTTGTAGCCTAGTGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           -----------------------------TTAAAGTCCTCAA--------
GCA_000004655.2_ASM465v1_rm.out3838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3988           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4037           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4038           -----------GGGCCCTTAGCCTAGTGGCTGCAGGCTTACA--GTGCTC
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4141           ---------------------------------------TCA--------
GCA_000004655.2_ASM465v1_rm.out4184           ------------GAGCCATAGCCTAGCGGTCATGGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out4190           -------------------------------------GC---------TC
GCA_000004655.2_ASM465v1_rm.out4193           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4331           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4537           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4544           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4603           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4680           -----------GGGCTTGTAGCCTAGCGGTTACAAGGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out4711           -----------GGGCTTGCAGCCTAGCGGTTATAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out4856           -----------------GTA------------------------------
GCA_000004655.2_ASM465v1_rm.out5024           -------GGGGTTGTACTCTAGGCATTGGTTACGGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out5043           -----------GGGCATGTAGTCTAGCGGTCACAATGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out5202           ------------GGGCCTGTAGCCAAAGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out5208           -----------GGCCCTTTAGCTGAGTTGGTTAGGTGGC---------T-
GCA_000004655.2_ASM465v1_rm.out5228           --------------CCTGTAGCCTAGCGATTAGAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out5229           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5245           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           -----------GGGTCTATAGCCTAGTGGTTGCAGCACTCTA--------
GCA_000004655.2_ASM465v1_rm.out5492           -------------------------------------GC---------TC
GCA_000004655.2_ASM465v1_rm.out5541           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           -----------GGGCCTCTAGCTGAGTTGGTTAGGTGC----------CT
GCA_000004655.2_ASM465v1_rm.out5711           ----------------------------------------------GCTC
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5720           ------------GGGTCTGTAGCCAGTGGCCACAACACTCTA--------
GCA_000004655.2_ASM465v1_rm.out5814           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5822           --------------CTTGTAATCTAGCGGTTAAAATGCTTAA--------
GCA_000004655.2_ASM465v1_rm.out5838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5849           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5859           --------------CCTATAGCCTAGCAGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out5860           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5959           -----------GGGGCTGTAGCATAGCGGTTACAGTGCTA-T--------
GCA_000004655.2_ASM465v1_rm.out6058           ------------GGCATGTAGCCTAGCGATTATAGCGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out6090           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           ------------GGTATGTAGCCTAGTGCTTGTAGCTCTCTA--------
GCA_000004655.2_ASM465v1_rm.out6211           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6243           -----------GGGCCTATAGCCTAGCGGTTACCGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out6327           ------------------TAGTTTAATGGTTTCAATACTCAA--------
GCA_000004655.2_ASM465v1_rm.out6354           -----------GGGTCTCTACCTGAGTTGGTTAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------TTACAGTGACCT
GCA_000004655.2_ASM465v1_rm.out6447           -------------GGGTCTATACTAGCGGTTATAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           -----------GGGCCTATAGCCTAGTGGTTACA----------GTGG--
GCA_000004655.2_ASM465v1_rm.out6526           -----------GGGCCTATAGCCTAGTGGTTACA----------GTGG--
GCA_000004655.2_ASM465v1_rm.out6643           --------------------GCCTAGTGGTTATAGT--------------
GCA_000004655.2_ASM465v1_rm.out6699           -----------GGGCATATAGTCTAACGGTTATAGTGCTTAG--------
GCA_000004655.2_ASM465v1_rm.out6854           -----------GGGCCTCTAGATGAATTGGTTAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out6997           -----------------GTAGCCTAGCGATTACAGTACTCAA--------
GCA_000004655.2_ASM465v1_rm.out7043           -----------GAGCATGTAACCTTTCGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out7044           -----------GAGCATGTAACCTTTCGGTTACAGTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------C---------TC
GCA_000004655.2_ASM465v1_rm.out7163           ----------------TGTAGCCTAGTGGTTGCGAAGCTCTA--------
GCA_000004655.2_ASM465v1_rm.out7236           -----------GGGCCTAAAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000004655.2_ASM465v1_rm.out7276           -------------GGGGTTGTCCTAACGGTTCCAATGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------TAGTGGTTACAGTGACCT
GCA_000004655.2_ASM465v1_rm.out7359           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7378           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7392           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7396           -----------AGTGAAAGGACCTGTGGGTTGTGGCCTAGCA--------
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           -----------------------CATTGC-----------------TC--
GCA_000004655.2_ASM465v1_rm.out7414           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7421           ----------------------CTAGCGGTTACATTGCTCAA--------
GCA_000004655.2_ASM465v1_rm.out7513           ------------GACATGTAGCCTAGTGATTATAGTGCCTAGTATA----
GCA_000004655.2_ASM465v1_rm.out7539           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7660           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   ---------------------CCTAGTGGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   -------------GGACCTGTAGCCTAACGAATAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   ---------------------------------AGTGGTTGCAGTGATCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   -----------GAGCCTTTAGCTGAGTTGGTCAGGTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   -----------GGGCATGCAACCTAGTAGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   -----------GGGCATGTAGCCTAGTGGTTACAAGGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   -----------GGGCTTGCAGCCTAGCGGTTATAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   ------------------TAGTTTACTGATTGCAATACTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------TTACAGTGACCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  -------------GGGTCTATACTAGCGGTTATAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  -----------------------TAGTGCTTGCAGT--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  -----------GGGCCTATAGCCTAGTGGTTACA----------GTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  -----------GGGTCTGTAGCCTAGCGATTACGGTGCTCAT--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  -----------GAGCATGTAACCTTTCGGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  -----------------GTAGCCTAGCGATTACAGTACTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------C---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  GCGAACAGGTCTGTAGTGTAGCCTAGTGGTTGCGAAGCTCTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  -------------GGGGTTGTCCTAACGGTTCCAATGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------TAGTGGTTACAGTGACCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  -----------------------TAGCAGTTACAATGCTTAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  -----------AGTGAAAGGACCTGTGGGTTGTGGCCTAGCA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  ----------------------CTAGCGGTTACATTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  -----------------GTAGTCTAGAGCTTACAATGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  -----------GGACCTCTAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  ----------------------ATAATGCTTTAG----------TAGC--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  -----------GGGACTGTAGCCTAGCGGTTACAGTGCTTAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  -----------GGATTTGTAGCCTAGTGGTTACAATACTTTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  -------------------------------------GC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  -------------GCCTGTAGCCTAGTGTTTATAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  -----------GGGCTTATAGCTTAGTGGTTACAGTGCTCGA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  -----------GGGCCTATAGCCTAGCGGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  -----------GGGCCTCTAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  ------------------TAGCCTAGCGGTTACAGTAGTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  -----------------TGTAGCGTATCGTTACAGTGGTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  -----------AGTGAAAGGGCCTAGCGGTTATAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  -----------GGGCATGTAGCCTAG------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  -----------GAACCTATAGATTATCGGTTACAATGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------AGCTTACCGTAC------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  ---------------CTATAGCCTAGCGGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  -----------GGGGCTGTAGCATAGCGGTTACAGTGCTA-A--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  -----------GGGTATGCAGCCTAGTA-----------TTT--ACACTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  -----------GGGCATATAGCCTAGAAGTTACAT--ACCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  --------------CCTCTAGCCTAGCAGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  ------------GGTCTGTAGCCTATGGGTTATG--GTTGTA--ACACTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  ------------------------------------GATTACAGTAACCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  -----------------------------------TACTCTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  -----------GAGTCTATAACCTAGTGGTTGCAGCACTGCA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  -----------GGGCATATAGTCTAACGGTTATAGTGCTTAG--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  -----------GGGCCTCTACCTGAGTTGGTTAGGTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  -----------------------------------------A--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  ------------------------CATTG-----------------CT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  -----------GGGCCTATATAGCCTAGGTTACAGCGCTCAC--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  ------------GGGCTCTAGCTGAGTTGGTTAGTTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  -----------GGGGTTGTAGCCTAGTGGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  -----------------------------TTAAAGTCCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  -------GGGGTTGTACTCTAGGCATTAGTTACGGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  ----------------TGTAACCTAGCAGTTACAGT-GATAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  ------------------TAGCCTAGCGGTCATGGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  -------------------------------------GC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  -----------GGGCCTCTAGCTGAGTTGGTTAGGTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  -----------GGGCTTGTAGCCTAGCGGTTACAAGGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  ----------------TGTAGTCTAGTGGTTGCAGTGGTTGCAGTGACCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  -----------GGGCATGTAGTCTAGCGGTCACAATGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  -----------------GTAGCCTAGTGATTATAGTGCCTAGTATA----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  -----------GGGCCTCTAGATGAATTGGTTAGGTGGC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  ------------GGGCCTGTAGCCAAAGGTTACAGTGCTCAG--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  -----------GGCCCTTTAGCTGAGTTGGTTAGGTGGC---------T-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------------CTTGTAGCCTAGCGATTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  -----------GGGTCTATAGCCTAGTGGTTGCAGCACTCTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  -------------------------------------GC---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  -----------GGGCATGTACCCTAGCGGTTATAAGGCTTAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  ------------GGTATGTAGCCTAGTGCTTGTAGCTCTCTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  ----------------------------------------------GCTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  ------------GGGTCTGTAGCCAGTGGCCACAACATTCTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  --------------CTTGTAATCTAGCGGTTAAAATGCTTAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  --------------CCTATAGCCTAGCAGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  ---------------CTATAGCCTAGTGGTTGCAGTGCTCTA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  ------------GGCATGTAGCCTAGCGATTATAGCGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  -----GCGAAAGTGGCTATAGCCTAGCGGTTACAGTGCTCAA--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  -----------GGGCCTATAGCCTAGCGGTTACCGTGCTCAA--------

GCA_000004655.2_ASM465v1_rm.out126            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out180            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            --GTAGCACCTCTAGATCC----TGGGT------TAAACTTCCCACAGGA
GCA_000004655.2_ASM465v1_rm.out373            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out391            --GTAGCACGTCTAGGTCC----TGGGT------TTGACTCCCCATGAAG
GCA_000004655.2_ASM465v1_rm.out395            --GTAGCACCTCTAGGTCC----TGGGT------TCGACTCCCCACGCTA
GCA_000004655.2_ASM465v1_rm.out396            --GTAGCACCTCTAGGTCC----TGGGT------TCGACTCCCCACGCTA
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out662            TAACAGCACTCCTCACTGG---A----T------TCGATTTTCCATGG--
GCA_000004655.2_ASM465v1_rm.out718            --GTAGCACCTCTAGGTCC----TGGAT------TCGACTCCCCATGGGA
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            --GTAGCAGCTCTAGGTCC---TGGGTTTGA-------CTCCCCACGG--
GCA_000004655.2_ASM465v1_rm.out884            ---------------------------------------CTACCAACAG-
GCA_000004655.2_ASM465v1_rm.out910            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1025           TAGTAGCACTCCTCAGGTC---CTGGGT------TCGACTCCTTGTGG--
GCA_000004655.2_ASM465v1_rm.out1172           ------------------------GGTT-------CCACACATCTTGGG-
GCA_000004655.2_ASM465v1_rm.out1226           -------AACTACCAGTTC---CCGAGT-------TTGACTCCACTAGC-
GCA_000004655.2_ASM465v1_rm.out1247           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           ------------GGGATTG---TAGCTT-------AGCGATTACAGTGC-
GCA_000004655.2_ASM465v1_rm.out1649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1680           --GTAGCACATCTAGGTTT---TGAGTTCGA-------CACCCCACGA--
GCA_000004655.2_ASM465v1_rm.out1774           --GTAGCACCTGTAGGTCA----TGGGT------TAACTCCCCACAGAAG
GCA_000004655.2_ASM465v1_rm.out1790           --GTAGCACTTC-TGGTCC---TGGGTTCGG-------CTCCCCAAGA--
GCA_000004655.2_ASM465v1_rm.out1954           --GTAGCACATACCAGTTT---CTTAGT------TCGACTTCTCTCGA--
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           TAGTAGCACTACTCGGGTC---CTGGGT------TTGACTTCCTGTGG--
GCA_000004655.2_ASM465v1_rm.out2028           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2082           --GTAGCACCTTCAGGTCC---TAGTTTCGA-------TTTTCCACGGG-
GCA_000004655.2_ASM465v1_rm.out2084           --GTAGCACCTTCAGGTCC---TAGTTTCGA-------TTTTCCACGGG-
GCA_000004655.2_ASM465v1_rm.out2085           ------------------------------------------CCACGGG-
GCA_000004655.2_ASM465v1_rm.out2090           --GCTT------TAGGTCC----TCGGC------TCGACTCCCC------
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2178           --GTTGCACCTCTATGTCC----TGGGT------TTGACTCCCCAGTCCC
GCA_000004655.2_ASM465v1_rm.out2191           TAGTAGCACTACTCAGATC---CTGGGT------TCGACTCCCCGTGG--
GCA_000004655.2_ASM465v1_rm.out2218           --GTAGCACCTCTAGGTCC----TGGGT------TCGACTCCCTACGTGA
GCA_000004655.2_ASM465v1_rm.out2246           --GTAGCACCTCTAGGTCC----TGGGC------CCAACTCTCTATAGAA
GCA_000004655.2_ASM465v1_rm.out2310           --GTAGTACATTTAGGTCC----AGGGT------TTAGGGTTTGACGCTT
GCA_000004655.2_ASM465v1_rm.out2311           --GTAGCACATTTAGGTCT----AGGGT------TTGACGCCCCACGATA
GCA_000004655.2_ASM465v1_rm.out2315           --GTAGCACATTTAGGTAT----AGGGT------TTGACGCCCCACGATA
GCA_000004655.2_ASM465v1_rm.out2388           --GTAAAACCTCTAGGTCT---TACGTTTGA-------CTCCCCACAG--
GCA_000004655.2_ASM465v1_rm.out2430           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2502           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2507           --GTAGCATTACAGATCCT---TGGTTCTA--------CTCTCCACGG--
GCA_000004655.2_ASM465v1_rm.out2649           ---------------------------G-------GTATGACTATCTAT-
GCA_000004655.2_ASM465v1_rm.out2658           TAGTAGCATCTACCAGTTCA--TGGGTT-------TGATTCCCCTTGAG-
GCA_000004655.2_ASM465v1_rm.out2710           --GTAGCATCTCTAGTTCT---AAGGTTTGA-------CTTCTTACGGG-
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           ----AG-CACTTAAGCATC---ACTTTT-------TTTCCTGGGTTCCT-
GCA_000004655.2_ASM465v1_rm.out2793           ATATGCCTGGTAGCACCTACTAGCTCAT-------GGG-TTCAACTCCG-
GCA_000004655.2_ASM465v1_rm.out2794           TTATGCATGGTAGCACCTACTAGCTCAT-------GGG-TTCAACTCTG-
GCA_000004655.2_ASM465v1_rm.out2822           ---------------------------------------------ATGG-
GCA_000004655.2_ASM465v1_rm.out2823           --GCAGTATATCTAGTTCT---TGGGTTTGA-------CTCCCCA-----
GCA_000004655.2_ASM465v1_rm.out2851           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2853           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2861           --GTAGCACCTCTAGGCCC----TAAGT------TCGACTCCCCAAGGGA
GCA_000004655.2_ASM465v1_rm.out2960           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2961           TAGTTGCACACACCAGCGCGCCTGGGTT-------CGA-GTCCTCTCAG-
GCA_000004655.2_ASM465v1_rm.out2982           GAGTAGTACCCCAAGTTTC---TGAGTTCAA-------ATCTCCTATG--
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           --GTAGCACCTACCAGCGC---CAGGGT------TCGACTCCCCTCAGGA
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           -AGTAGCACCTACCAGTCTC--TTGGAT-------TGACTTTCCTCGAG-
GCA_000004655.2_ASM465v1_rm.out3461           ---TAGCACCTACCAGCTCT--TAGGTT-------CGACTCCCTTTCAC-
GCA_000004655.2_ASM465v1_rm.out3530           --GCAGCACCTCTAGATCC----TGGGT------TTGACTTCCCAGTCCT
GCA_000004655.2_ASM465v1_rm.out3540           GAGTAATACCCTAAAGTTC---TTTGTTCAA-------ATCTTCATAG--
GCA_000004655.2_ASM465v1_rm.out3549           --ATAGCACCTCTAGGTCC---TGGGTTTGA-------TTCCCCATGG--
GCA_000004655.2_ASM465v1_rm.out3574           TAGTAACACTCGTCAGGTC---CTAGGT------TTGACTCTCAGTGG--
GCA_000004655.2_ASM465v1_rm.out3582           TAGTAG-CACATACTA--------GCTC-------CTAGGTTCGACTCG-
GCA_000004655.2_ASM465v1_rm.out3596           --GTAGCACCTCTAGGTCC---TTCATTCGA-------CTTTCCAAGG--
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           --GTAGCATCTCTAGATCT---TGGGTTTGA-------CTCTCCCTAAG-
GCA_000004655.2_ASM465v1_rm.out3838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3988           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4037           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4038           TTATAACACGTACCAGATCC--TTAGTT-------CGACTCTTCTTGAG-
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4141           --GTAGTACCTTAGGT-CC---TGGGT-------TCTACTCCCCATGG--
GCA_000004655.2_ASM465v1_rm.out4184           --GTAGCACCTCTAGGTCC----TAGGT------TCGACTCCCCATGGGA
GCA_000004655.2_ASM465v1_rm.out4190           TAGTAGCACTCCTTAGGTA---CTGGGT------TCGACTCCCCGTGG--
GCA_000004655.2_ASM465v1_rm.out4193           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4331           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           ----------------------TGGGTT-------CAACTCCCCCTTAG-
GCA_000004655.2_ASM465v1_rm.out4537           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4544           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4603           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4680           --GTTGCACCTCTACGTCC----TGGGT------TCGACTCCCCACGGGA
GCA_000004655.2_ASM465v1_rm.out4711           --GTAGCATCTCTAGGTCC----TGGGT------TCGACTCCCCATGGGA
GCA_000004655.2_ASM465v1_rm.out4856           GTCTAAGAGCTTACAATGCT--CAAATG-------GCACATTTAGGTCT-
GCA_000004655.2_ASM465v1_rm.out5024           --GTAGCACCTCCAACT-----------------------CTCCAAGG--
GCA_000004655.2_ASM465v1_rm.out5043           --GTAGCACCTCTAGATCC----TGGGT------TCGACTTTCCTCGAGA
GCA_000004655.2_ASM465v1_rm.out5202           --GTAGCACCTCTAGGTCC----TGGGT------TCAACTCCCCATGGGA
GCA_000004655.2_ASM465v1_rm.out5208           --GTAGCATTTTTCAGGTC---CTGGGT------TCGACTCCCCGTAG--
GCA_000004655.2_ASM465v1_rm.out5228           --GTAGCACCTCCAGGTCC---TGGGTTCAA-------CTCCCCACAT--
GCA_000004655.2_ASM465v1_rm.out5229           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5245           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           ----------------------------------------CCCCGTGG--
GCA_000004655.2_ASM465v1_rm.out5480           --CTAGCACCTACCAGTGT---CTGGGT------TCGACTCTACTCGGGA
GCA_000004655.2_ASM465v1_rm.out5492           TAGTAGCACTCCTCAGGTC---CTGGGT------TCGACTCCTTGTGG--
GCA_000004655.2_ASM465v1_rm.out5541           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           TAGTAGCACTGCTAATATT---CTCGGT------TTGATTCCTCCTAG--
GCA_000004655.2_ASM465v1_rm.out5711           AAGTAGCATCTTCCAGTTC---TGGGTTCGA-------TTA---------
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5720           --GTAGCACCTACCAGCGT----CTAGT------TCAACTCCCCTTGGGA
GCA_000004655.2_ASM465v1_rm.out5814           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5822           --ATATCATCCCTAGATCC---TCGATGCAC--------TCCCCGCGG--
GCA_000004655.2_ASM465v1_rm.out5838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5849           ---------------------------T-------TCGACTCTCCACAT-
GCA_000004655.2_ASM465v1_rm.out5859           --GTAGCACCTTTAGGTCC----TGGGT------TCAACTCCCCACGGGA
GCA_000004655.2_ASM465v1_rm.out5860           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           GCTTAAGTTGTG-CCTTTAG--GTTCTG-------GTTCGACTCCTCAT-
GCA_000004655.2_ASM465v1_rm.out5959           --GTAGCACCTCTAGT-CC---TGGGTTTGG-------CTCCCAAGG---
GCA_000004655.2_ASM465v1_rm.out6058           --GTAGTACCTCTAGGTCC---TTGATTCGA-------CTCACCCTGG--
GCA_000004655.2_ASM465v1_rm.out6090           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           --GTAGAGTTTATCAGCTC---CTGAGTTC------GACTCTCCTCGG--
GCA_000004655.2_ASM465v1_rm.out6211           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6243           --GTAGCACCTATAGGTCC----TAGGT------TCGACTCCCCACAAGA
GCA_000004655.2_ASM465v1_rm.out6327           --GTAGTACCTTTAGATAT---TAGATTGGG-------CTTCTCACGG--
GCA_000004655.2_ASM465v1_rm.out6354           TAGTAGCACTCCTCATTTC---CTGGGT------TCGACTCCCCGTAG--
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           AAATAGTACCCAAAGGTCC---TGAGTTCAA-------ATATCCTATG--
GCA_000004655.2_ASM465v1_rm.out6447           --GTAGCATCTATATAAAG---GTCCTAGAT---TTTACTCCCTATAG--
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           CCTTAG-TAGCAGCCCAGG---TCTGGT-------CTGGATCCCCGTGA-
GCA_000004655.2_ASM465v1_rm.out6526           CCTTAG-TAGCACCCCAGG---TCTGGT-------CTGGATCCCCGTGA-
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           --GTAGCATCTCTAGACTA---TAGGTTTGA-------CTCCCCATATG-
GCA_000004655.2_ASM465v1_rm.out6854           TAGTAGCACTCCTCAGGTC---CTATGT------TCGACTTCTAGTGG--
GCA_000004655.2_ASM465v1_rm.out6997           --GGAACATCTCTAGATCC----TTGGT------TCTACTCCTCACAGGA
GCA_000004655.2_ASM465v1_rm.out7043           --GTAGCACATAGAACCTA------GAT------TTAATTTCATATCGGA
GCA_000004655.2_ASM465v1_rm.out7044           --GTAGCACATAGAACCTA------GAT------TTAATTTCATATCGGA
GCA_000004655.2_ASM465v1_rm.out7091           TAGTAGCACTCCTCGGGTC---CTGGGT------TCGACTACCCGTAG--
GCA_000004655.2_ASM465v1_rm.out7163           --GTAGCACCTACTAGCTC---CCGGGT------TCGACTCCCCTCGGGA
GCA_000004655.2_ASM465v1_rm.out7236           TAGTAGCACTCCTCAGGTC---CTAGGT------TCGACTCCCCATGG--
GCA_000004655.2_ASM465v1_rm.out7276           --GTAGCACCTCTCTAGGT---CCTATATATAGGTTGAATTTTCCAGT--
GCA_000004655.2_ASM465v1_rm.out7318           GAGTAGTACCCCAAGGTCC---TGAGTTCAA-------ATCTCCTATG--
GCA_000004655.2_ASM465v1_rm.out7359           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7378           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7392           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7396           --GTAGCATCTCTAAATCT----TAGGT------TCGATTCTACATGGAA
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           -------AAGTAACACCTC---TATATT-------CAGGGTTAGACTCA-
GCA_000004655.2_ASM465v1_rm.out7414           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7421           --GTAGCACCTCTACGTCC---TGGGTTCAA-------CTCCCCAAGG--
GCA_000004655.2_ASM465v1_rm.out7513           --GCAGCATCCCCGTGGCC---TTAGT-------TTGACTCCCCATAG--
GCA_000004655.2_ASM465v1_rm.out7539           -----------------TCC--TCGGTT-------CGACTCCCCGTGGG-
GCA_000004655.2_ASM465v1_rm.out7660           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     --------ACCTTCTGGTC---ATGGGT-------TCGATTTCTTATAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   --GTAGCACCTCTAGATCC----TGGGT------TAAACTTCCCACAGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   --GTAGCACGTCTAGGTCC----TGGGT------TTGACTCCCCATGAAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   GAGTAATACCCTAAAGTTC---TGAGTTCAA-------ATCTTCATAT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   TAACAGCACTCCTCACTGG---A----T------TCGATTCTCCATGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   --GTAGCACCTCTAGGTCC----TGGAT------TCGACTCCCCATGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   --GTAGCAGCTCTAGGTCC----TGGGT------TTGACTCCCCACGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   ---------------------------------------CTACCAACAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   --GTAGCATCTCTAGGTCC----TGGGT------TCGACTCCCCATGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --GTAGCACCTTTAGATTT---TAGATTGGG-------CTCCTCACGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  GAGTAGTACCCAAAGGTCC---TGAGTTCAA-------ATATCCTATG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  --GTAGCATCTATATAAAG---GTCCTAGAT---TTTACTCCCTATAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  CCTTAG-TAGCACCCCAGG---TCTGGT-------CTGGATCCCCGTGA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  --GTAGCACCTCTAGGTCC----TGGGT------TCGACTCCCTACGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  ------------------------GGTT-------CGACACATCTTGGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  --GTAGCACATAGAACCTA------GAT------TTAATTTCATATCGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  --GGAACATCTCTAGATCC----TTGGT------TCTACTCCTCACAGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  TAGTAGCACTCCTCGGGTC---CTGGGT------TCGACTACCCGTAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  --GTAGCACCTACTAGCTC---CCGGGT------TCGACTCCCCTCGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --GTAGCACCTCTCTAGGT---CCTATATATAGGTTGAATTTTCCAGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  GAGTAGTACCCCAAGGTCC---TGAGTTCAA-------ATCTCCTATG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  --GCAGCACCTCTAGATCC----TGGGT------TTGACTTCCCAGTCCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  --GTAGCATCTCTAAATCT----TAGGT------TCGATTCTACATGGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --GTAGCACCTCTACGTCC---TGGGTTCAA-------CTCCCCAAGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --ATGGCACATTTAGGTCT---TGGGTTATT-------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  TAGTAGCACTCCTCAGGTC---CTGGGT------TCGACTCCTTGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  -------AACTACCAGTTC---CTGAGT-------TTGACTCCACTAGC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  ----------------------------------------CCCCGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  ------------GGGATTG---TAGCTT-------AGCGATTACAGTGC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  --GTAGCACCTGTAGGTCA----TGGGT------TAACTCCCCACAGGAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  --GTAGCACATACCAGTTT---CTTAGT------TCGACTTCTCTCGA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  TAGTAGCACTACTCGGGTC---CTGGGT------TCGACTTCCTGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --GTAGCACCTTCATGTCC---TAGTTTCGA-------TTTTCCACGGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  --GCTT------TAGGTCC----TCGGC------TCGACTCCCC------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  --GTTGCACCTCTATGTCC----TGGGT------TTGACTCCCCAGTCCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  TAGTAGCACTACTCAGATC---CTGGGT------TCGACTCCCCGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  --GTAGTACATTTAGGTCC----A-------------GGGTTTGACGCTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  --GTAGCACATTTAGGTCT----AGGGT------TTGACGCCCCACGATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  --ATAAAACCTCTAGGTCT---TACATTTGA-------CTCCCCACAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  ------------------------------------TGGTTTTGTAGCT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  --GTAGCATTACAGATCCT---TGGTTCTA--------CTCTCCACGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --GTAGCATCTCTAGTTCT---AAGGTTTGA-------CTTCTTACGGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --GTAGCACATCTAGT-CC---TGGGTTTGG-------CTCCCAAGG---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  ---------------------------G-------GTATGACTATCTAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  TTATGCATGGTAGCACCTACTAGCTCAT-------GGG-TTCAACTCTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  ---------------------------------------------ATGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --GCAGTATATCTAGTTCT---TGGGTTTGA-------CTCCCCA-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  -----------------------------------------GGTTACCG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  --GTAGCACCTCTAGGCCC----TAAGT------TCGACTCCCCAAGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  TAGTTGCACACACCAGCGCGCCTAGGTT-------CAA-GTCCTCTCAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  GAGTAGTACCCCAAGGTTC---TGAGTTCAA-------ATCTCCTATG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  --GTAGCACCTCTAGGTCC----TGGGC------CCAACTCTCTATAGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  --GTAGCACCTACCAGCGC---CAGGGT------TCGACTCCCCTCAGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  --GTAGCATCTCTAGACTA---TAGGTTTGA-------CTCCCCATATG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  TAGTAGCACTCCTTATTTC---CTGGGT------TCGACTCCCCGTAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --GTAGCACCTACCAGTCT---CTTGGA------TTGACTTTCCTCGA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  -------CAAGTAACACTC---TATATT-------CAGGGTTAGACTCA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  ---TAGCACCTACCAGCTCT--TGGGTT-------CGACTCCCTTTCAC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  --ATAGCACCTCTAGGTCC---TGGGTTTGA-------TTCCCCATGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  TAGTAACACTCGTCAGGTC---CTAGGT------TTGACTCTCAGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --GTAGCACCTCTAGGTCC---TTCATTCGA-------CTTTCCAAGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --GTAGCATCTCTAGATCT---TGGGTTTGA-------CTCTCCCTAAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --GTAGCACCTCCAACT-----------------------CTCCAAGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --GTAGCACATCTAGGTTT---TGAGTTCGA-------CACCGCACGA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  --GTAGCACCTCTAGGTCC----TAGGT------TCGACTCCCCATGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  TAGTAGCACTCCTTAGGTA---CTGGGT------TCGACTCCCCGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  TAGTAGCACTCTCAAGTCT---TAAG-T------TTGACTCCCCATGT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  ----------------------TGGGTT-------CAACTCTCCCTTAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  --GTTGCACCTCTACGTCC----TGGGT------TCGACTCCCCACGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  GAGTAACACCCCAAGATCC---TGAGTTCAA-------ATCTTTATAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  --GTAGCACCTCTAGATCC----TGGGT------TCGACTTTCCTCGAGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --GCAGCATCCCCGTGGCC---ATAGT-------TTGACTCCCCATAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  TAGTAGCACTCCTCAGGTC---CTATGT------TCGACTTCTAGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  --GTAGCACCTCTAGGTCC----TGGGT------TCAACTCCCCATGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  --GTAGCATTTTTCAGGTC---CTGGGT------TCGACTCCCCGTAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --GTAGCACCTCCAGGTCC---TGGGTTCAA-------CTCCCCACAT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  --CTAGCACCTACCAGTGT---CTGGGT------TCGACTCTACTCGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  TAGTAGCACTCCTCAGGTC---CTGGGT------TCGACTCCTTGTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  --GTAGCACCTCTAGGTCC----TGGGT------TCGACTCCCCACGCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  --GTAGAGTTTATCAGCTC---CTGAGTTC------GACTCTCCTCGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  AAGTAGCATCTTCCAGTTC---TGGGTTCGA-------TTA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  --GTAGCACCTACCAGCGT----CTAGT------TCAACTCCCCTTGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  --ATATCATCCCTAGATCC---TCGATGCAC--------TCCCCGCGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  ---------------------------T-------TCGACTCTCCACAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  --GTAGCACCTTTAGGTCC----TGGGT------TCAACTCCCCACGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  GCTTAAGTTGTG-CCTTTAG--GTTCTG-------GTTCGACTCCTCAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  --GTAGCACCAAGCAGCTC---CTGGGT------TTGAGTGCCCTTGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  --GTAGTACCTCTTGGTCC---TTGATTCGA-------CTCACCCTGG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --GTAGCACTTC-TGGTCC---TGGGTTCGG-------CTCCCCAAGA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  --GTAGCACCTATAGGTCC----TAGGT------TCGACTCCCCACAAGA

GCA_000004655.2_ASM465v1_rm.out126            --------------------------AGAAAAAGG---------------
GCA_000004655.2_ASM465v1_rm.out180            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            GGG-------AATTTCAGGCCTAGTTAAAA---AAT--TTACTCCTTGGC
GCA_000004655.2_ASM465v1_rm.out373            ----------------------------AAAAAAA---------------
GCA_000004655.2_ASM465v1_rm.out391            CG--------AATTTCAGGC-CTAGTTAAA-AAAAG--TCACTCACTGGC
GCA_000004655.2_ASM465v1_rm.out395            GCA-------AATTGAAGGC-CTAGTTAAA-AGAGC--TCACTT------
GCA_000004655.2_ASM465v1_rm.out396            GCA-------AATTGAAGGC-CTAGTTAAA-AGAGC--TCACTT------
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out662            -----GAGCGAATTCCAGGCTAGGGTTAAAAAAAAT-C------------
GCA_000004655.2_ASM465v1_rm.out718            GCG-------AATTTCAAGC-TTAGTTAGA-AAAGG--TCACTCATTGGC
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            -----GAGCGAATTTCAGGCC--TAGTTA-AAAAAA-GTCACTCGTTGGC
GCA_000004655.2_ASM465v1_rm.out884            -----GATCCAA-ATCCTGGCCTTGCACCAAA--A---------------
GCA_000004655.2_ASM465v1_rm.out910            ----------------------------AAAA--A---------------
GCA_000004655.2_ASM465v1_rm.out1025           -----GAGCGAATTTCAGGCTGGGGTTGAAAAAAAA-TCCCCTCGTT---
GCA_000004655.2_ASM465v1_rm.out1172           -----A-GAGGATTTTTGAGTTGGTTTTAATAAAG---------------
GCA_000004655.2_ASM465v1_rm.out1226           -----AAGTGAATTTTCGGACTTGATTTA--AAAA---------------
GCA_000004655.2_ASM465v1_rm.out1247           ----------------GGTCTAGCACCAAATA--A---------------
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           -----TCAAGTA-GTTCAGAGTTGGTTA---AAAA---------------
GCA_000004655.2_ASM465v1_rm.out1649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1680           -----GAGTGAATTTTAAGCC--TAATTA-AAAAAA-ATCACTTGTTGGC
GCA_000004655.2_ASM465v1_rm.out1774           CAC-------ATTTCTTTTCTGT---------------------------
GCA_000004655.2_ASM465v1_rm.out1790           -----GAGCGAATTTCAGGCT--TGAATA-AAGAAA--------------
GCA_000004655.2_ASM465v1_rm.out1954           -----AAGCGAATTTTTAGAGTTGGTTTA---------------------
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           -----GAGTGAATTTAGGCTGGGGTTAA--AAAAA---------------
GCA_000004655.2_ASM465v1_rm.out2028           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2082           ------AGCAAATTTCAAGTCTTTTTTTAAGAGAAA-ATCACTCGCTGAC
GCA_000004655.2_ASM465v1_rm.out2084           ------AGCAAATTTCAAGTCTTTTTTTAA-AAAAA-ATCACTCGCTGAC
GCA_000004655.2_ASM465v1_rm.out2085           ------AGCAAATTTCAAGTCTTTTTTTAA-AAAAA-ATCACTCGCTGAC
GCA_000004655.2_ASM465v1_rm.out2090           -ACTGGAGCGAATTTCAGGC-CTAGTTAAA-AAAAG--TCGCTCGTTGGC
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2178           CTTGGGAGCGAATTTTAGGC-CTAGTTGAA-AAAAG--TCATGTGCTGAC
GCA_000004655.2_ASM465v1_rm.out2191           -----GAGCAAATTTCAGGCTGGGGTTAAAAAAGTC-CCCTCGTCTG---
GCA_000004655.2_ASM465v1_rm.out2218           GCA-------AATTTCAGGCCTAGTTAAAA-AGG----TCACTTACTAGC
GCA_000004655.2_ASM465v1_rm.out2246           GCG-------AATTTCAGGT-CTAGTTAAA-AAAAA--TCACTTGCTAGC
GCA_000004655.2_ASM465v1_rm.out2310           CACGAGGGTGAATTTCAAGCCTAGTTAAAA---GAG--TCACTCGTTGGT
GCA_000004655.2_ASM465v1_rm.out2311           GTA-------AATT-TTAGGTCTAGTTAAA-ATAG---TCACTCGTTGGT
GCA_000004655.2_ASM465v1_rm.out2315           GTA-------AATTCTTAGGCCTAGTTAAA-ATAG---TCACTCGTTGGT
GCA_000004655.2_ASM465v1_rm.out2388           -----GAGCGAATTTCAGCTC--TAGTTA----------AACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out2430           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2502           -----GAGCGAA-TTTCAGATTAGGTAAAAAATTA---------------
GCA_000004655.2_ASM465v1_rm.out2507           -----GAACGAATTTTAGTACCAGTTAA----------------------
GCA_000004655.2_ASM465v1_rm.out2649           -----G----TAAGCGAATTTCAGGTTAAAAAAGA---------------
GCA_000004655.2_ASM465v1_rm.out2658           -----ATGGAAATTTTAAGAGTTAACTCTTAAACCA-A-CGTTG------
GCA_000004655.2_ASM465v1_rm.out2710           ------AGCGAATTTTAGAAC--TTTTTTTAAAAAA-GGAACACGCTGGT
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           -----TGGTGAA-TTTCAGACCTAGTTAAAAAAAA---------------
GCA_000004655.2_ASM465v1_rm.out2793           -----GTGTGAATTTTCAGAGTTGGTTTAAGAAAA---------------
GCA_000004655.2_ASM465v1_rm.out2794           -----GTGTGAATTTTCAGAGTTGGTTTAAGAAAA---------------
GCA_000004655.2_ASM465v1_rm.out2822           -----GAGAGAA-TTTTATGCCTAGTT-----------------------
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2853           ---------------------CTAGAA-----------------------
GCA_000004655.2_ASM465v1_rm.out2861           GCG-------AATTGCAGGC-CTACTTAAA-AAAAG--TCACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out2960           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2961           -----AAGCGAATTTCCAGAGTTGGTTTTAAAAAA---------------
GCA_000004655.2_ASM465v1_rm.out2982           -----GAGCGAATTTCAG--------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           ATG-------AATTTTCAGAGTTGGTTTAA-AAAGG--TCACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           ------------------TTAAAAAATATCACTCC---------------
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           -----AGTGAATTTTCAGA-GTTAGTT-----------------------
GCA_000004655.2_ASM465v1_rm.out3461           -----G-AGTGAATTTTCAGTTGGTGTAAAAAAAA---------------
GCA_000004655.2_ASM465v1_rm.out3530           CGCTGGAGCGAATTTTAGGC-CTAGTTAGA-AAAGG--TCACTTGTTGGC
GCA_000004655.2_ASM465v1_rm.out3540           -----GAGCGAATTTTAG--------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           -----AAGCGAATTTCAGGCC-----------------------------
GCA_000004655.2_ASM465v1_rm.out3574           -----GAGTGAATTTTAGGCTGGGGTTAAAAAAAAT-CCCCTGT------
GCA_000004655.2_ASM465v1_rm.out3582           -----GTGTGAATTTTCAGAGTTGCATTA-AAAAA---------------
GCA_000004655.2_ASM465v1_rm.out3596           -----GAGCAAATTTCATGCT--TGAATA-AAAGAA--------------
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           ----GGAGCAAATTTCAAGCA--TGAATA-AAA-----------------
GCA_000004655.2_ASM465v1_rm.out3838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3988           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4037           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4038           -----AAGCGAATTTTCAAAGTTTGTTTTGAAAAG---------------
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4141           -----GAGCGATGGATT---------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           TCG-------AATTTTAGGT-TTGGTTAAA-AAAGG--TCACTCGTTGTC
GCA_000004655.2_ASM465v1_rm.out4190           -----GAGTGAATTTCAGCTTGGGGTTAAAAAAATT-C-CCCTCGTC---
GCA_000004655.2_ASM465v1_rm.out4193           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           -------------------------------A--A---------------
GCA_000004655.2_ASM465v1_rm.out4331           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           -----GGGCAAATTTTTAGAGTTGATTTA--AAAG---------------
GCA_000004655.2_ASM465v1_rm.out4537           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4544           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4603           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4680           GCA-------AATTTCAGGC-CTGGTTAGA-AAAGT--TCACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out4711           GCG-------AATTTCAGGCCTTGCTTAAA-AAAGG--TCACTCGTTGGC
GCA_000004655.2_ASM465v1_rm.out4856           -----TGGGTTATTTCAAGCCTAGAAAAAAAAAGG---------------
GCA_000004655.2_ASM465v1_rm.out5024           -----GAGCGAATTCCAATCT--TAAATAAAAGAA---------------
GCA_000004655.2_ASM465v1_rm.out5043           GCG-------AATTTTAGGC-CTACTTAAA-AAAAATGTTACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out5202           GCA-------AATTTCAGGC-CTAG-------------------------
GCA_000004655.2_ASM465v1_rm.out5208           -----GAGCGAATTTTAGACTGGGGTTAAAAAAATC-CCCTCTCTAT---
GCA_000004655.2_ASM465v1_rm.out5228           -----AAGCGAATTACAGGCC--TAGTTA-AAAAAA-GTCACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out5229           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5245           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           -----GAGCGAATTTTAGGCT-----------------------------
GCA_000004655.2_ASM465v1_rm.out5480           GCG-------AATTTTCAGAGTTGGTTTAAGAAACA--TCACACGCTGGC
GCA_000004655.2_ASM465v1_rm.out5492           -----GAGAGAATTTCAGGCTGGGGTTAAAAAAAAT-C-CCCTTGTC---
GCA_000004655.2_ASM465v1_rm.out5541           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           -----GAGTGAATTTCAGG-------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           -----------------------------------------TCCGTTTGA
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5720           GCA-------AGTTTTCAGGGTTGGTTTTAAAAAGG--ACACTCGCTGGC
GCA_000004655.2_ASM465v1_rm.out5814           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5822           -----GAGCAAATTTCAGACCTAAGTTAAAAAATAA-AGTTACTTGTTGA
GCA_000004655.2_ASM465v1_rm.out5838           ----------------------------AAAAAGG---------------
GCA_000004655.2_ASM465v1_rm.out5849           -----GAACGGA-TTTCAGACGTGGTTA---AAAA---------------
GCA_000004655.2_ASM465v1_rm.out5859           GGG-------AATTTCAGGC-CTAGTTAAA-AAAAG--TCACTTGTTGGC
GCA_000004655.2_ASM465v1_rm.out5860           ----------AATTTTAGACC----TAATTAAAAA---------------
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           -----GTAGGTGAATTGAGGCTTGGTTAAAAATAG---------------
GCA_000004655.2_ASM465v1_rm.out5959           -----GAGCAAATTTTTGGCT--TAATCG-AAGAAA--------------
GCA_000004655.2_ASM465v1_rm.out6058           -----ATGAAAAATTCACGCA--TACTTA-AAAAAA-CTCACGCGCTAGC
GCA_000004655.2_ASM465v1_rm.out6090           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6091           --------CGAATTTTCAGAG-TTGTTAAAAAAAG---------------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           -----GATGAATTTGCAATGT-TGATTTAGCAAAGG-ATCACT-------
GCA_000004655.2_ASM465v1_rm.out6211           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6243           GTG-------AATTTCAAGC-CTGGTTAAA-AAACA--TCACTCGTTGGC
GCA_000004655.2_ASM465v1_rm.out6327           -----GAGTGAATTTCAAGACTGGTTGCGGTAACCC-GGTACTA------
GCA_000004655.2_ASM465v1_rm.out6354           -----GAGCAAATTTCAAGCTGGGGTTACAACTTAC-AAAACCCCCT---
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           -----GAGCGAATTTCAG--------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           -----GTTCGAATTTTAGGGCTTTTTTTAAAATTCA-CTCCCTGGCTATT
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           -----GAGCGAA-TTTCGGGCTGGGTA----AAAA---------------
GCA_000004655.2_ASM465v1_rm.out6526           -----GAGCGAA-TTTCGGGCTGGGTA----AAAA---------------
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           ------AGCGGATTTTAAGCCTGGTTAAA------------AAAGTAAGC
GCA_000004655.2_ASM465v1_rm.out6854           -----AGATAAGTTTTAGGCTAGGGTAAAAAAAAAA-TTCCCTCGT----
GCA_000004655.2_ASM465v1_rm.out6997           GCG-------AATTTCAGGC-CTAGTTAAA-AAAAG--TCATTCGCTAGC
GCA_000004655.2_ASM465v1_rm.out7043           -------GAGAATTTCAGATCTAGTTGAAA-AGAAT--TCACTCGTTAGA
GCA_000004655.2_ASM465v1_rm.out7044           -------GAGAATTTCAGATCTAGTTGAAA-AGAAT--TCACTCGTTAGA
GCA_000004655.2_ASM465v1_rm.out7091           -----AGCGAATTTC-AGACTGGGGTTAAAAAAA----------------
GCA_000004655.2_ASM465v1_rm.out7163           GCG-------AATTTTCAGAGTTGGTTTGAAAAAGG--TCACTCACTGGC
GCA_000004655.2_ASM465v1_rm.out7236           -----GAGCGAATTCTAGGCTATGGTTAAAAAAATC-CCCTCATT-----
GCA_000004655.2_ASM465v1_rm.out7276           -----AAGCGAATTTCAATCTTAAATAAAGAAAAAA-TTACTGTGGACCT
GCA_000004655.2_ASM465v1_rm.out7318           -----GAGCGAATTTCAG--------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           --------------------------A----AAAA---------------
GCA_000004655.2_ASM465v1_rm.out7378           ------------------------------AA--A---------------
GCA_000004655.2_ASM465v1_rm.out7392           ----------------------------AAAA--A---------------
GCA_000004655.2_ASM465v1_rm.out7396           GCG-------AATTTTAGGTCTT-TTAAAA-AAG----TTACTTGCTAGC
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           -----GTAATT---TTTAGACCTAGTCT---ATGA---------------
GCA_000004655.2_ASM465v1_rm.out7414           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7421           -----GAGCGAATTTCAGACT--TAAATA-AAGAAA--------------
GCA_000004655.2_ASM465v1_rm.out7513           -----GAGCGGATTTTCATGACTGCGTTAAAAAAA---------------
GCA_000004655.2_ASM465v1_rm.out7539           -----A-GCAAATTTCAGGCTGGGGTTAAAAATAT---------------
GCA_000004655.2_ASM465v1_rm.out7660           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     -----GAACGAA-TTTCATATCTAATT-----AAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   ----------------------------AAAAAGG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   ----------AATTTTAGACC----TAATTAAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   GGG-------AATTTCAGGCCTAGTTAAAA---AAG--TTACTCCTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   CG--------AATTTCAGGC-CTAGTTAAA-AAAAG--TCACTCACTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   -----GAGCGAATTTTAG--------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   ------------------GGTCTCGCTTAGGA--A---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   -----GAGCGAATTCTAGGCTAGGGTTAAAAAAAAT-C------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   GCG-------AATTTCAAGC-TTACTTAGA-AAAGG--TCACTCATTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   GCG-------AATTTCAGGC-CTAGTTAAA-AAAAG--TCACTCGTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   -----GATCCAA-ATCCTGGCCTTGCACCAAA--A---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   GCG-------AATTTCAGGCCTTGCTTAAA-AAAGG--TCACTCGTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   ----------------------------AAAA--A---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   -----GAGTGAATTTCA---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  -----GAGCGAATTTCAG--------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  -----GTTCGAATTTTAGGGCTTTTTTTAAAATTCA-CTCCCTGGCTATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  -----GAGCGAA-TTTCGGGCTGGGTA----AAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  GCA-------AATTTCAGGCCTAGTTAAAA-AGG----TCACTTACTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  -----A-GAGGATTTTTGAGTTGGTTTTAATAAAG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  -------GAGAACTTCAGATCTAGTTGAAA-AGAAT--TCACTCGTTAGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  GCG-------AATTTCAGGC-CTAGTTAAA-AAAAG--TCATTCGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  -----AGCGAATTTC-AGACTGGGGTTAAAAAAA----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  GCG-------AATTTTCAGAGTTGGTTTGAAAAAGG--TCACTCACTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  -----AAGCGAATTTCAATCTTAAATAAAGAAAAAA-TTACTGTGGACCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  -----GAGCGAATTTCAGATT-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  CGCTGGAGCGAATTTTAGGC-CTAGTTAGA-AAAGG--TCACTTGTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  ----------------------------AGAA--A---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  ----------------------------AAAA--A---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  GCG-------AATTTTAGGTCTT-TTAAAA-AAG----TTACTTGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  -----GAGCGAATTTCAGACT--TAAATA-AAGAAA--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------------TCAAGCC--TAGAAAAAAAAAG-GGGTCAAGCTGAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  -----GAGCGAATTTCAGGCTGGGGTTGAAAAAAAA-TCCCCTCGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  -----AAGTGAATTTTCGGACTTGATTTA--AAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  ----------------GGTCTAGCACCAAATA--A---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  -----GAGCGAATTTTAGGCT-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  -----TCAAGTA-GTTCAGAGTTGGTTA---AAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  CAC-------ATTTCTTTTCTGT---------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  -----AAGCGAATTTTTAGAGTTGGTTTA---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  -----GAGTGAATTTAGGCTGGGGTTAA--AAAAAC-C-CCATCGTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  ------AGCAAATTTCAAGTCTTTTTTTTA-AAAAA-ATCACTCGCTGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  -ACTGGAGCGAATTTCAGGC-CTAGTTAAA-AAAAG--TCGCTCGTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  CTTGGGAGCGAATTTTAGGC-CTAGTTGAA-AAAAG--TCATGTGCTGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  -----GAGCAAATTTCAGGCTGGGGTTAAAAAAGTC-CCCTCGTCTG---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  CACGAGGGTGAATTTCAAGCCTAGTTAAAA---GAG--TCACTCGTTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  GTA-------AATT-TTAGGTCTAGTTAAA-ATAG---TCACTCGTTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  -----GAGCGAATTTCAGCTC--TAGTTA----------AACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  -----GTCCGAA-TTTCAGATTAGGTAAAAAATTA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  -----GAACGAATTTTAGGACCAGTTAA----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  ------AGCGAATTTTAGAAC--TTTTTTTAAAAAA-GGAACACGCTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  -------GTGAA-TTTCAGACCTAGTTAAAAAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  -----GAGCAAATTTTAGGCT--TAATCA-AAGAAA--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  -----G----TAAGCGAATTTCAGGTTAAAAAAGA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  -----GTGTGAATTTTCAGAGTTGGTTTAAGAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  -----GAGAGAA-TTTTATGCCTAGTT-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  -----TGCTCAA-GTAGCATCACTAGG-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  GCG-------AATTGCAGGC-CTACTTAAA-AAAAG--TCACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  -----AAGCGAATTTCCAGAGTTGGTTTTAAAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  -----GAGCGAATTTCAG--------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  GCG-------AATTTCAGGT-CTAGTTAAA-AAAAA--TCACTTGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  ATG-------AATTTTCAGAGTTGGTTTAA-AAAGG--TCACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  ------AGCGGATTTTAAGCCTGGTTAAA------------AAAGTAAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  -----GAGCAAATTTCAAGC------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  ------------------TTAAAAAATATCACTCC---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  -----GAGTGAATTTTCAGAGTTAGTTTA---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  -----GTAATT---TTTAGACCTAGTCT---ATGA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  -----G-AGTGAATTTTCAGTTGGTGTAGAAAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  -----GAGCGAATTTCAGGCC-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  -----GAGTGAATTTTAGGCTGGGGTTAAAAAAAAT-CCCCTGT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  -----GAGCAAATTTCATGCT--TGAATA-AAATAA--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  ----GGAGCAAATTTCAAGCA--TGAATA-AAAGA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  -----GAGCGAATTCCAATCT--TAAATAAAAGAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  ----------------------------AAAAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  -----GAGTGAATTTTAAACC--TAATTA-AAAAAA-ATCACTTGTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  TCG-------AATTTTAGGT-TTGGTTAAA-AAAGG--TCACTCGTTGTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  -----GAGTGAATTTCAGCTTGGGGTTAAAAAAATT-C-CCCTCGTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  -----GAGTGAATTTTAGAAAAAAATTGTCGT--------------C---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  -----GGGCAAATTTTTAGAGTTGATTTA--AAAG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  GCA-------AATTTCAGGC-CTGGTTAGA-AAAGT--TCACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  -----GAGCGAATTTTAGATT-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  GCG-------AATTTTAGGC-CTACTTAAA-AAAAATGTTACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  -----GAGCGGATTTTCATGACTGCGTTAAAAAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  -----AGATAAGTTTTAGGCTAGGGTAAAAAAAAAT-TCCCTCGT-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  GCA-------AATTTCAGGC-CTAG-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  -----GAGCGAATTTTAGACTGGGGTTAAAAAAATC-CCCTCTCTAT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  -----AAGCGAATTACAGGCC--TAGTTA-AAAAAA-GTCACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  GCG-------AATTTTCAGAGTTGGTTTAAGAAACA--TCACACGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  -----GAGAGAATTTCAGGCTGGGGTTAAAAAAAAT-C-CCCTTGTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  GCA-------AATTGAAGGC-CTAGTTAAA-AGAGC--TCACTT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  -----GATGAATTTGCAATGT-TGATTTAGCAAAGG-ATCACT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  -----------------------------------------TCCATTTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  GCA-------AGTTTTCAGGGTTGGTTTTAAAAAGG--ACACTCGCTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  -----GAGCAAATTTCAGACCTAAGTTAAAAAATAA-AGTTACTTGTTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  ----------------------------AAAAAGG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  -----GAACGGA-TTTCAGACGTGGTTA---AAAA---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  GGG-------AATTTCAGGC-CTAGTTAAA-AAAAG--TCACTTGTTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  -----GTAGGTGAATTGAGGCTTGGTTAAAAATAG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  GCG-------AATTTTCAGAGTTGAATAAAAAAAAG--TCACTCGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  -----GTGAAAAATTCACGCA--TACTAA-AAAAAA-CTCACGCGCTAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------CGAATTTTCAGAG-TTGTTAAAAAAAG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  -----GAGCGAATTTCAGGCT--TGAATA-AAGAAA--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  GTG-------AATTTCAAGC-CTGGTTAAA-AAACA--TCACTCGTTGGC

GCA_000004655.2_ASM465v1_rm.out126            -----------------------------------CATTCATTGGT----
GCA_000004655.2_ASM465v1_rm.out180            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            CC----CTTATAAAAACA--TGTATTAAGAATCGACCTATGGAAGGCG-G
GCA_000004655.2_ASM465v1_rm.out373            -----------------------------------GTCACTCACGG----
GCA_000004655.2_ASM465v1_rm.out391            CT----CTCATAAAAACA--CGTGTTAAG---------------------
GCA_000004655.2_ASM465v1_rm.out395            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out396            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            CC----CTCATAAAAAC---------------------------------
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out884            -------------------------------AGGTCACTCGATGGTT---
GCA_000004655.2_ASM465v1_rm.out910            -------------------------------AGGTCACTCGCTGGTT---
GCA_000004655.2_ASM465v1_rm.out1025           ------------------------------------------TG--T---
GCA_000004655.2_ASM465v1_rm.out1172           -----------------------------------TACTCGCTAAC----
GCA_000004655.2_ASM465v1_rm.out1226           -------------------------------TGATCACTCACTCATC---
GCA_000004655.2_ASM465v1_rm.out1247           -------------------------------AGATTACTCATTGGTT---
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           -------------------------------AAATCACTTGCTAACC---
GCA_000004655.2_ASM465v1_rm.out1649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           ----------------------------------TCTTTTTTTAAAGG-A
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           ---------------------------GA-AAAGACCACTCGTTTCC---
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2082           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2084           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2085           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           CC----CTCACAAAAACC--CGTATTAAGAATCAACCTACG---------
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2178           CC----CTCATAAAAACA--CATGTT------------------------
GCA_000004655.2_ASM465v1_rm.out2191           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           CC----ATCGTAAAAACA--CATGTTAAGAATTGATGTATGAAGGATG-G
GCA_000004655.2_ASM465v1_rm.out2246           C-----CTCGTAAA--AAAATGTGTTAAGAATCGACCTATTAAGGGTG-G
GCA_000004655.2_ASM465v1_rm.out2310           CT----CTCATAGAAACA--TGTAAGAA----------------------
GCA_000004655.2_ASM465v1_rm.out2311           CT----CTCATAAAAATA--TGTATTAATAATTGAC-TATGGAGGATG-G
GCA_000004655.2_ASM465v1_rm.out2315           CT----CTCATAAAAATA--TGTATTAATAATTGAC-TATGGAGGATG-G
GCA_000004655.2_ASM465v1_rm.out2388           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2430           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2502           -------------------------------AGGTCACTTGTTGGTT---
GCA_000004655.2_ASM465v1_rm.out2507           ---------ATTTTAGGT--TCTCTTGTA-GGA-----------------
GCA_000004655.2_ASM465v1_rm.out2649           -----------------------------------TCACTTGTAGA----
GCA_000004655.2_ASM465v1_rm.out2658           -----------------------GTTTAA-AAAGTCACTCGCTGACCGT-
GCA_000004655.2_ASM465v1_rm.out2710           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           -------------------------------ATCTCTCTCTCTGATC---
GCA_000004655.2_ASM465v1_rm.out2793           --------------------------------GGTCATTCGCTGAT----
GCA_000004655.2_ASM465v1_rm.out2794           --------------------------------GGTCATTCGCTGGC----
GCA_000004655.2_ASM465v1_rm.out2822           -------------------------AAAA-AATATCACTCGTTG------
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           -------------------------------AGGTCACTCGCTGGTT---
GCA_000004655.2_ASM465v1_rm.out2853           -------------------------AAAA-AA-ATTCACTTGCC------
GCA_000004655.2_ASM465v1_rm.out2861           CC----CTCATCAAAACA--GGTGTCAAGAACCAATCCATAGTGGGTG-A
GCA_000004655.2_ASM465v1_rm.out2960           -------------------------------------------G------
GCA_000004655.2_ASM465v1_rm.out2961           --------------------------------AATCACTCGATGTC----
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           CC-----CTTGGTTAAAATA-------AGAAATGGCCTATGGTGGGTG-G
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           -----------------------------------ATGTCCATT------
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           -------------------------TAAA-AAGTTCACTCGCTGCCTCGC
GCA_000004655.2_ASM465v1_rm.out3461           -----------------------------------CACTCGATCAC----
GCA_000004655.2_ASM465v1_rm.out3530           CC----CT---CATAAAACACGTGTTAAGAATCGACATATGGAGGGCG-G
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           ---------------------TAGTTAAA-AAAGTCACTCGCTGA-----
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           -------------------------------AGGTCATTCACTGGCC---
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3988           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4037           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4038           --------------------------------GTTACTCGACCC-C----
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4141           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           ACTGGCCCCTTTAAAACA--CATGTTTAGAAT------------------
GCA_000004655.2_ASM465v1_rm.out4190           ------------------------------------------TG--T---
GCA_000004655.2_ASM465v1_rm.out4193           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           -------------------------------AAGTCACTTACTGGTT---
GCA_000004655.2_ASM465v1_rm.out4331           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           -------------------------------AGGTCACTCGTTGGTC---
GCA_000004655.2_ASM465v1_rm.out4537           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4544           -----------------------------------------GCTAG----
GCA_000004655.2_ASM465v1_rm.out4603           ----------------------------------TCACCCGTTGGTT---
GCA_000004655.2_ASM465v1_rm.out4680           CC----CTCGTAAAAACA--CATGTTAAGAAGCGACCTATGGAGGGCG-G
GCA_000004655.2_ASM465v1_rm.out4711           CC----TTTGTAAAAACA--CGTGTTAAGAATCGACCTATGGAGGGCG-G
GCA_000004655.2_ASM465v1_rm.out4856           -----------------------------------GGTCAAGCTGA----
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           CT----CTCGTAAAAACA--CATGTTATGAATCGACCTATGGAGAGCG-G
GCA_000004655.2_ASM465v1_rm.out5202           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5208           ------------------------------------------CCCAT---
GCA_000004655.2_ASM465v1_rm.out5228           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5229           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5245           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           ---------------------AGGTAAAA-AAGGTCACTCGCTAG-----
GCA_000004655.2_ASM465v1_rm.out5480           CC-----CTTGGTTTAAACACTTGTTAAGAAACGACCTATGGTGGGTG-G
GCA_000004655.2_ASM465v1_rm.out5492           ------------------------------------------TG--T---
GCA_000004655.2_ASM465v1_rm.out5541           ------------------------------------------TGAAC---
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           GC-------GTTTTAGGC--TAGATTAAA-ACGGTCATTTTGTGG-----
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5720           CC-----CTCGGTTAAAACACGTGTTAGAAAACAACCTGTGGGCAAGC-C
GCA_000004655.2_ASM465v1_rm.out5814           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5822           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5838           -----------------------------------GTCACTCGCTG----
GCA_000004655.2_ASM465v1_rm.out5849           -------------------------------AGTTCACGCGCTAACT---
GCA_000004655.2_ASM465v1_rm.out5859           CT----CTCATAAAAAAACACGTGTTAAGAATCAA--CCTAGAGGGTG-G
GCA_000004655.2_ASM465v1_rm.out5860           -----------------------------------GGTCTTATTGG----
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           -----------------------------------TCGGTCACTGG----
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6090           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6091           -----------------------------------TTACAAGCT------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           -------------------------------------TTATGGCC-----
GCA_000004655.2_ASM465v1_rm.out6211           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6243           AC----CTCATAGAAACA--CGTGTTAAGAATCAACCTATGAAGGACG-G
GCA_000004655.2_ASM465v1_rm.out6327           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6354           ------------------------------------------CG--T---
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           GA-------ATGTTAGGT--CTTTTTGAA-AAATTCACTCTCTAA-----
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           -------------------------------AGGTCACTCGCTGGTT---
GCA_000004655.2_ASM465v1_rm.out6526           -------------------------------AGGTCACTCGCTGGTT---
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           TC----CTCGTAAATGCA--CGTGTTAGGAAATGATATATGGAGAGCG-A
GCA_000004655.2_ASM465v1_rm.out7043           CC----CACATACAAACA--CATG-TTAAGATCAACCTACGGAGGGTA-A
GCA_000004655.2_ASM465v1_rm.out7044           CC----CACATACAAACA--CATG-TTAAGATCAACCTACGGAGGGTA-A
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           CC-----TTTGGTCAAAACATGAGTTGAGCAACGACCTACGGTAGATG-G
GCA_000004655.2_ASM465v1_rm.out7236           ------------------------------------------TG--T---
GCA_000004655.2_ASM465v1_rm.out7276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           -------------------------------AGGTCACTCACTAGTT---
GCA_000004655.2_ASM465v1_rm.out7378           -------------------------------AGGTCACTTGTTGGTT---
GCA_000004655.2_ASM465v1_rm.out7392           -------------------------------AGGTCACTCGCTGGTT---
GCA_000004655.2_ASM465v1_rm.out7396           -------CTCTTATAAAACATGTGTTAAGAATTGATCTATAGATGACG-G
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           -------------------------------AGTTTACTCGTTGGCC---
GCA_000004655.2_ASM465v1_rm.out7414           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           -----------------------------------CTCCTCGTTTG----
GCA_000004655.2_ASM465v1_rm.out7660           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     -------------------------------ATTTTACAAGCTAGTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   -----------------------------------CATTCATTGGT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   -----------------------------------GGTCTTATTGG----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   CC----CTTATAAAAACA--TGTATTAAGAATCGACCTATGGAAGGCG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   CT----CTCATAAAAACA--CGTGTTAAG---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   -------------------------------AAGTCACTTACTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   CC----CTCATAAAAAC---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   CC----CTCGTAAAAACA--TGTGTTAAGAATCGACCTATGGAGGGCA-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   -------------------------------AGGTCACTCGATGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   CC----TTTGTAAAAACA--CGTGTTAAGAATCGACCTATGGAGGGCA-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   -------------------------------AGGTCACTCGCTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  GA-------ATGTTAGGT--CTTTTTGAA-AAATTCACTCTCTAA-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  -------------------------------AGGTCACTCGCTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  CC----ATCGTAAAAACA--CATGTTAAGAATTGATGTATGAAGGATG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  -----------------------------------TACTCGCTAAC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  CC----CACATACAAACA--CATG-TTAAGATCAACCTACGGAGGGTA-A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  TC----CTCGTAAATGCA--CGTGTTAGGAAATGATATATGGAGAGCG-A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  CC-----CTTGGTCAAAACATGAGTTAAGCAACGACCTATGGTAGATG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  ---------------------AAGTT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  CC----CT---CATAAAACACGTGTTAAGAATCGACATATGGAGGGCG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  -------------------------------AGGTCACTTGTTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  -------------------------------AGGTCACTCGCTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  -------CTCTTATAAAACATGTGTTAAAAATTGATCTATAGATGACG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  ------------------------------------------TG--T---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  -------------------------------TGATCACTCACTCATC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  -------------------------------AGATTACTCATTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  ---------------------AGGTAAAA-AAGGTCACTCGCTAG-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  -------------------------------AAATCACTTGCTAACC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  ----------------------------------TCTTTTTTTAAAGG-A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  ---------------------------GA-AAAGACCACTCGTTTCC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  ------------------------------------------TG--T---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  CC----CTCACAAAAACC--CGTATTAAGAATCAACCTACG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  CC----CTCATAAAAACA--CATGTT------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  CT----CTCATAGAAACA--TGTAAGAA----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  CT----CTCATAAAAATA--TGTATTAATAATTGAC-TATGGAGGATG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  -------------------------------AGGTCACTTGTTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  ---------ATTTTAGGT--TCTCTTGTA-GGA-----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  -------------------------------ATCTCTCTCTCTGATC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  -----------------------------------TCACTTGTAGA----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  --------------------------------GGTCATTCGCTGGC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  -------------------------AAAA-AATGTCACTCGTTG------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  -------------------------AAAA-AA-ATTCACTCGCC------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  CC----CTCATCAAAACA--GGTGTCAAGAACCAATCCATAGTGGGTG-A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  -------------------------------------------G------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  --------------------------------AATCACTCGATGTC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  C-----CTCGTAAA--AAAATGTGTTAAGAATTGACCTATTAAGGGTG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  CC-----CTTGGTTAAAACACGTGTTAAGAAATGGCCTATGGTGGGTG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  -----------------------------------ATGTCCATTGA----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  ---------------------------AA-AAGTTCACTCGCTGCCT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  -------------------------------AGTTTACTCGTTGGCC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  -----------------------------------CACTCGATCAC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  ---------------------TAGTTAAA-AAAGTTACTCGCTGA-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  -----------------------------------GTCACTCACGG----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  ACTGGCCCCTTTAAAACA--CATGTTTAGAAT------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  ------------------------------------------TG--T---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  ------------------------------------------T--GT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  -------------------------------AGGTCACTCGTTGGTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  CC----CTCGTAAAAACA--CATGTTAAGAAGCGACCTATGGAGGGCG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  ---------------------GGGTTA-----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  CT----CTCGTAAAAACA--CATGTTATGAATCGACCTATGGAGAGTG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  ------------------------------------------CCCAT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  CC-----CTTGGTTTAAACACTTGTTAAGAAACGACCTATGGTGGGTG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  ------------------------------------------TG--T---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  ----------------------------------------------C---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  -------------------------------------TTATGGCC-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  GC-------GTTTTAGGC--TAGATTAAA-ACGGTCATTTTGTGG-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  CC-----CTCGGTTAAAACACGTGTTAGAAAACAACCTGTGGGCAAGC-C
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  -----------------------------------GTCACTCGCTG----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  -------------------------------AGTTCACGCGCTAACT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  CT----CTCATAAAAAAACACGTGTTAAGAATCAA--CCTAGAGGGTG-G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  -----------------------------------TCGGTCACTGG----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  CT-----CAAAGTCAAAACACGTGTTAAGAAACAACCTATGGTAGTGA-A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  ---------------------------------GTCACTCGCTGGTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  -----------------------------------TTACAAGCT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  AC----CTCATAGAAACA--CGTGTTAAGAATCAACCTATGAAGGACG-G

GCA_000004655.2_ASM465v1_rm.out126            ---TT---CCCA---------------------------------AGAA-
GCA_000004655.2_ASM465v1_rm.out180            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            GCCCTCGTGTAGGGGACAGG------------------------------
GCA_000004655.2_ASM465v1_rm.out373            ---GT---TCCA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out391            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out395            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out396            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            -CCCTCGTAAAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out884            ---CC-CTA-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out910            ---CT-ACC-------------------------------------AAA-
GCA_000004655.2_ASM465v1_rm.out1025           -CCCACGCCAAA---------------------------------GCA--
GCA_000004655.2_ASM465v1_rm.out1172           ---CCCTTGTTT---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out1226           -C-CTTGGAT-----------------------------------CAAAA
GCA_000004655.2_ASM465v1_rm.out1247           ---CC-CCC-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           -------TTATA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out1437           -C-TA--TA-------------------------------------TAAA
GCA_000004655.2_ASM465v1_rm.out1649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1679           -----GCCCCTC---------------------------------ATAAA
GCA_000004655.2_ASM465v1_rm.out1680           -CC-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           GCTCTCGAATTT---------------CAGGCCTGGTTAAAAAAGG----
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           -CCCTTGTTTAA---------------------------------AAC--
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2082           -CCCTGGTATAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out2084           -CCCTGGTATAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out2085           -CCCTGGTATAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out2090           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2178           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2191           ----TCCC------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           GCCCTCATGTAGGGTGCAGGGGCCTC------------------------
GCA_000004655.2_ASM465v1_rm.out2246           GCCCTCGTATAGGGGACAAG------------------------------
GCA_000004655.2_ASM465v1_rm.out2310           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2311           ACCCTTGTGTAGAGG-TAGAGGTCACAAAGCATGGGTT------------
GCA_000004655.2_ASM465v1_rm.out2315           ACCCTTGTGTAGGGA-TAGAGGTCACAAAGCATGGGTT------------
GCA_000004655.2_ASM465v1_rm.out2388           -CCCTCGTAAAA---------------------------------AT---
GCA_000004655.2_ASM465v1_rm.out2430           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2502           -C-CTCTACTTG---------------------------------GCATG
GCA_000004655.2_ASM465v1_rm.out2507           ----------------------------------------------A---
GCA_000004655.2_ASM465v1_rm.out2649           ---CTCCTAGTA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out2658           --ACCTCTTAGT---------------------------------TAAAA
GCA_000004655.2_ASM465v1_rm.out2710           -C------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           -C-CACATA-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out2793           ----CCCT------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2794           ----CCCTTGAA---------------------------------CCGAC
GCA_000004655.2_ASM465v1_rm.out2822           ---CCCCCTTGT---------------------------------CAAAA
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           -T-CCCTGGTCG---------------------------------GCATG
GCA_000004655.2_ASM465v1_rm.out2853           ---GATCCTTAT---------------------------------AAAAA
GCA_000004655.2_ASM465v1_rm.out2861           CTCCACATGTGGGGAGCAGAGC----------------------------
GCA_000004655.2_ASM465v1_rm.out2960           ---CCCCTTGGT---------------------------------TAGAA
GCA_000004655.2_ASM465v1_rm.out2961           ----CCCTTGGT---------------------------------TATAC
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           GCCCTTGTGTTTGT------------------------------------
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           -----GATAAAA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           TGGTCTCTTGAT---------------------------------TAAAA
GCA_000004655.2_ASM465v1_rm.out3461           ---CCCTTTGTC---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out3530           GTCCTCGTGTAGGGGGCAGG------------------------------
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           -CCCTTGTAAAG---------------------------------A----
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           -C-CTTGATCGA---------------------------------AATAT
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3988           -----------T---------------------------------AAAAA
GCA_000004655.2_ASM465v1_rm.out4037           ----T---CCTA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out4038           -------TTGGT---------------------------------TGAAA
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4141           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4190           -CCTACACCGAA---------------------------------GCA--
GCA_000004655.2_ASM465v1_rm.out4193           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           ---CCCATC-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out4331           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           -C-CTTTGTC------------------------------------AAAC
GCA_000004655.2_ASM465v1_rm.out4537           -----------A---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out4544           ---CCCCTTATA---------------------------------AAAT-
GCA_000004655.2_ASM465v1_rm.out4603           -C-CCTTAGTCG---------------------------------ACATG
GCA_000004655.2_ASM465v1_rm.out4680           AGCCTCGTTAGGGGGCAAG-------------------------------
GCA_000004655.2_ASM465v1_rm.out4711           ACCCTCGTGTAGGAGGTAGGGGTCTTGAAGCACGGGTTAAGGACTGTTTT
GCA_000004655.2_ASM465v1_rm.out4856           ---GCCCTCATC---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           GCCTTGTGTA----------------------------------------
GCA_000004655.2_ASM465v1_rm.out5202           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5208           -GCCAAATTAAA---------------------------------GCA--
GCA_000004655.2_ASM465v1_rm.out5228           -CCCTCGTAAAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out5229           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5245           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           GCCCTCGTGCATGG------------------------------------
GCA_000004655.2_ASM465v1_rm.out5492           -CCCACGCCAAA---------------------------------GCA--
GCA_000004655.2_ASM465v1_rm.out5541           -C-CTCATA-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           -CCCTTTTATAA---------------------------------AATCA
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5720           CTC---------GT------------------------------------
GCA_000004655.2_ASM465v1_rm.out5814           --------A-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out5822           -CTCCCGTAAAA---------------------------------AT---
GCA_000004655.2_ASM465v1_rm.out5838           ---GTTCCCCGA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out5849           -T-CGCACA-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out5859           TCCCTCGTCTAGGAGGCAGG------------------------------
GCA_000004655.2_ASM465v1_rm.out5860           ---ACACTTATA---------------------------------AAAC-
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           ---TCCCTTATA---------------------------------AAAA-
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           -CTCTCGTAAAA---------------------------------TT---
GCA_000004655.2_ASM465v1_rm.out6090           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6091           ----TACCCGTA---------------------------------AAAG-
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           -CTTTGGTTAAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out6211           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6243           GCCCTCGTGTAG--------------------------------------
GCA_000004655.2_ASM465v1_rm.out6327           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6354           -TTGTCCC------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           -CCTCTCATAAA---------------------------------AC---
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           -C-CCCTGGTTG---------------------------------GCATG
GCA_000004655.2_ASM465v1_rm.out6526           -C-CCCTGGTTG---------------------------------GCATG
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           -CAGTAGTAAAA---------------------------------AT---
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           GCTCTCGTGTAGGGGACAGGA-----------------------------
GCA_000004655.2_ASM465v1_rm.out7043           GCCCTCGTGTAGGGGGCACAGAACT-------------------------
GCA_000004655.2_ASM465v1_rm.out7044           GCCCTCGTGTAGGGGGCACAGAACT-------------------------
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           GCCTCGAAGCACGG------------------------------------
GCA_000004655.2_ASM465v1_rm.out7236           -CCCACGCCAAA---------------------------------GCA--
GCA_000004655.2_ASM465v1_rm.out7276           -CCCTCA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           -C-CCAAACAAC---------------------------------ATAGG
GCA_000004655.2_ASM465v1_rm.out7378           ---CC-CCC-------------------------------------AAA-
GCA_000004655.2_ASM465v1_rm.out7392           ---CC-CCC-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out7396           ACCCTTATGTTAC-------------------------------------
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           -C-CTCGTA-------------------------------------AAAA
GCA_000004655.2_ASM465v1_rm.out7414           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           ---TCCCACCCC---------------------------------AAAGC
GCA_000004655.2_ASM465v1_rm.out7660           ----------------------------------------------CATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     -C-CTTGTA-------------------------------------AAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   ---TT---CCCA---------------------------------AGAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   ---ACACTTATA---------------------------------AAAC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   GCCCTCGTGTAGGGGACAGG------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   ---CCCATC-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   ACCCTCGTGTAGGAGGCAGAGGCCTCAAAGCACAG---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   ---CC-CTA-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   ACCCTCGTGGAGGAGGTAGGGGTCTTGAAGCACGGGTTAAGGACTGTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   ---CT-ACC-------------------------------------AAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  -CCTCTCATAAA---------------------------------AC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  -C-CCCTGGTTG---------------------------------GCATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  GCCCTCATGTAGGGTGCAGGGGCCTC------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  ---CCCTTGTTT---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  GCCCTCGTGTAGGGGGCACAGAACT-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  GCTCTCGTGTAGGGGACAGGA-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  GCCTCGAAGCACGG------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  ----------------------------------------------CATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  ----T---CCTA---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  -CCCTCA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  GTCCTCGTGTAGGGGGCAGG------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  ---CC-CCC-------------------------------------AAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  ---CC-CCC-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  ACCCTTATGTTAC-------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  -CCCTCATCAAA---------------------------------AC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  -CCCACGCCAAA---------------------------------GCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  -C-CTTGGAT-----------------------------------CAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  ---CC-CCC-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  ------TTATAA---------------------------------AAAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  -C-TA--TA-------------------------------------TAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  GCTCTCGAATTT---------------CAGGCCTGGTTAAAAAAGG----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  -CCCTTGTTTAA---------------------------------AAC--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  -CCCACGCCAAA---------------------------------GCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  -CCCTGGTATAA---------------------------------AC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  ----TCCC------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  ACCTTTGTGTAGGGG-TAGAGG----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  -CCCTCGTAAAA---------------------------------AT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  -C-CTCTAATTG---------------------------------GCATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  ----------------------------------------------A---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  ---------------------------------------------ACATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  -C------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  -C-CACATA-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  ---CTCCTAGTA---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  ----CCCTTGAA---------------------------------CCGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  ---CCCCCTTGT---------------------------------CAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  ---GATCCTTAT---------------------------------AAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  CTCCACGTGTGGGGAGCAGAGC----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  ---CCCCTTGGT---------------------------------TAGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  ----CCCTTGGT---------------------------------TATAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  GCCCTCGTATAGGGGACAAG------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  GCCCTTGTGTTTGT------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  -CAGTAGTAAAA---------------------------------AT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  ---TAAAAAAAA---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  -C------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  -C-CTCGTA-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  ---CCCTTTGTC---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  -CCCTTGTAAAG---------------------------------A----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  ---GT---TCCA---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  -----------T---------------------------------AAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  -CC-----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  ---GCCCCTCAT---------------------------------AAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  -CCTACACCAAA---------------------------------GCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  -CCCACGCAAAA---------------------------------GCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  -C-CTTTGTC------------------------------------AAAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  AGCCTCGTTAGGGGGCAAG-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  GCCTTGTGTA----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  -GCCAAATTAAA---------------------------------GCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  -CCCTCGTAAAA---------------------------------AC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  GCCCTCGTGTATGG------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  -CCCACGCCAAA---------------------------------GCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  -C-CTCATA-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  -CTTTGGTTAAA---------------------------------AC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  -CCCTTTTATAA---------------------------------AATCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  CTC---------GT------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------A-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  -CTCCCGTAAAA---------------------------------AT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  ---GTTCCCCGA---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  -T-CGCACA-------------------------------------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  TCCCTCGTCTAGGAGGCAGG------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  ---TCCCTTATA---------------------------------AAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  CCCTT-------GT------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  -CTCTCGTAAAA---------------------------------TT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  -T-CCCTGGTCG---------------------------------GCATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  ----TACCCGTA---------------------------------AAAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  GCCCTCGTGTAG--------------------------------------

GCA_000004655.2_ASM465v1_rm.out126            TATGGGTTAAGAATCACCCTATGGAGAG-------CAAAC--AC-TCGTG
GCA_000004655.2_ASM465v1_rm.out180            ---------AAAAATGACTTATAATAAA-------CAAACCCTCGTGTAT
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out373            CATGGATTAAGAATCAACCTATAAAGAA-------CGTGC--TC-TCGTG
GCA_000004655.2_ASM465v1_rm.out391            ---------------AATTGACCTATGG-------CGGGCCCTCATATAG
GCA_000004655.2_ASM465v1_rm.out395            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out396            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            ------------------------------------------TC-GTGTA
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            ----------------------------------------GTGTTAAGAA
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            -ATGTGTTAAGAATCGACCTATGGAGGG-------CAGGCCCTCGT-GTA
GCA_000004655.2_ASM465v1_rm.out884            CATGGATTAAGAATTGACCTACAGAAG-------GTGGGCCCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out910            ACAAGGTT--------AGGAATTGATC-------TATCGTCCTT-GTGTA
GCA_000004655.2_ASM465v1_rm.out1025           TAGGTC-TAAGGACCAGCCTAT----------------------------
GCA_000004655.2_ASM465v1_rm.out1172           CACGTGTTAAGAAATGACTTATAATTAC-------GAACC--AT-CGTGT
GCA_000004655.2_ASM465v1_rm.out1226           CAAATGTTAAAAACTGACCTATGGTAAG-------TCGGCAGTC-ATACA
GCA_000004655.2_ASM465v1_rm.out1247           CATGGGTTAAGAATCGACCTATGGAG--------------------GGTG
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           TATGGGTTAATAATCAACCAACAAGGAC-------GAGCC--AT-CATAT
GCA_000004655.2_ASM465v1_rm.out1437           TACTTATTAAGAATTAATCAATGGAGAA-------CAGATCCTC-ATGCA
GCA_000004655.2_ASM465v1_rm.out1649           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1679           AATGTGTTAAGAATCAACCTATGGAGC--------GTGGGCCTC-GTATA
GCA_000004655.2_ASM465v1_rm.out1680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           -------TCACTT---TTTGGCTCCTCG-------TAAAAACACGTGTAG
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           -ATGGGAAGCAAATATG---------------------------------
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           ---------------------------------------GTAGT-GGGCT
GCA_000004655.2_ASM465v1_rm.out2082           -ATGTGTGCCTATAGAGGG-------------------------------
GCA_000004655.2_ASM465v1_rm.out2084           -ATGTGTGCCTATAGAGGG-------------------------------
GCA_000004655.2_ASM465v1_rm.out2085           -ATGTGTGCCTATAGAGGG-------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           ------------------------AAGG-------CAGGCCCTCATGTAG
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           --------AAGAATCTACCTACGGAGGA-------AGGGCCCTA-GTGTA
GCA_000004655.2_ASM465v1_rm.out2178           --------AAGAATCTACCTACGGAGGA-------AGGGCCCTAGTGTAG
GCA_000004655.2_ASM465v1_rm.out2191           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2246           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2310           --------------ATTACTATAGAGGA-------CGGACCCTTGTGTAG
GCA_000004655.2_ASM465v1_rm.out2311           -----------------------AATAA-------CTGATCCTTGT--GT
GCA_000004655.2_ASM465v1_rm.out2315           -----------------------AATA-----------------------
GCA_000004655.2_ASM465v1_rm.out2388           -ATGTGTTAAGAATCGACCTATGAAGGG-------CAGGCCCTCGT-GTA
GCA_000004655.2_ASM465v1_rm.out2430           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2502           -------TGTGAACCGACATATGATGGGCAGGACCTCGTATATG-GGGCA
GCA_000004655.2_ASM465v1_rm.out2507           -GGAGGGGGACAATCGATCTAGTAG-------------GCCCTCGT-ATA
GCA_000004655.2_ASM465v1_rm.out2649           CGTGTATTAAGAATGGGCCCATCATCTA-------AAAG-----------
GCA_000004655.2_ASM465v1_rm.out2658           CAAGTGT-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2710           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           CATGTGTTAAGATTCGACCTATATAGG-------GTGAGTCCTC-GTGTT
GCA_000004655.2_ASM465v1_rm.out2793           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2794           CTACAAATAGT-GGGCGGCCATTGTGTA-------CG--------TGAT-
GCA_000004655.2_ASM465v1_rm.out2822           CACGTGTTAAGAATTAACCTAAGGAGGA-------CGGGCCCTT-GGGTA
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           -------TGTGAACCGACCTGTGGTGGCGT----AGCGGGCCCT-CGTGT
GCA_000004655.2_ASM465v1_rm.out2853           TACGTGTCAAAATTTGACCCATAGAGGA-------TGGGCCCTC-ATGTA
GCA_000004655.2_ASM465v1_rm.out2861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2960           GACGTGTTAAGAAATGACCTATGGTGAG-------CAGACCCTT-GTGTA
GCA_000004655.2_ASM465v1_rm.out2961           ACACGTTAAGA-AATGACCTATGGTGCC-------CC--------TCGTG
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           -----------------------------------------------GTA
GCA_000004655.2_ASM465v1_rm.out3207           ------------ATCGACCTATAGAGAC-------AGGTC--CTTGGTTA
GCA_000004655.2_ASM465v1_rm.out3276           CTTGTGTTAAGAAATGACCTATGGTGAA-------CAACATCAT-ATATG
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           ATTGTGTTAAA-AA------------------------------------
GCA_000004655.2_ASM465v1_rm.out3461           CTCTAAACATGTGT---------------------GAAGT--TG-ATGGG
GCA_000004655.2_ASM465v1_rm.out3530           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           --CAAGTTAAGAATCGACCTATGGAGGG-------TGGGCCCCTTGTGTA
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           GTGTTAAGAATGACCTATATATGGTGG--------ATGGCCATC-GTATA
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3988           CATGTGTTAAGAAACGACCTATGGTGGG-------CGGGCCCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out4037           CATGAGTTAAGAATCACCCTATTAAGGA-------TGGGC--CT-TCTTA
GCA_000004655.2_ASM465v1_rm.out4038           CACATATTAAC-AAAATGACTTATGCTA-------GG--------AGGTG
GCA_000004655.2_ASM465v1_rm.out4039           ---GTGTCAAGATACTATCTATGTTGGG-------CGGGTTCTC-ATGTA
GCA_000004655.2_ASM465v1_rm.out4041           ---------------------------------------GGCCC-TTGTG
GCA_000004655.2_ASM465v1_rm.out4043           ---------------------------------------GGCCC-TTGTG
GCA_000004655.2_ASM465v1_rm.out4141           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           -------------------------------------------TGACCTA
GCA_000004655.2_ASM465v1_rm.out4190           CAGGTC-TAAG---------------------------------------
GCA_000004655.2_ASM465v1_rm.out4193           --------------CCAC--------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           TAT-----------------------G-------GGTCAAAAAT-GTGTG
GCA_000004655.2_ASM465v1_rm.out4331           -------------------TATGG-GAG-------TGAGC--CCTCGTGT
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           CGCGTGTTATAAAATGACCAATGGTGG-------AAGAGTCTTG-GTACA
GCA_000004655.2_ASM465v1_rm.out4537           CATGGGCTAAAAGTCGACATATATGTAT-----------------GTATG
GCA_000004655.2_ASM465v1_rm.out4544           TACATGCTAAGAATCGATATATGAAGGA-------CACGTTCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out4603           -------TATGAATCGACCTATGGTGG--------GCGGGACCT-CATGT
GCA_000004655.2_ASM465v1_rm.out4680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4711           TACGCGTTAAGAATCGATCTACGGAGGG-------CGGACCCTCGTGTAG
GCA_000004655.2_ASM465v1_rm.out4856           CACGTGTTAAGAATCCATCT------------------------------
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5202           ----------------------TAAAAA-------CAAGTCACTCGTTGG
GCA_000004655.2_ASM465v1_rm.out5208           TAGGTC-TAAGGCTCGACCTAGGGTAAG---------GGTGGG-------
GCA_000004655.2_ASM465v1_rm.out5228           -GTGT--TAAGAATCGACTTATGGAGGG-------TGGGCCCTCGT-G--
GCA_000004655.2_ASM465v1_rm.out5229           ---------------------------------------CCCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out5245           ----------------------------------------------TGTA
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           -----------------------------------------------G--
GCA_000004655.2_ASM465v1_rm.out5492           CAGGTC-TAAGGCCTGGCCCAGGTCGTT---------GGTTGTTCTCACA
GCA_000004655.2_ASM465v1_rm.out5541           GACGTGTTAAGAATCGAACTATGAAGA-------ATAGGTCCTT-GCGTA
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           GGCATGTTAAGAATCGATGAATAATGGG-------TGAGTCCTCGT-GTG
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------AGGTCCGCCCCT-ACGTG
GCA_000004655.2_ASM465v1_rm.out5720           -----------------------------------------------GTA
GCA_000004655.2_ASM465v1_rm.out5814           CATGGGTTAAGAATCAACCTATGG--------------------------
GCA_000004655.2_ASM465v1_rm.out5822           -ATATGTTAAGAATCGATCTATGGGTAG-------GTTCTTGTTCT-ATG
GCA_000004655.2_ASM465v1_rm.out5838           CATGGTTTAAGAATGGAGGGT-----------------------------
GCA_000004655.2_ASM465v1_rm.out5849           CATGTGTTAAAAATCGACATATGATAGA-------CA--TACCC-TCGTG
GCA_000004655.2_ASM465v1_rm.out5859           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5860           CATGCGTTAAGAATTGACCTAT----------------------------
GCA_000004655.2_ASM465v1_rm.out5861           ------------------------AGA-------ACATGTCCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out5885           CACGTGTTAAGAATTGACCTGTTGAGGA-------TGAGCTCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           -GCGTGTTAAAAATCTACCTATGGAGGA-------TAGGCTCTCGT-GTA
GCA_000004655.2_ASM465v1_rm.out6090           -ACTTGCTAAGAAACTTTCTATGGTGGC-------CGGATCCTT-ATGTA
GCA_000004655.2_ASM465v1_rm.out6091           CATATGTTAAA---CAACCTATGGTAAA-------CGGATCCTC-GTGTA
GCA_000004655.2_ASM465v1_rm.out6198           -------TAAGGCTCGAATTATAGAGGA-------CGGATCCAC-ATGTT
GCA_000004655.2_ASM465v1_rm.out6199           ------TTAAGAAATGATCTATGGTGGACAGGCCCTCATGTAC----GGG
GCA_000004655.2_ASM465v1_rm.out6200           -ATGTGTTAAGAAACGGACTTATGATGA------ATATGTTCTTGA-GTA
GCA_000004655.2_ASM465v1_rm.out6211           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6243           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6327           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6354           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           -------------------------------------------------T
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           -------------------------------------------------T
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           -ATGTGTTAAAAATCAATCTATGAA-------------------------
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           -------TGTGAACTGACCTGTGGTGG--------GCGGGCCCT-CGTGT
GCA_000004655.2_ASM465v1_rm.out6526           -------TGTGAACTGACCTGTGGTGG--------GCGGGCCCT-CGTGT
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           -ATGTGTTAAGAATCCTCCTATGAAGGA-------TGCCCCACGGA-CTA
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7044           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           -----------------------------------------------GTT
GCA_000004655.2_ASM465v1_rm.out7236           TAGGTC-TAAGAATC-----------------------------------
GCA_000004655.2_ASM465v1_rm.out7276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           TTAAGATTAAGAATCGACCTATGGAGG-------GTGAGCCCTC-AGGTA
GCA_000004655.2_ASM465v1_rm.out7378           AACATGGGTAGAATCGCCAAATGGAAG-------GCGTGCCCTC-GTGTG
GCA_000004655.2_ASM465v1_rm.out7392           AACATGGGT----------------TA-------AGAAGAATCG-ACCTA
GCA_000004655.2_ASM465v1_rm.out7396           ------------------------------------------------GT
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           CACAGGGTAAAAATCTATCGAGGACG----------TGACCCTC-GTGTG
GCA_000004655.2_ASM465v1_rm.out7414           ------------------CTATGGTGG-------ACTTTCCCTT-ATGTA
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           AAAGGTCTAAGGCCTGACCCAGGT-CAT-------TAGTCGTTCTCGCAT
GCA_000004655.2_ASM465v1_rm.out7660           -------TGTGAACCAACCTGTGGTGG--------GCAAGCCCT-CGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     TACATGTTAAGAATCGATATACGAAGG--------ACCTATTCT-CGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   TATGGGTTAAGAATCACCCTATGGAGAG-------CAAAC--AC-TCGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   CATGCGTTAAGAATCGACCTAT----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   ------------------------AGA-------ACATGTCCTC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------AAAAAACGACTTATAATAAA-------CAAACCCTCGTGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   ---------------AATTGACCTATGG-------CGGGCCCTCATATAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   ------------------------------------------TC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   TATGGGTTAAGAATCGACCTATGAAAA-------GCGGACCCTC-ATGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   ----------------------------------------GTGTTAAGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   CATGGATTAAGAATTGACCTACAGAAG-------GTGGGCCTTC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   TACGCGTTAAGAATCGATCTACGGAGGG-------CGGACCCTCGTGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   ACAAGGTT--------AGGAATTGATC-------TATCGTCCTT-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   -------------------------------------------------T
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  -ATGTGTTAAAAATCAATCTATGAA-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  -------TGTGGACTGACCTGTGGTGG--------GCGGGCCCT-TGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  CACGTGTTAAGAAATGACTTATAATTAC-------GAACC--AT-CGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  -----------------------------------------------GTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  -------TGTGAACCAACCTGTGGTGG--------GCAAGCCCT-CGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  CATGAGTTAAGAATCACCCTATTAAGGA-------TGGGC--CT-TCTTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  AACATGGGTAGAATCGCCAAATGGAAG-------GCGTGCCCTC-GTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  AACATGGGT----------------TA-------AGAAGAATCG-ACCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  ------------------------------------------------GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  -ACGTGTTAAGAATCCATCT------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  TAGGTC-TACGGACCAGCCTAT----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  CAAATGTTAAAAACTGACCTATGGTAAG-------TCGGCAGTC-ATACA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  CATGGGTTAAGAATCGACCTATGGAG--------------------GGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  ATGGGGTTAATAATCAACCAACAAGGAC-------GAGCC--AT-CATAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  TACTTATTAAGAATTAATCAATGGAGAA-------CAGATCCTC-ATGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  -------TCACTT---TTTGGCTCCTCG-------TAAAAACACGTGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  -ATGGGAAGCAAATATG---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  TAGGTC-TAAGGCCTGACCCA-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  ---------------------------------------GTAGT-GGGCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  -ATGTGTGCCTATGGAGGG-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  ------------------------AAGG-------CAGGCCCTCATGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  --------AAGAATCTACCTACGGAGGA-------AGGGCCCTAGTGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  --------------ATTACTATAGAGGA-------CGGACCCTTGTGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  -ATGTGTTAAGAATCGACCTATGAAGGG-------CAGGCCCTCGT-GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  -------TGTGAACCGACATATGATGGGCAGGACCTCGTGTATG-GGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  -GGAGGGGGACAATCGATCTAGTAG-------------GCCCTCGT-ATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  ---------AGT--------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  -------TATGAATCGACCTATGGTGG--------GCGGGACCT-CATGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  CATGTGTTAAGATTCGACCTATATAGG-------GTGAGTCCTC-GTGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  CGTGTATTAAGAATGGGCCCATCATCTG-------AAAG-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  CTACAAATAGT-GGGCGGCCATTGTGTA-------CG--------TGAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  CACGTGTTAAGAATCAACCTAAGGAGGA-------CGGGCCCTT-GGGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  TACGTGTCAAAATTTGACCTATAGAGGA-------TGGGCCCTC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  GACGTGTTAAGAAATGACCTATGGTGAG-------CAGACCCTT-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  ACACGTTAAGA-AATGACCTATGGTGCC-------CC--------TCGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  -----------------------------------------------GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  -ATGTGTTAAGAATCCTCCTATGAAGGA-------TGCCCCACGGA-CTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  CTTGTGTTAAGAAATGACCTATGGTGAA-------CAACATCAT-ATATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  CACAGGGTAAAAATCTATCGAGGACG----------TGACCCTC-GTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  CTCTAAACATGTGT---------------------GAAGT--TG-ATGGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  --CAAGTTAAGAATCGACCTATGGAGGG-------TGGGCCCCTTGTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  CATGGATTAAGAATCGACCTATAAAGAA-------CGTGC--TC-TCGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  CATGTGTTAAGAAACGACCTATGGTGGG-------CGGGCCCTC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  TATGTGTTAAGAATCAACCTATGGAGC--------GTGGGCCTC-GTATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  -------------------------------------------TGACCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  CAGGTC-TAAG---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  -------------------TATGG-GAG-------TGAGC--CCTCGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  CATATC-TAAGGCCCGACACATG---------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  CGCGTGTTATAAAATGACCAATGGTGG-------AAGAGTCTTG-GTACA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  ---------------------------------------------GTATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  ----------------------TAAAAA-------CAAGTCACTCGTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  TAGGTC-TAAGGCTCGACCTAGGGTAAG---------GGTGGG-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  -GTGT--TAAGAATCGACTTATGGAGGG-------TGGGCCCTCGT-G--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  ---------------------------------------CCCTC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  ----------------------------------------------TGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  -----------------------------------------------G--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  CAGGTC-TAAGGCCTGGCCCAGGTCGTT---------GGTTGTTCTCACA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  ------------------CTATGGTGG-------ACTTTCCCTT-ATGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  GACGTGTTAAGAATCGAACTATGAAGA-------ATAGGTCCTT-GCGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  -ATGTGTTAAGAAACGGACTTATGATGA------ATATGTTCTTGA-GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  ------TTAAGAAATGATCTATGGTGGACAGGCCCTCATGTAC----GGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  -----GCTAAGGCTCGAATTATAGAGGA-------CGGATCCAC-ATGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  GGCGTGTTAAGAATCGATGAATAATGGG-------TGAGTCCTCGT-GTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------AGGTCCGCCCCT-ACGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  -----------------------------------------------GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  CATGGGTTAAGAATCAACCTATGG--------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  -ATATGTTAAGAATCGATCTATGGGTAG-------GTTCTTGTTCT-ATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  CATGGTTTAAGAATGGAGGGT-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  CATGTGTTAAAAATCGACATATGATAGA-------CA--TACCC-TCGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  CACGTGTTAAGAATTGACCTGTTGAGGA-------TGAGCTCTC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  -----------------------------------------------GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  -GCGTGTTAAAAATCTACCTATGGAGGA-------TAGGCTCTCGT-GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  -------TGTGAACCGACCTGTGGTGGCGT----AGCGGGCCCT-CGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  -ACTTGCTAAGAAACTTTCTATGGTGGC-------CGGATCCTT-ATGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  CATATGTTAAA---CAACCTATGGTAAA-------CGGATCCCC-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  --------------------------------------------------

GCA_000004655.2_ASM465v1_rm.out126            TATAGGATA-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out180            ATAGAGAGAGACCTCAAAGCATGGGTCAGTCTCTAAACC-ATATATAAGA
GCA_000004655.2_ASM465v1_rm.out328            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out372            ---------GGCCTCAAAACACGGGCTAAGGACCAATCC-ATAGGGGGCC
GCA_000004655.2_ASM465v1_rm.out373            TAAGGGTAGGGTCTCAAAACATGGGTTAAGACCTAATCC-AAAGAGTCGG
GCA_000004655.2_ASM465v1_rm.out391            GG-AGCAGGGGCCTCAAAGCACAGGTTACGGACTGATCC-ATAGGGGGTG
GCA_000004655.2_ASM465v1_rm.out395            ---TGGTCCCTCGTAAAAACATGGGTTATGGACCGATCT-ATAGGGGACG
GCA_000004655.2_ASM465v1_rm.out396            ---TGGTCCCTCGTAAAAACATAGGTTATGGACCGATCT-ATAGGGGACG
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            TGGGGCAGGGGCCTCAAAGCACAGGTTAAGGCCTGATCC-ATAAGGGGCA
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            TTGACCTATGGAGGACGAGCATGGGTTAAGGACCAATCC-ATAGGGAGCG
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            GGAGGC--AGA--------------GGCCTCAAAGCACG-GG--------
GCA_000004655.2_ASM465v1_rm.out884            TGGGGCAGTGGCCTCAAAGCACGGGTTAAGACCCAACCC-ATAGGGGGCT
GCA_000004655.2_ASM465v1_rm.out910            GGGGGCAAGAGCCTCAAAGCATGGATTAAGGCCTGATCC-ATAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out1025           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1172           ACGAGTAAGTGCCTCAAATCAAGGGTTAAAGCCTAAATC-ATGGGGTGGA
GCA_000004655.2_ASM465v1_rm.out1226           CAAGGCAATGGTCTCAAAACACATGTTAAGGCCCAAACC-GTGAGGGCGG
GCA_000004655.2_ASM465v1_rm.out1247           GGCCCTATGGGCCTCAAATCACGGGTTAAGGCCTGATCT-GTAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           ATAGGGCATGGCTTCAAAGCACATGTTAACATCTGATAC-GTAAGAGGC-
GCA_000004655.2_ASM465v1_rm.out1437           GTGGACAG-----TGGTATC----------------------AAAGAACC
GCA_000004655.2_ASM465v1_rm.out1649           -------------TCAAAGCACACGTTAAGAATCAATCC-ATGGG---GG
GCA_000004655.2_ASM465v1_rm.out1679           GGAAGCATGGGCCTCAAAGAATGAGTTAAGGAACGATCC-ATATGAATGA
GCA_000004655.2_ASM465v1_rm.out1680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           GGGGCAGGGTCCTCAAAATCACTGGTTAAGGACTGATCC-ATAGGGGGTG
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           ---------------------------CGTGTCAAAGGG-GTT-------
GCA_000004655.2_ASM465v1_rm.out1969           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           GAGCCTGAAAGCATGGGTTAAGGGCTTAATTCCCGAACC-ACAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out2082           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2084           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2085           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           GAGGCATG-GACCTCAAAGGACGGATTAAGGAGCGATCC-ATAGGGGGTG
GCA_000004655.2_ASM465v1_rm.out2099           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2177           GGGAGCAGAGGCCTCAAAGCACGGGTTAAGGACTGACCC-GTAGGGGGTA
GCA_000004655.2_ASM465v1_rm.out2178           GGAGCAGA-GGCCTCAAAGCACGGGTTAAGGACTGACCC-GTAGGGGGTA
GCA_000004655.2_ASM465v1_rm.out2191           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           ---------------AAAGTACAGGTTAAGAACTAACCC-ATAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out2246           ----------GGCTTTAAAGCAGGATTAAGGACCGATCC-ATACGACGTG
GCA_000004655.2_ASM465v1_rm.out2310           GGGTA--GAAGTCACAAAGCATAAGTTAAGATCTAATCC-ATAGGAGCG-
GCA_000004655.2_ASM465v1_rm.out2311           AGGGGTAGAGGTCACAAAGCATGGGTTAATAACTGATCG-ATAGGGGATG
GCA_000004655.2_ASM465v1_rm.out2315           ------------------------------ACCTGATCG-ATAGGGGATG
GCA_000004655.2_ASM465v1_rm.out2388           GGGGGT--AGG--------------TGCCTCAAAGCATG-GG--------
GCA_000004655.2_ASM465v1_rm.out2430           ----------GCCTCAAAGCACGGGTTAAGGACTGATCC-ACAGGGAGGG
GCA_000004655.2_ASM465v1_rm.out2502           TTGGGGCTAGGCCTCAAAGCATGGGTTAAGACTCGAACC-ATAGGGGCTA
GCA_000004655.2_ASM465v1_rm.out2507           GGGGTA--GCAAG--AGAGTCCCGTCCCGCGTGTGTGGG-CGT-------
GCA_000004655.2_ASM465v1_rm.out2649           ----ACAGAGGTCTTAAAACA--TGGGTTAATGACAGATCATAAGGACTA
GCA_000004655.2_ASM465v1_rm.out2658           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2710           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2738           GGAAGCAAGGGCCTCAAAGTAACGGTTAAGAATTGATCC-ATAGGTGGTG
GCA_000004655.2_ASM465v1_rm.out2793           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2794           ------TGGGGCCTCAATGCACGGGTTAAGGCCTCAACC-----------
GCA_000004655.2_ASM465v1_rm.out2822           TGGGGCAGGGGCTTCATAGCACAGGTTAAGGACCAATCC-ATTGGGTGTG
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           ATGGGGCTGGGCCTCAAAGCATGGGTTAAGGCCCAAATC-ACAGGGGGCA
GCA_000004655.2_ASM465v1_rm.out2853           GGAGCA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2960           GAGGGCAGGGGGCTAAAAGCACGAAC------------C-ATGGGGAGTG
GCA_000004655.2_ASM465v1_rm.out2961           TGCACGGTAGGGATCTCAGCACGAGTTAAGGCCTGAACC-----------
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           TGGAGCAAGGGCCTCAAAGCACGGGTTAAGGCCCGAGGG-GAGTA-----
GCA_000004655.2_ASM465v1_rm.out3207           TTAGACAAGGATCTCAAAACACGGGTTAATTAAGGCACG-ATTTATAGGG
GCA_000004655.2_ASM465v1_rm.out3276           AG--AGAGGGAGCTCAAAGCACGAGTTAGAGCGGATT-------------
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3461           CCCTGTAGAGGTCTCAAAGCATGTGTTAAGACCTAAACC-ATGAGGGCGG
GCA_000004655.2_ASM465v1_rm.out3530           ---------GGCCTCAAAGCATGGGTTAAGGACCAACCC-ATAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           GGGGGCATGGGCCTCAAAGCATAGGTTAAGGACCGACCT-ATA-------
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           CGAAGTAGGGGTTCTAATGTATGGCTTAAGGCCTCAACC-ATGTGGGATG
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           ----------------------------------GATCC-ATAGGGGTGA
GCA_000004655.2_ASM465v1_rm.out3988           CGGGTTAGGGGCCTCAAAGCACGGGTTAAGGCCCGAACG-ATGGGGGGCA
GCA_000004655.2_ASM465v1_rm.out4037           CATGAGCCCATCCTTGAAGCATGGGTTAAGACCCAATTA-ATAGGGACGG
GCA_000004655.2_ASM465v1_rm.out4038           AGC--------CCTTTAA--ACAAGACAGGATCTCAAAG-----------
GCA_000004655.2_ASM465v1_rm.out4039           TGGGATATAGGATTTAAAGTACTCGTAAAGCCTGAAT------------C
GCA_000004655.2_ASM465v1_rm.out4041           TAAGGGCTGGGCCTCAAAGCATGGCTTAAGGCCCGAACC-ATAGGAGGCG
GCA_000004655.2_ASM465v1_rm.out4043           TAAGGGCTGGGCCTCAAAGCATGGCTTAAGGCCTGAACC-ATAGGAGGCG
GCA_000004655.2_ASM465v1_rm.out4141           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           TGGAGGGCGGGCCCTCGTGTACGGGTTAAGGACCGACCC-ATACGGGGCA
GCA_000004655.2_ASM465v1_rm.out4190           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4193           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4217           TAAGGCAGCAGTCGTAAAGCAAAAGTTAAGGCCCGATTC-ATAGGGGTGA
GCA_000004655.2_ASM465v1_rm.out4331           AGGGGTACAAGCCTAAAAGCACAGATTAAGTATCAATTC-ATATCCGT--
GCA_000004655.2_ASM465v1_rm.out4429           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4474           TGGGACAAGGGTTTCAAAGTATGGGTTAAGACCCCGAAC-AATAGGCGGA
GCA_000004655.2_ASM465v1_rm.out4537           GATAGCTAGGGCCTCAAAGCACGAGTTAAGACCCGATCC-GTAGAGAACG
GCA_000004655.2_ASM465v1_rm.out4544           GAGGTGGAGGCCTTAAA-ACACAAGGACCAATCTATAGG------GGTGA
GCA_000004655.2_ASM465v1_rm.out4603           AAGACGCTGGGCCTCAAAGTATGGGTCAAAACCTAAATC-ATAGAGAGTG
GCA_000004655.2_ASM465v1_rm.out4680           ---------GGCCTCAAAGCATGGGTTAAGGACCGATCC-ATAGGGGGGC
GCA_000004655.2_ASM465v1_rm.out4711           GAGGTAGG-GGCCTTGAAGCACGGGTTAATGACTGATCC-ATAGGGAGCG
GCA_000004655.2_ASM465v1_rm.out4856           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           CAAGAAAGGAGCCTCAAAGTACAGGTTAAGGACCAATCC-ATAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out5202           CCGGGCAGGGACCTCAAACCACAGGTTAAGGACCGATCC-ATAGAGGGCG
GCA_000004655.2_ASM465v1_rm.out5208           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5228           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5229           GGGGGTAGGTGCCTCAAAGCACAGGTTAAGGACTGATCC-ATAGGGAGCG
GCA_000004655.2_ASM465v1_rm.out5245           TGGGGAAGCGGCCTTAAAGTATGGGTTAAGAACCGATTT-ATAGGGGGCA
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           ----GCAGGGGCCTCAACGCATTTGTTAAGGCCTGAACC-ATGGGGTGTG
GCA_000004655.2_ASM465v1_rm.out5492           CGGGCT---------ACGGTGCTGCTGTGTAAGGGTGGG-GCT-------
GCA_000004655.2_ASM465v1_rm.out5541           GAGAGCAGAGGCATCAAAGCACAGGTTAAGGACCTATCT-AAAGAGGGCG
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           GGCAGT--GGC---------------------------------------
GCA_000004655.2_ASM465v1_rm.out5712           TGGGACAGGATCCTTAAAGCACATGTTAAGAACATATAT-ACAGGGAATG
GCA_000004655.2_ASM465v1_rm.out5720           CGGGACAGGGGCCTCAAAGCACAGATTAAGGCCCGAACC-ATGGGGGGCA
GCA_000004655.2_ASM465v1_rm.out5814           ----ACTGTGGTCTTAAAGCACGCGTTAAGGCCCGATTC-ATAAAGGATT
GCA_000004655.2_ASM465v1_rm.out5822           GGGCAG--GGGTCTTAAAGAACGGGTTAAAAACCGATCC-ATA-------
GCA_000004655.2_ASM465v1_rm.out5838           -------------------------------------------------G
GCA_000004655.2_ASM465v1_rm.out5849           TGGGAAATATCATACAA-ACATGGATGAAGAACTGATCC-ATAGGACGTG
GCA_000004655.2_ASM465v1_rm.out5859           ---------GGCCTCAAAGCGCGGGTTAAGGATCGATCT-ATAGGGGCCA
GCA_000004655.2_ASM465v1_rm.out5860           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5861           CAAGGCAAAAACCTCAAAGCACGGATTAAAAACCGAT-------------
GCA_000004655.2_ASM465v1_rm.out5885           GCGGGTAGAGACCTCAAAGCACGGTTAATAATCGATCCACATGGGGGTGA
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           CGGGAT--GAA--------------TCCGCGTGAAGGGG-CC--------
GCA_000004655.2_ASM465v1_rm.out6090           CGAGACAGGGGTTTCAAAGCATGGGTTA-AGGCTTAAACCATAGAGAATA
GCA_000004655.2_ASM465v1_rm.out6091           CGGGGTATCAGCCTTAAAATCTCGGGTTA---------------------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           GTAATTAAGGACCTCAAAGCACAGATTAAA--------------------
GCA_000004655.2_ASM465v1_rm.out6200           CGGAGCAGTGACCTTAAAGCACGGGTTAAGGCTCAACCA-TGG-------
GCA_000004655.2_ASM465v1_rm.out6211           --GAGCAGGGGCCTCAAAACACAGGTTAAGGCCTGAACC-ATTGATGCTA
GCA_000004655.2_ASM465v1_rm.out6243           GAAGCAAA-GGCCTCAAAGCATGGGTTAAGGAGCGATCC-ATAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out6327           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6354           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6420           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6421           ACGAGGCAGGGCCTCAAAGCACGGGGTAAGGACCAATCC-ATAAGGAAC-
GCA_000004655.2_ASM465v1_rm.out6422           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6423           ACGAGGCAGGGCCTCAAAGCACGGGGTAAGGACCAATCC-ATAAGGAAC-
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           AAGGGGCTGGGCCTCAAAGCATGGGTTAAGGCCCGAACC-GCAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out6526           AAGGGGCTGGGCCTCAAAGCATGGGTTAAGGCCCGAACC-GCAGGGGGCG
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           AGGATT--GATCCGTAGAAAACGAGTCCATGTGATAGGG-GG--------
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           ----------ACCTCAAAGCAAGCGTTAAGGACCAATCC-ATATGAGGT-
GCA_000004655.2_ASM465v1_rm.out7043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7044           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           AAGGCCCGAACCGTGTGTGTGTGTGTGGGGGGGGAGGGG-GGGGAGAGTA
GCA_000004655.2_ASM465v1_rm.out7236           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           TGGCGCATGGGCCTTAAAGCACGGGTTAAGGCCCAATCC-ATAGGGGCGG
GCA_000004655.2_ASM465v1_rm.out7378           TGGGGTAGGGACCTCAAAGCATGGGTTAAGGCCCAATCC-ATAGGGAGCG
GCA_000004655.2_ASM465v1_rm.out7392           TGGAGGGTGGGCCTCAAAGCACGGGTTAAGGTTCGATCC-ATTGAGGGCT
GCA_000004655.2_ASM465v1_rm.out7396           AGGGACTAGGAGCCACAAAGCACGGTTAAGTATTGATCC-ATAAGGGACG
GCA_000004655.2_ASM465v1_rm.out7406           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7407           AGGGGTAGGAGGGTCTATAG----------------------GGGGCGAG
GCA_000004655.2_ASM465v1_rm.out7414           GGAGGAAGGGGCCTCAAAACATGGGTTAAAAACAGATCC-ATAAGAGACA
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           GAGCTATGGTGCCTCTGTGTAA----------------------------
GCA_000004655.2_ASM465v1_rm.out7660           ATGGGGCTAGGCCCCAAAGCATGGGCTAATGCCCGAACC-ATAGGGGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     AGGGGCGGAGGCCTTAAAACACAAGTCAAGGACCAATCT-ATAGGGGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   TATAGG--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   CAAGGCAAAAACCTCAAAGCACGGATTAAAAACCGAT-------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   ATAGAGAGAGACCTCAAAGCATGGGTCAGTCTCTAAACC-ATATATAAGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   ---------GGCCTCAAAACACGGGCTAAGGACCAATCC-ATAGGGGGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   GG-AGCAGGGGCCTCAAAGCACAGGTTACGGACTGATCC-ATAGGGGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   -----------------AACATGGGTTAAGTAGCGATTC-ATAGAGGATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   TGGGGCAGGGGCCTCAAAGCACAGGTTAAGGCCTGATCC-ATAAGGGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   TAAGGCAGCAGTCGTAAAGCAAAAGTTAAGGCCCGATTC-ATAGGGGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   TTGACCTATGGAGGACGAGCATGGGTTAAGGACCAATCC-ATAGGGAGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   ------------------------GTTAAGGACCGATCC-ATAGGGGCG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   TGGGGCAGTGGCCTCAAAGCACGGGTTAAGACCCAACCC-ATAGGGGGCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   GAGGTAGG-GGCCTTGAAGCACGGGTTAATGACTGATCC-ATAGGGAGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   GGGGGCAAGAGCCTCAAAGCATGGATTAAGGCCCGATCC-ATAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   ACGAGGCAGGGCCTCAAAGCACGGGGTAAGGACCAATCC-ATAAGGAAC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  AAGGGGCTGGGCCTCAAAGCATGGGTTAAGGCCCGAACC-GCAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  ---------------AAAGTACAGGTTAAGAACTAACCC-ATAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  ACGAGTAAGTGCCTCAAATCAAGGGTTAAAGCCTAAATC-ATGGGGTGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  ----------ACCTCAAAGCAAGCGTTAAGGACCAATCC-ATATGAGGT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  AAGGCCCGAACCATGTGTGTGTGTGTAGGGG-----------GGGGGGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  ATGGGGCTAGGCCCCAAAGCATGGGCTAATGCCCGAACC-ATAGGGGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  CATGAGCCCATCCTTGAAGCATGGGTTAAGACCCAATTA-ATAGGGACGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  ---------GGCCTCAAAGCATGGGTTAAGGACCAACCC-ATAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  TGGGGTAGGGACCTCAAAGCATGGGTTAAGGCCCAATCC-ATAGGGAGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  TGGAGGGTGGGCCTCAAAGCACGGGTTAAGGTTCGATCC-ATTGAGGGCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  AGGGACTAGGAGCCACAAAGCACGGTTAAGTATTGATCC-ATAAGGGACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  CAAGGCAATGGTCTCAAAACACATGTTAAGGCCCAAACC-GTGAGGGCGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  GGCCCTATGGGCCTCAAATCACGGGTTAAGGCCTGATCT-GTAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  ATAGGGCATGGCTTCAAAGCACATGTTAACATCTGATAC-GTAAGAGGC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  GTGGACAG-----TGGTATC----------------------AAAGAACC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  -------------TCAAAGCACACGTTAAGAATCAATCC-ATGGG---GG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  GGGGCAGGGTCCTCAAAATCACTGGTTAAGGACCGATCC-ATAGGGGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  ---------------------------CGTGTCAAAGGG-GTT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  GAGCCTGAAAGCATGGGTTAAGGGCTTAATTCCCGAACC-ACAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  GAGGCATG-GACCTCAAAGGACGGATTAAGGAGCGATCC-ATAGGGGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  GGAGCAGA-GGTCTCAAAGCACGGGTTAAGGACTGACCC-GTAGGGGGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  GGGTA--GAAGTCACAAAGCATAAGTTAAGATCTAATCC-ATAGGAGCG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  -----------TCACAAAGCATGGGTTAATAACTGATCG-ATAGGGGATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  GGGGGT--AGG--------------TGCCTCAAAGCATG-GG--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  ----------GCCTCAAAGCACGGGTTAAGGACTGATCC-ACAGGGAGGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  TTGGGGCTAGGCCTCAAAGCATAGGTTAAGACTCGAACC-ATAGGGGCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  GGGGTA--GCAAG--AGAGTCCCGTCCCGCGTGTGTGGG-CGT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  AAGACGCTGGGCCTCAAAGTATGGGTCAAAGCCTAAATC-ATAGAGAGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  GGAAGCAAGGGCCTCAAAGTAACGGTTAAGAATTGATCC-ATAGGTGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  ----ACAGAGGTCTTAAAACA--TGGGTTAATGACAGATCATAAGGACTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  ------TGGGGCCTCAATGCACGGGTTAAGGCCTCAACC-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  TGGGGCAGGGGCTTCATAGCACAGGTTAAGGACCAATCC-ATTGGGTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  GGAGCA--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  GAGGGTAGGGGGCTGAAAGCACGAAC------------C-ATGGGGAGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  TGCACGGTAGGGATCTCAGCACGAGTTAAGGCCTGAACC-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  ----------GGCTTTAAAGCAGGATTAAGGACCGATCC-ATACGACGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  TGGAGCAAGGGCCTCAAAGCACGGGTTAAGGCCCGAGGG-GAGTA-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  AGGATT--GATCCGTAGAAAACGAGTCCATGTGATAGGG-GG--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  AG--ACAGGGAGCTCAAAGCACGAGTTAGAGCGGATT-------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  AGGGGTAGGAGGGTCTATGG----------------------GGGGCGAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  CCCTGTAGAGGTCTCAAAGCATGTGTTAAGACCTAAACC-ATGAGGGCGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  GGGGGCATGGGCCTCAAAGCATAGGTTAAGGACCGACCT-ATA-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  ----------------------------------GATCC-ATAGGGGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  TAAGGGTAGGGTCTCAAAACATGGGTTAAGACCTAATCC-AAAGAGTCGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  TGGGTTAGGGGCCTCAAAGCACGGGTTAAGGCCCGAACG-ATGGGGGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  GGAAGCATGGGCCTCAAAGAATGAGTTAAGGAACAATCC-ATATGAATGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  TGGAGGGCGGGCCCTCGTGTACGGGTTAAGGACCGACCC-ATACGGGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  AGGGGTACAAGCCTAAAAGCACAGATTAAGTATCAATTC-ATATCCGT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  TGGGACAAGGGTTTCAAAGTATGGGTTAAGACCCCGAAC-AATAGGCGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  GATAGCTAGGGCCTCAAAGCACGAGTTAAGACCCGATCC-GTAGAGAACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  ---------GGCCTCAAAGCATGGGTTAAGGACCGATCC-ATAGGGGGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  CAAGAAAGGAGCCTCAAAGTACAGGTTAAGGACCAATCC-ATAGGGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  CCAGGCAGGGACCTCAAACCACAGGTTAAGGACCGATCC-ATAGAGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  GGGGGTAGGTGCCTCAAAGCACAGGTTAAGGACTGATCC-ATAGGGAGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  TGGGGAAGCGGCCTTAAAGTATGGGTTAAGAACCGATTT-ATAGGGGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  ----GCAGGGGCCTCAAAGCATTTGTTAAGGCCTGAACC-ATGGGGTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  CGGGCT---------ACGGTGCTGCTGTGTAAGGGTGGG-GCT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  GGAGGAAGGGGCCTCAAAACATGGGTTAAAAACAGATCC-ATAAGAGACA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  GAGAGCAGAGGCATCAAAGCACAGGTTAAGGACCTATCT-AAAGAGGGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  ---TGGTCCCTCGTAAAAACATGGGTTATGGACCGATCT-ATAGGGGACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  CGGAGCAGTGACCTTAAAGCACGGGTTAAGGCTCAACCA-TGG-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  GTAATTAAGGACCTCAAAGCACAGATTAAA--------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  GGCAGT--GGC---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  TGGGACAGGATCCTTAAAGCACATGTTAAGAACATATAT-ACAGGGAATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  CGGGACAGGGGCCTCAAAGCACAGATTAAGGCCCGAACC-ATGGGGGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  ----ACTGTGGTCTTAAAGCACACGTTAAGGCCCGATTC-ATAAAGGATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  GGGCAG--GGGTCTTAAAGAACGGGTTAAAAACCGATCC-ATA-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  -------------------------------------------------G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  TGGGAAATATCATACAAAACATGGATGAAGAACTGATCC-ATAGGACGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  ---------GGCCTCAAAGCGCGGGTTAAGGATCGATCT-ATAGGGGCCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  GCGGGTAGAGACCTCAAAGCACGGTTAATAATCGATCCACATGGGGGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  TGGGACAGGAGTCTCAAAGCACGGGTCAAGGCCCAAACC-ATGGGGAG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  CGGGAT--GAA--------------TCCGCGTGAAGGGG-CC--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  ATGGGGCTGGGCCTCAAAGCATGGGTTAAGGCCCAAATC-ACAGGGGGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  CGAGACAGGGGTTTCAAAGCATGGGTTAAAGGCTTAAACCATAGAGAATA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  CGGGGTATCAGCCTTAAAATCTCGGGTTA---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --GAGCAGGGGCCTCAAAACACAGGTTAAGGCCTGAACC-ATTGATGCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  GAAGCAAA-GGCCTCAAAGCATGGGTTAAGGAGCGATCC-ATAGGGGGCG

GCA_000004655.2_ASM465v1_rm.out126            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out180            GAC-GGATCACGTG-------T------TAA-GG-GGTTA--GGATTCGT
GCA_000004655.2_ASM465v1_rm.out328            -------------------------------------------TTCGTGA
GCA_000004655.2_ASM465v1_rm.out372            AGT-CCGT-----------------GTGTGGAGG-GCCAG-GGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out373            TTC-TCC-----AT-------G------TAT-GG-GACCA--GCTCGTGG
GCA_000004655.2_ASM465v1_rm.out391            AGT-CCGC-----------------GTGTGGGGG-GCCAG-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out395            AGT-CCGC-----------------GTGTGGGGA-GCCAA-GGTTCATGG
GCA_000004655.2_ASM465v1_rm.out396            AGT-CCGC-----------------ATGTGGGGA-GCCAG-GGTTCATGG
GCA_000004655.2_ASM465v1_rm.out561            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out633            GCT-CCCCATCTAC---------------AG-GG-GACATGCTTTCGTG-
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            AGT-CCAC-----------------GTGTGGGGG-GCTGG-GTTTAGTGG
GCA_000004655.2_ASM465v1_rm.out818            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out838            ------------------------------------TTAA----------
GCA_000004655.2_ASM465v1_rm.out884            ACT-CCCCATTTTT---------------GGGAG-GACCGGCTTTCGTG-
GCA_000004655.2_ASM465v1_rm.out910            GCT-CCCCATGTAG---------------GA-GG-ACCAGCTTTTGTGG-
GCA_000004655.2_ASM465v1_rm.out1025           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1172           TCT-GCG-----CG-------T------CAA-GG-AGCCA--GGTTCGTG
GCA_000004655.2_ASM465v1_rm.out1226           ATC-TGTGTGTCA------------------AGA-TGCCAGAGTGTGTGC
GCA_000004655.2_ASM465v1_rm.out1247           ACT-CCTTGTGTAG---------------GG-GG-GACCGTCTATTGTG-
GCA_000004655.2_ASM465v1_rm.out1320           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           AGT-CCGTATAGG--------G------GTCGGG-GGGCAGAGTTCGCGA
GCA_000004655.2_ASM465v1_rm.out1649           AGT-CCTTGTGTG-----------------GGGG-CTA-AGGTTTCGTAG
GCA_000004655.2_ASM465v1_rm.out1679           GTT-TGCGTGTGTGTGTGGGGGGGGG--GGGAGG-GGTGAGGGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out1680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           G------------------------GTCCTCAAA-AGCTG-GGTTCATGG
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           -----------------------------AG--G-GTTCATGGTTTT---
GCA_000004655.2_ASM465v1_rm.out1969           -----------------------------------------GATTCGTGG
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           GCA-TCCCCATGT--------ATG-----AGGGG-GGCCGGCTTCTGTGA
GCA_000004655.2_ASM465v1_rm.out2082           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2084           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2085           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           AAT-CTAT-----------------GAGTGTAGG-ACTAG-GGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out2099           -------------------------------------------TTTGTGG
GCA_000004655.2_ASM465v1_rm.out2177           AGT-ATGCGTGTG-----------------GGGG-GCC-AAGGTTCATGG
GCA_000004655.2_ASM465v1_rm.out2178           AGT-ATGC-----------------GTGTGGGGG-GCCAG-GGTTCATGG
GCA_000004655.2_ASM465v1_rm.out2191           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           AGC-CG-------------------GTGTGTGGGGGCAAGGGTCAGTTGC
GCA_000004655.2_ASM465v1_rm.out2246           AGT-CCGC-----------------GTGTTAGGG-GCCAG-GTTTCGTGG
GCA_000004655.2_ASM465v1_rm.out2310           --A-GTAC-----------------GCGTGTGGG-GTTTA-GAATTTGTG
GCA_000004655.2_ASM465v1_rm.out2311           AGT-CT-------------------GCGTGTGGGGCCTAGGATTCGTGGC
GCA_000004655.2_ASM465v1_rm.out2315           AGT-CT-------------------GCGTGTGGGGCCTAGGATTCGTGGC
GCA_000004655.2_ASM465v1_rm.out2388           ------------------------------------TTAA----------
GCA_000004655.2_ASM465v1_rm.out2430           GCT-GGCTTT-----------------------------------CATG-
GCA_000004655.2_ASM465v1_rm.out2502           GC---------------------------------TTTTGTCTTTCGTGG
GCA_000004655.2_ASM465v1_rm.out2507           -----------------------------TAG-G-TTTCATGGCTTC---
GCA_000004655.2_ASM465v1_rm.out2649           GTC-CGC-----AT-------G------TAT-GG-GCCAAAGTTC-GTGG
GCA_000004655.2_ASM465v1_rm.out2658           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2710           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           ----------------------------------------------GTGG
GCA_000004655.2_ASM465v1_rm.out2738           AGT-CTGGGTGTGG---------------AGGCT-TATT-----------
GCA_000004655.2_ASM465v1_rm.out2793           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2794           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2822           AGT-CAGCAAGTG-----------------GAGG-GCT-TGGGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           GCA-TCCCCATGT--------ATG-----AGGGG-GACCAGCTTTCGTGA
GCA_000004655.2_ASM465v1_rm.out2853           -------------------------------GGG-GCC-TAGGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out2861           ---------------------------------------A-GGGTTCGTG
GCA_000004655.2_ASM465v1_rm.out2960           GAT-CCGTGTGTC-----------------AATG-GGCTAGGGTTCACGG
GCA_000004655.2_ASM465v1_rm.out2961           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3162           --T------------------CAACGTATCAAGGGGCCAG-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out3207           GAC-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           --C-TGC-----AT-------G------TCGAGA-GGCTAGGCTTCGTGA
GCA_000004655.2_ASM465v1_rm.out3315           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3316           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3338           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3461           ATC-CAC-----GT-------G------TCA-AG-TAG------------
GCA_000004655.2_ASM465v1_rm.out3530           AGT-C--------------------CACGTGGGGGGCCAG-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           -----------------------------GGGGA-CTAATCCACATGTGG
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           GAT-CCGTGAGT-----------------CAAGG-GACCTAGGTTGGTGG
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           -------------------------------GGG-CCC-AGGGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out3679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3681           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           GTT-CCGTATGTG-----------------GAGG-TCA---------AGG
GCA_000004655.2_ASM465v1_rm.out3988           GGT-CTGCGTGTC-----------------AAGG-GGCCAGGGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out4037           CTC-CCC-----AT-------G----------------------------
GCA_000004655.2_ASM465v1_rm.out4038           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4039           ATG-GGG-----GT-------A------GGT----CCGCATG--------
GCA_000004655.2_ASM465v1_rm.out4041           GCA-TCCCCATGT--------ATG-----AGGGG-GACTAGCTTTGGTGA
GCA_000004655.2_ASM465v1_rm.out4043           GCA-TCCCCATGT--------ATG-----AGGGG-GACTAGCTTTGGTGA
GCA_000004655.2_ASM465v1_rm.out4141           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           AGT-CCGT-----------------GTGTGAGGG-GCCAG-GGTTCGTAG
GCA_000004655.2_ASM465v1_rm.out4190           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4193           --------------------GTGTCC--TGGGCA-AGTTGGCCTTCGAGG
GCA_000004655.2_ASM465v1_rm.out4217           C-T-CCTTGTGTAG---------------GG-AG-GATTGACTTCCGTG-
GCA_000004655.2_ASM465v1_rm.out4331           ---------------------G------TAG-GG-GGAC-----------
GCA_000004655.2_ASM465v1_rm.out4429           ---------CGTG-----------------TTGG-GGTTAGAGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out4474           TCC------------------------------G-TGTGAGGGTTCATGG
GCA_000004655.2_ASM465v1_rm.out4537           ATA-TTCCTAGTGT-------A------GGG-AG-GATAGACTTTCGTGA
GCA_000004655.2_ASM465v1_rm.out4544           GCC-CGT-----GT-------G------TGT-AG-GTTGG----------
GCA_000004655.2_ASM465v1_rm.out4603           ATA-TCCCCATAT--------ATG-----AGG-A-GACTAGCTTTTGGGA
GCA_000004655.2_ASM465v1_rm.out4680           GAGTCCGC---------GTGTGGGGGGGCCACTGGGCCAG-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out4711           AGA-TCGC-----------------ATGTGGGGG-ATCAG-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out4856           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           AGT-CCGCGTGTGGGGTGTTGGGGGGAGGGGGGGGTGCAG-TGTTCATGC
GCA_000004655.2_ASM465v1_rm.out5202           AGT-CCGC-----------------GTGTGTGGG-GCCAG-GGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out5208           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5228           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5229           AGC-CCGCATGTG-----------------GTGG-GCT-AGGGCTCGTGG
GCA_000004655.2_ASM465v1_rm.out5245           GCT-TCCCGTGTAG---------------GGGAA-CCGGTTTT--CATG-
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           GAT------------------CCGCGTGTCAAGGGGCCAA-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out5492           -----------------------------GG--G-GTTCG--------GG
GCA_000004655.2_ASM465v1_rm.out5541           AGT-CCATGTGTGG---------------GGCTA-AGGATTC----ATA-
GCA_000004655.2_ASM465v1_rm.out5599           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5712           AGT-TCACATG-------------------TAGG-TGTAAGGGTCCGTGG
GCA_000004655.2_ASM465v1_rm.out5720           GGT------------------CCTCGTGTCAAGGGACCAG-GGTTCATGG
GCA_000004655.2_ASM465v1_rm.out5814           GCT-CCCTCTGTGTGTTGTGGGGGTGTGGGGGGG-GGGGGGGATTTGTGA
GCA_000004655.2_ASM465v1_rm.out5822           -----------------------------GAA-G-CTACTCCGCATGTGA
GCA_000004655.2_ASM465v1_rm.out5838           GGC-CCT-----CT-------G------TAT-GG-AAGG-----------
GCA_000004655.2_ASM465v1_rm.out5849           AGA-TCCCTTTT------------------GCAG-GATCAATGTTCATGA
GCA_000004655.2_ASM465v1_rm.out5859           AGT-CCGC-----------------GTGTAGGGGGGCCAG-AGTTTTTGG
GCA_000004655.2_ASM465v1_rm.out5860           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           ATT-CGC-----GT-------G------TGG-GA-GGCTAGATTTCGGGG
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           ------------------------------------CAGG----------
GCA_000004655.2_ASM465v1_rm.out6090           AGA-TCG-----GC-------A------GGT----TCATAGCCTT----A
GCA_000004655.2_ASM465v1_rm.out6091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------AA-GGATCAGGCTCGTGA
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           -----------------------------GGA-G-CGAAACCGTGTGTTA
GCA_000004655.2_ASM465v1_rm.out6211           GTC-CGTGTGTCA-------------------AG-AGCTAGGGTTCTTGG
GCA_000004655.2_ASM465v1_rm.out6243           AGT-CCAC-----------------GTGTGGGGG-GCCAG-GATTCGTGG
GCA_000004655.2_ASM465v1_rm.out6327           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6354           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6420           ---------------------------------------AGTGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           ---------------------------------------AGTGTTTGTGG
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6448           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6525           GCA-TCCCCATGT--------ATG-----AGGGG-GATCAGCTTTTGTGA
GCA_000004655.2_ASM465v1_rm.out6526           GCA-TCCCCATGT--------ATG-----AGGGG-GATCAGCTTTTGTGA
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           ------------------------------------TAGG----------
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           -----------------------------------GACTC-CTCTCGTGG
GCA_000004655.2_ASM465v1_rm.out7043           -----------------TAAAGCACGGCTTAAGG-AACCAGGGTTCATGG
GCA_000004655.2_ASM465v1_rm.out7044           -----------------TAAAGCACGGCTTAAGG-AACCAGGGTTCATGG
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           GAT------------------CCATGTGTGAAGGGCCCAG-GGTTCGTGG
GCA_000004655.2_ASM465v1_rm.out7236           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           GGC-AGCTGCACGTTTAGGGGGGG-----GGGGG-GACCAGCTTTCGTGA
GCA_000004655.2_ASM465v1_rm.out7378           ACT-CATCGTGTAG---------------GG-GG-GACAAGCTTTTGTG-
GCA_000004655.2_ASM465v1_rm.out7392           TCT-CCCCATGTAG---------------GG-AA-AACCGGTTTTTGTG-
GCA_000004655.2_ASM465v1_rm.out7396           AGT-C--------------------CACATATGG-GGACAGGGTTCGTAG
GCA_000004655.2_ASM465v1_rm.out7406           -----------------------------------------GGTTCGTAT
GCA_000004655.2_ASM465v1_rm.out7407           TCT-ACATTTGGG--------G------GGGGGG-GGTGTGGATTCACGG
GCA_000004655.2_ASM465v1_rm.out7414           AGG-CCACGTG-------------------TGGG-GACCAAAGTTTGTAG
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           ---------------------G------GGT-GG-GGCAGGCGGGTCGGG
GCA_000004655.2_ASM465v1_rm.out7660           GCG-TCCCCATGT--------ACG-----AGGGG-GACTAGTTTTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     GCC-CGTGTG--------------------TGGG-GGTCAGAATTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   GAC-GGATCACGTG-------T------TAA-GG-GGTTA--GGATTCGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   -------------------------------------------TTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   AGT-CCGT-----------------GTGTGGAGG-GCCAG-GGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   AGT-CCGC-----------------GTGTGGGGG-GCCAG-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   AGC-----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   GCT-CCCCATCTAC---------------AG-GG-GACATGCTTTCGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   C-T-CCTTGTGTAG---------------GG-AG-GATTGACTTCTGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   AGT-CCAC-----------------GTGTGGGGG-GCTGG-GTTTAGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   AGT-CCGC-----------------GTGTGGGGG-GCCAG-GGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   ACT-CCCCATTTTT---------------GGGAG-GACCGGCTTTCGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   AGA-TCGC-----------------ATGTGGGGG-ATCAG-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   GCT-CCCCATGTAG---------------GA-GG-ACCAGCTTTTGTGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   ---------------------------------------AGTGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  GCA-TCCCCATGT--------ATG-----AGGGG-GATCAGCTTTTGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  AGC-CG-------------------GTGTGTGGGGGCAAGGGTCAGTTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  TCT-GCG-----CG-------T------CAA-GG-AGCCA--GGTTCGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  -----------------TAAAGCACGGCTTAAGG-AACCAGGGTTCATGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  -----------------------------------GACTC-CTCTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  GAT------------------CCATGTGTGAAGGGCCCAG-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  GCG-TCCCCATGT--------ACG-----AGGGG-GACTAGTTTTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  CTC-CCC-----AT-------G----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  AGT-C--------------------CACGTGGGGGGCCAG-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  ACT-CATCGTGTAG---------------GG-GG-GACAAGCTTTTGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  TCT-CCCCATGTAG---------------GG-AA-AACCGGTTTTTGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  AGT-C--------------------CACATATGG-GGACAGGGTTCGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  -----------------------------------------GGTTCGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  ATC-TGTGTGTCA------------------AGA-TGCCAGAGTGTGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  ACT-CCTTGTGTAG---------------GG-GG-GACCGTCTATTGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  AGT-CCGTATAGG--------G------GTCGGG-GGGCAGAGTTCGCGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  AGT-CCTTGTGTG-----------------GGGG-CTA-AGGTTTCGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  G------------------------GTCCTCAAA-AGCTG-GGTTCATGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  -----------------------------AG--G-GTTCATGGTTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  -----------------------------------------GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  GCA-TCCCCATGT--------ATG-----AGGGG-GGCCAGCTTCTGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  AAT-CTAT-----------------GAGTGTAGG-ACTAG-GGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  -------------------------------------------TTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  AGT-ATGC-----------------GTGTGGGGG-GCCAG-GGTTCATGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  --A-GTAC-----------------GCGTGTGGG-GTTTA-GAATTTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  AGT-CT-------------------GCGTGTGGGGCCTAGGATTCGTGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  ------------------------------------TTAA----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  GCT-GGCTTT-----------------------------------CATG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  GC---------------------------------TTTTGTCTTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  -----------------------------TAG-G-TTTCATGGCTTC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  ATA-TCCCCATAT--------ATG-----AGG-A-GACTAGCTTTTGGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  ----------------------------------------------GTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  AGT-CTGGGTGTGG---------------AGGCT-TATT-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  GTC-CGC-----AT-------G------TAT-GG-GCCAAAGTTC-GTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  AGT-CAGCAAGTG-----------------GAGG-GCT-TGGGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  -------------------------------GGG-GCC-TAGGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  ---------------------------------------A-GGGTTCGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  GAT-TCGTGTGTC-----------------AATG-GGCTAGGGTTCACGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  AGT-CCGC-----------------GTGTTAGGG-GCCAG-GTTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  --T------------------CAACGTATCAAGGGGCCAG-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  ------------------------------------TAGG----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  --C-TGC-----AT-------G------TCGAGA-GGCTAGGCTTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  TCT-ACATTTGGG--------G------G-GGGG-GGTGTGGATTCACGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  ATC-CAC-----GT-------G------TCA-AG-TAG------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  -----------------------------GGGGA-CTAATCCACATGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  -------------------------------GGG-CCC-AGGGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  GTT-CCGTATGTG-----------------GAGG-TCA---------AGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  TTC-TCC-----AT-------G------TAT-GG-GACCA--GCTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  GGT-CTGCGTGTC-----------------AAGG-GGCCAGGGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  GTT-TGCGTGTGTGTGTGGGGG-----------G-GGTGAGGGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  AGT-CCGT-----------------GTGTGAGGG-GCTAG-GGTTCGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  ---------------------G------TAG-GG-GGAC-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  ---------CGTG-----------------TTGG-GGTTAGAGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  TCC------------------------------G-TGTGAGGGTTCATGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  ATA-TTCCTAGTG--------TAA------GGAG-GATAGACTTTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  GAGTCCGC---------GTGTGGGGGGGCCACTGGGCCAG-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  AGT-CCGCGTGTGGGGTGTTGGGGGGAGGGGGGGGTGCAG-GGTTCATGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  AGT-CCGC-----------------GTGTGTGGG-GCCAG-GGTTTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  AGC-CCGCATGTG-----------------GTGG-GCT-AGGGCTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  GCT-TCCCGTGTAG---------------GGGAA-CCGGTTTT--CATG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  GAT------------------CCGCGTGTCAAGGGGCCAA-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  -----------------------------GG--G-GTTCG--------GG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  AGG-CCACGTG-------------------TGGG-GACCAAAGTTTGTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  AGT-CCATGTGTGG---------------GGCTA-AGGATTC----ATA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  AGT-CCGC-----------------GTGTGGGGA-GCCAA-GGTTCATGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  -----------------------------GGA-G-CGAAACCGTGTGTTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------AA-GGATCAGGCTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  AGT-TCACATG-------------------TAGG-TGTTAGGGTCCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  GGT------------------CCTTGTGTCAAGGGACCAG-GGTTCATG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  GCT-CCCTTTGTGTGTTGTTGGG------------GGGGGGGATTTGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  -----------------------------GAA-G-CTACTCCGCATGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  GGC-CCT-----CT-------G------TAT-GG-AAGG-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  AGA-TCGCTTTT------------------GCAG-GATCAAGGTTCATGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  AGT-CCGC-----------------GTGTAGGGGGGCCAG-AGTTTTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  ATT-CGC-----GT-------G------TGG-GA-GGCTAGATTTCGGGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  --T------------------GGATCTATGTGGGGGCCAA-GGTTCGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  ------------------------------------CAGG----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  GCA-TCCCCATGT--------ATG-----AGGGG-GACCAGCTTTCGTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  AGA-TCG-----GC-------A------GGT----TCATAGCCTT----A
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  GTC-CGTGTGTCA-------------------AG-AGCTAGGGTTCTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  AGT-CCAC-----------------GTGTGGGGG-GCCAG-GATTCGTGG

GCA_000004655.2_ASM465v1_rm.out126            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out180            GTTTTTT-C--TCGACTGGTTTTGGCTAAGATTCTTCTGC----T-----
GCA_000004655.2_ASM465v1_rm.out328            TATTTCTTG--GCCTGGCTCCGG-TTGAGCTCTTCTTAAT-------GAA
GCA_000004655.2_ASM465v1_rm.out372            CTTTTCTC---GGTCGGTTTGGTTGAGGCTTCCTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out373            TCTTCCT-C--ACCCCAAGT-TTGACGAGTTTTTTTTTTC----TTAAT-
GCA_000004655.2_ASM465v1_rm.out391            CTTTTCTC---GACCGGTTTGGTTGAGGCTTCTTCTTAAT----GAAAAG
GCA_000004655.2_ASM465v1_rm.out395            CTTTTCTT---GGCCAGTTTGGTTGAGGCTTTTTCTTGTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out396            CTTTTCTT---GGCTAGTTTGGTTGAGGCTTTTTCTTGTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out561            --------------------GGTTGTGGCTTTTCTTC-------AATTAA
GCA_000004655.2_ASM465v1_rm.out633            GCTTTTCTC--GGCCCAGGTTTCGGGTGCTTCTTCTTAAT----TGAAAT
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            CCTTTCTC---GGTCGGATTGGTTGAAGCTTCTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out818            ---------------------TT-GAGGTTTCTTCTTAATGAAAAGCTGT
GCA_000004655.2_ASM465v1_rm.out838            -GGAC---C--GATCCATAGGGG---------------------------
GCA_000004655.2_ASM465v1_rm.out884            ACCTTTCTC--GGCCCTGGTTTTAGATGCTTCTTCTTAGT----TGCAAT
GCA_000004655.2_ASM465v1_rm.out910            CCTTTCTGG--GGCCTCGGTTTCAGGTGCTTCTTCTTAAT----TGAAAT
GCA_000004655.2_ASM465v1_rm.out1025           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1172           GC------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1226           CCTTTCGCT--ATTAGCTTTGGTTGAGGTTTCTCTTAGCT----TGAAAA
GCA_000004655.2_ASM465v1_rm.out1247           ACCTTTCTC--GGCC-----------------------------------
GCA_000004655.2_ASM465v1_rm.out1320           ---------------GGTTTAAT-TGAGGTTTCTTCTTCT----TAATAA
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           TCTTTCTCG--GACAGAT-TGGTTGAGACTTATTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out1649           CTTTTCTCG--GCCGTTTTGGTT-AAGGTTTTCTCTTCTT----AGTAAA
GCA_000004655.2_ASM465v1_rm.out1679           CTTTTCT-C--GGTTGGTTTGATGGAGCCTTCTTCTTAAT-----GAAAA
GCA_000004655.2_ASM465v1_rm.out1680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           CCTTTCTC---GGCTGTTTTGGTTGAGGCTTTTTCTTCTC----AATAAA
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           -TCTC---G--GACGTCTTTGGCTAAGGCTTCTTCTTA-G----TTTGAG
GCA_000004655.2_ASM465v1_rm.out1969           CTTTTCTCG--GCCAGTTTGGTT-GAGGCTTCTTCTTA-------ATGAA
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           CCTTTCT-T--GGCTGGGCTCCGGTTGAGCTCTTCTTTGT-----GAAAT
GCA_000004655.2_ASM465v1_rm.out2082           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2084           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2085           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           CTTTTCTC---GGTCAGTTTACTTGGGGCTTCTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2099           CCTTTCGCG--ATTAATTTGGTT-GAGACTTCTTCTTAATGGCAAGCCAT
GCA_000004655.2_ASM465v1_rm.out2177           CTTTTCTCA--GCCAGTTNGGTT-GAGGCTTCTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2178           CTTTTCTC---AGCCAGTTTGGTTGAGGCTTCTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2191           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           CTTTCTTG---AACTTGTTTGGTTAAGGCTTCCTGTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2246           CTTTTCTT---AGTCGGTTTGGTTGAGGCTTCTTCTTCTT----AATGTG
GCA_000004655.2_ASM465v1_rm.out2310           GCTTTCTT---GGACGGTTTGGCTGAGACTTTTTCTTCCT----AATAAA
GCA_000004655.2_ASM465v1_rm.out2311           TTTTTCTT---GGATGGTTTGGTTGAGACCTTTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2315           TTTTTCTT---GGATGGTTTGGTTGAGACCTTTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2388           -G------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2430           ACCATTTTC--G-GTCTAGTTTCAGGTGCTTC---TTAAT----TATAAT
GCA_000004655.2_ASM465v1_rm.out2502           CCTTTCT-T--AGCCGAGCTCTGGTTGAGCTCTTCTTAGT-----GAAAT
GCA_000004655.2_ASM465v1_rm.out2507           -TCTT---G--GCCGGGTTTAGTCAAGACTTTTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2649           CCTTTTT-T--------------AGCCAGTTTGGTTGAAG----CTTTTT
GCA_000004655.2_ASM465v1_rm.out2658           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2710           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           CTTTTGTCC--GCCGGTTTGGGT-GAGACTTCTTTTTCTT----AATAAA
GCA_000004655.2_ASM465v1_rm.out2738           ----------------------------------CTTAAT----GAAAAA
GCA_000004655.2_ASM465v1_rm.out2793           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2794           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2822           CTTTTCTCG--TCCGATTTGGTT-GAGATTTCTCCTTCTT----TGTGAA
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           CCTTTAT-T--GGCCGGGCTCCGGTTGAGCTCTTCTTAGT-----GAAAA
GCA_000004655.2_ASM465v1_rm.out2853           CTTTACTCA--ACCGGTTTGGTT-AAAAGTTTATTCTTCT----TAACAA
GCA_000004655.2_ASM465v1_rm.out2861           GCTTTCTC---AGTCAGTTTTATTGTGGCT---TCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out2960           CCTTTCTCG--GCTAGTTTTGGC-AATGTTTCTTCTTAGT-------GAA
GCA_000004655.2_ASM465v1_rm.out2961           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           CTTTTCTCG--ACCGGGCAAGG----AAGAGCTTCTTCTT----AGTGCA
GCA_000004655.2_ASM465v1_rm.out3162           CCTTTTTCTCAGCTGACTGTGGCTGAG-TTTC---TTCTT----AGGAAA
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           CCTTTTT-T--T---------TTAACTGAATTTGGTCGAG----GTCTTT
GCA_000004655.2_ASM465v1_rm.out3315           --------G--TCGGTT-TGGTT-GAGGCTTTTTCTTTCT----TAATGA
GCA_000004655.2_ASM465v1_rm.out3316           --------G--TCGGTT-TGGTT-GAGGCTTTTTCTTTCT----TAATGA
GCA_000004655.2_ASM465v1_rm.out3338           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3461           --------------GCAAGG-TTCATGGCTTTTTTTAGC-----------
GCA_000004655.2_ASM465v1_rm.out3530           CCTTTCTT---GGCTGGTTTGGTTGGGCCTTCTTCTTAAT----GAAAA-
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           GGGGT---C--A--------------------------------------
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           CCTTTCTTG--GCTACTTTTGACTGAAGTTTTGTCTTAGC----TTGAAA
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           CCTTTCTTG--ACTAGCTTTGTCTGTGGTTTCTTCTTAG-----CTTGAA
GCA_000004655.2_ASM465v1_rm.out3679           CCTTTCTCG--ATCGGTTTTGTT-GAGATTTCTTCTTAGTGCAAAGACAT
GCA_000004655.2_ASM465v1_rm.out3681           CCTTTCTCG--ATCGGTTTTGTT-GAGACTTCTTCTTAGTGCAAAGACAT
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           TTCACGTTA--GCC-GATTTGGTTGAGGTTGCTTCTA--------ATAAA
GCA_000004655.2_ASM465v1_rm.out3988           CATTTCTTG--ACCGGCTTTTGCTGAGGTTTCTTCTTAG-------CGCA
GCA_000004655.2_ASM465v1_rm.out4037           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4038           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           CCTTTCT-T--GGCTGGGCTCCGATTGAGCTCTTCTT-------------
GCA_000004655.2_ASM465v1_rm.out4043           CCTTTCT-T--GGCTGGGCTCCGATTGAGCTCTTCTT-------------
GCA_000004655.2_ASM465v1_rm.out4141           -----------------------GCCGGCCTAGT----------------
GCA_000004655.2_ASM465v1_rm.out4184           TCTTTCTC---GGCCGATTTGGTTGAGGCTTCCTATTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out4190           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4193           CGTTTTCTC--GATCGAGCTAGGAAGAGCTGCTTCTTAGT-----GCAAA
GCA_000004655.2_ASM465v1_rm.out4217           GACTTTCTC--AGCCCTGGTTTCAGGTGTTTCTTCTTGAT----TGAAAT
GCA_000004655.2_ASM465v1_rm.out4331           -----------------CGTTTCGGGTGCCTTTTCT--------------
GCA_000004655.2_ASM465v1_rm.out4429           CCTTTCTCG--TT------CGGTTAAGGCTTCTTTTTAAT-------AAA
GCA_000004655.2_ASM465v1_rm.out4474           CCTTTCTCG--ACTGATTTTGGCTAAGGTTTCTTCTTAAC----TTGAAA
GCA_000004655.2_ASM465v1_rm.out4537           TATTTTT-T--TACCCCGGTTTTGTATGCTTCTTCTTAAT----TGAAAT
GCA_000004655.2_ASM465v1_rm.out4544           CATTTCT-C--------------GACAGATTTGGTTGAGG----CT----
GCA_000004655.2_ASM465v1_rm.out4603           TCTTTCT-T--GGTCAGGCTCCGATTAAGCTCTTCTTAGT-----GAAAT
GCA_000004655.2_ASM465v1_rm.out4680           CCTTTCTT---GGCTGGGTTGGCTGAGGCT-CTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out4711           CCTTTCTT---GGCCGGTTTGGTTGAGGCTTCTTC---TT----AATGAA
GCA_000004655.2_ASM465v1_rm.out4856           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           CTTTTCTC---ATCCAGTTTGGTTGAGGCCTGTTCTTATT----AATGAA
GCA_000004655.2_ASM465v1_rm.out5202           CTTTTCTT---GGCCGCTTTGGTTGAGGCTTCTTCTAAAT----GAAAA-
GCA_000004655.2_ASM465v1_rm.out5208           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5228           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5229           CTTTTCTCG--ACCGGTTTGGTT-GAGGCTTCTTCTTA-------ATGGA
GCA_000004655.2_ASM465v1_rm.out5245           ATACTTATT--GGCC-----------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           CCTTTCTCG--GCTGGCTTTGGCTGAGGTTTCTTCTTAGT----GAAA--
GCA_000004655.2_ASM465v1_rm.out5492           GGTTT---T--CTCAACTTGCGTGAGAA---GGTTTTCTA----TGCAAA
GCA_000004655.2_ASM465v1_rm.out5541           ATCTCTCTC--GACTGATTTGGTTGAAATTTCTTCTTAAT----AAGAAA
GCA_000004655.2_ASM465v1_rm.out5599           ----------------TTTAGTT-GAGACTTCTTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5712           CTTTTCT-T--AATCAGTTTGATTAAAGCTTCTTCCTCT-----------
GCA_000004655.2_ASM465v1_rm.out5720           ACTTTCTTG--GCTGGCTTTGGCTGCTGAGGCTTCTTCGT----GAAAAA
GCA_000004655.2_ASM465v1_rm.out5814           CTTTTCTCT--TGCCCCGGTTTCGAGTGCTTCTTCTT-------------
GCA_000004655.2_ASM465v1_rm.out5822           AAGAC---C--AACCATTTTATTGAGGCTTTTTTCTTTTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out5838           ----CCT-G--GGCC-----------------------------------
GCA_000004655.2_ASM465v1_rm.out5849           ACTTTCT-C--AACTGGTGTAGA---TGAGGCTTCTTGAT----AAAAAA
GCA_000004655.2_ASM465v1_rm.out5859           CTTTTCTC---GGCCAGTTTGGTTAAGGCTTCTTCTAAAT----GAAAAA
GCA_000004655.2_ASM465v1_rm.out5860           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           CATTTCT-C--------------AGCTGGTTCTTCTCAAC----CAAAAG
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           -GTTC---G--TGACTTTTCTTATCCAGTTTGGTTAAGAC----TCCT--
GCA_000004655.2_ASM465v1_rm.out6090           CACATGG-T--------------------TTTGACTGAAG----TTTCTT
GCA_000004655.2_ASM465v1_rm.out6091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6198           TCTTTCTCA--GCCGGCTTTGGTTAAGATTTATTATTCTT----A-----
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           AGAGC---C--CAAGGTT--------------------------------
GCA_000004655.2_ASM465v1_rm.out6211           TTTTTCTTG--GCT------------GGATTTGGATTAGT-----GAAAA
GCA_000004655.2_ASM465v1_rm.out6243           CCTTTCTC---GGCCAGTTTGGTTGAGGCTTCTTCTTAAT----GAAAA-
GCA_000004655.2_ASM465v1_rm.out6327           ---------------------------------------------GTTGA
GCA_000004655.2_ASM465v1_rm.out6354           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6420           CTTTTCTTG--ACTAGTTTGGTT-GATGGTTATTCTTCAT----AATGAA
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           CTTTTCTTG--ACTAGTTTGGTT-GATGGTTATTCTTCAT----AATGAA
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6448           ------------------TGGTT-GAGGATTCTTCTTTTT----AATAAA
GCA_000004655.2_ASM465v1_rm.out6525           CCTCTCT-T--GGCTGGGCTCCGGTTGAGCTCTTCTTAGT-----GAAAT
GCA_000004655.2_ASM465v1_rm.out6526           CCTCTCT-T--GGCCGGGCTCCGGTTGAGCTCTTCTTAGT-----GAAAT
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           -GTTC---A--TGGTCTTTCTCAGCCAGTTTGGTCTTCTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           GTTTTCTC---GGCTGGTTTGGTTGAGGCTTCTTCTTTGT----GAAAA-
GCA_000004655.2_ASM465v1_rm.out7043           CTTTTCTC---GGTTGGTTTGGATGAGACTTTTTCTTTTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out7044           CTTTTCTC---GGTTGGTTTGGATGAGACTTTTTCTTTTT----AATGAA
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           CCTTTCTCA--GTTAGCTTTGGCTGAGCTTTCTTCTTAGC----ATAAAA
GCA_000004655.2_ASM465v1_rm.out7236           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           TCTTTCTGG--GCCC---CTGGTTTCCGGTGCTTCTTAGT-----CACAA
GCA_000004655.2_ASM465v1_rm.out7378           GCCTTTCTC--AGCCCCAGTTTTGGGTGCCTCTTCTTAAT----TGAAAG
GCA_000004655.2_ASM465v1_rm.out7392           ACCGTTCTC--GGCCCCAGTTTCGGGTGCTTTTTCTTAGT----TGCAAT
GCA_000004655.2_ASM465v1_rm.out7396           CTTTAATT---GGCCGGTTTCCATGAGGCTTCTTCTACCA----AATGAA
GCA_000004655.2_ASM465v1_rm.out7406           CCTTTCTCG--AATGAGTTGTTT-GAGGCTTCTTTTTAAT-------GAA
GCA_000004655.2_ASM465v1_rm.out7407           CCTTTCTT---GACCGGTTTGGTTGATGCTTCTTCTTCTT----AACGAA
GCA_000004655.2_ASM465v1_rm.out7414           CCTTTCT-T--GGTAGGTCTGGTTGAGCCTTCTTCATAAT-----GACAG
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           GT--TTT-C--TCGACCTGCATGAGAAGGTCTTCTTCTAT----GCAAAA
GCA_000004655.2_ASM465v1_rm.out7660           CCTTTCT-T--GGCCGGGCTCCGATTGAGCCCTTCTTACT-----GAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     CCTTTCTCG--ACATATTTGGTTGAGGCTTTTTTCTTAAT-----AAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   TTTTTTT-C--TCGACTGGTTTTGGCTAAGATTCTTCTGC----T-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   TATTTCTTG--GCCTGGCTCCGG-TTGAGCTCTTCTTAAT-------GAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   CTTTTCTC---GGTCGGTTTGGTTGAGGCTTCCTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   CTTTTCTC---GACCGGTTTGGTTGAGGCTTCTTCTTAAT----GAAAAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   ------T-T--GTGGGGAGGGGGTTGTGGCTTTTCTTAAT----TAAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   GCTTTTCTC--GGCCCAGGTTTCGGGTGCTTCTTCTTAAT----TGAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   GACTTTCTC--AGCCCTGGTTTCAGGTGTTTCTTCTTGAT----TGAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   CCTTTCTC---GGTCGGATTGGTTGAAGCTTCTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   ---------------------TT-GAGGTTTCTTCTTAATGAAAAGCTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   TTTTTCTT---AGCCAGTTTGGTTGAAGCTTCTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   ACCTTTCTC--GTCCCTGGTTTTAGATGCTTCTTCTTAGT----TGCAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   CCTTTCTT---GGCCGGTTTGGTTGAGGCTTCTTC---TT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   CCTTTCTGG--GGCCTCGGTTTCAGGTGCTTCTTCTTAAT----TGAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   CTTTTCTTG--ACTAGTTTGGTT-GATGGTTATTCTTCAT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  ---------------GTTTGGTT-GAGGATTCTTCTTTTT----AATAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  CCTCTCT-T--GGCCGGGCTCCGGTTGAGCTCTTCTTAGT-----GAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  ---------------GGTTTAAT-TGAGGTTTCTTCTTCT----TAATAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  CTTTCTTG---A-CTTGTTTGGTTAAGGCTTCCTGTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  GC------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  CTTTTCTC---GGTTGGTTTGGATGAGACTTTTTCTTTTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  GTTTTCTC---GGCTGGTTTGGTTGAGGCTTCTTCTTTGT----GAAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  CCTTTCTCA--GTTAGCTTTGGCTGAGCTTTCTTCTTAGC----ATAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  CCTTTCT-T--GGCCGGGCTCCGATTGAGCCCTTCTTACT-----GAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  CCTTTCTT---GGCTGGTTTGGTTGGGCCTTCTTCTTAAT----GAAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  GCCTTTCTC--AGCCCCAGTTTTGGGTGCCTCTTCTTAAT----TGAAAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  ACCGTTCTC--GGCCCCAGTTTCGGGTGCTTTTTCTTAGT----TGCAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  CTTTAATT---GGCCGGTTTCCATGAGGCTTCTTCTACCA----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  CCTTTCTCG--AATGAGTTGTTT-GAGGCTTCTTTTTAAT-------GAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  CCTTTCGCT--ATTAGCTTTGGTTGAGGTTTCTCTTAGCT----TGAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  ACCTTTCTC--GGCC-----------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  TCTTTCTCG--GACAGAT-TGGTTGAGACTTATTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  CTTTTCTCG--GCCGTTTTGGTT-AAGGCTTTCTCTTCTT----AGTAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  CCTTTCTC---GGCTGTTTTGGTTGAGGCTTTTTCTTCTC----AATAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  -TCTC---G--GACGTCTTTGGCTAAGGCTTCTT---A-G----TTTGAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  TTTTTCTCG--GCCAGTTTGGTT-GAGGCTTCTTCTTA-------ATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  CCTTTCT-T--GGCTGGGCTCCGGTTGAGCTCTTCTTTGT-----GAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  CTTTTCTC---GGTCAGTTTACTTGGGGCTTCTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  CCTTTCTCG--ATTAATTTGGCT-GAGAATTCTTCTTAATGGCAAGCCAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  CTTTTCTC---AGCCAGTTTGGTCGAGGCTTCTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  GCTTTCTT---GGACGGTTTGGCTGAGACTTTTTCTTCCT----AATAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  TTTTTCTT---GGATGGTTTGGTTGAGACCTTTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  -G------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  ACCATTTTC--G-GTCTAGTTTCAGGTGCTTC---TTAAT----TATAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  CCTTTCT-T--AGCCGAGCTCTGGTTGAGCTCTTCTTAGT-----GAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  -TCTT---G--GCCGGGTTTAGTCAAGACTTTTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  TCTTTCT-T--GGTCAGGCTCTGATTAAGCTCTTCTTAGT-----GAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  CTTTTGTCC--GCCGGTTTGGGT-GAGACTTCTTTTTCTT----AATAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  ----------------------------------CTTAAT----GAAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  CCTTTTT-T--------------AGCCAGTTTGGTTGAAG----CTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  CTTTTCTCG--TCCGATTTGGTT-GAGATTTCTCCTTCTT----TGTGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  CTTTACTCA--ACCGGTTTGGTT-AA-AGTTTATTCTTCT----TAACAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  GCTTTCTC---AGTCAGTTTTATTGTGGCT---TCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  CCTTTCTCG--GCTAGTTTTGGC-AATGTTTCTTCTTAGT-------GAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  CTTTTCTT---AGTCGGTTTGGTTGAGGCTTCTTCTTCTT----AATGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  CTTTTCTCG--ACCGGGCAAGG----AAGAGCTTCTTCTT----AGTGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  CCTTTTTCTCAGCTGACTGTGGCTGAG-TTTC---TTCTT----AGGAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  -GTTC---A--TGGTCTTTCTCAGCCAGTTTGGTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  CCTTTTT-T--T---------TTAACTGAATTTGGTCGAG----GTCTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------G--TCGGTTTGGTTG-AGGCTTTTTTCTTTCT----TAATGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  CCTTTCTT---GACCGGTTTGGTTGATGCTTCTTCTTCTT----AACGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  --------------GCAAGG-TTCATGGCTTTTTTTAGC-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  GGGGT---C--A--------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  CCTTTCTTG--ACTAGCTTTGTCTGTGGTTTCTTCTTAG-----CTTGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  CCTTTCTCG--ATCGGTTTTGTT-GAGACTTCTTCTTAGTGCAAAGACAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  TTCGCGTTG--GCC-AATCTGGTTGAGGTTGCTTCTTA-------ATAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  TCTTCCT-C--ACCCCAAGT-TTGACGAGTTTTTTTTTTC----TTAAT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  CATTTCTTG--ACCGGCTTTTGCTGAGGTTTCTTCTTAG-------CGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  CTTTTCT-C--GGTTGGTTTGATGGAGCCTTCTTCTTAAT-----AAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  TCTTTCTC---GGCCGATTTGGTTGAGGCTTCCTATTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  -------------------------GCTTCTTACTTTCTT----AGTGCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  -----------------CGTTTCGGGTGCCTTTTCT--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  CCTTTCTCG--TT------CGGTTAAGGCTTCTTTTTAAT-------AAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  CCTTTCTCG--ACTGATTTTGGCTAAGGTTTCTTCTTAAC----TTGAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  TATTTTTTT--TACCCCGGTTTTGTATGCTTCTTCTTAAT-----TGAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  CCTTTCTT---GGCTGGGTTGGCTGAGGCT-CTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  CTTTTCTC---ATCCAGTTTGGTTGAGGCCTGTTCTTATT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  CTTTTCTT---GGCCGCTTTGGTTGAGGCTTCTTCTAAAT----GAAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  CTTTTCTCG--ACCGGTTTGGTT-GAGGCTTCTTCTTA-------ATGGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  ATACTTATT--GGCC-----------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  CCTTTCTCG--GCTGGCTTTGGCTGAGGTTTCTTCTTAGT----GAAA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  GGTTT---T--CTCAACTTGCGTGAGAA---GGTTTTCTA----TGCAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  CCTTTCT-T--GGTAGGTCTGGTTGAGCCTTCTTCATAAT-----GACAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  ATCTCTCTC--GACTGATTTGGTTGAAATTTCTTCTTAAT----AAGAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  CTTTTCTT---GGCCAGTTTGGTTGAGGCTTTTTCTTGTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  ----------------TTTAGTT-GAGACTTCTTCTTCTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  AGAGC---C--CAAGGTT--------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  TCTTTCTCA--GCCGGCTTTGGTTAAGATTTATTATTCTT----A-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  CTTTTCT-T--AATCAGTTTGATTAAAGCTTCTTCCTCT-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  ACTTTCTTG--GCTGGCTTTGGCTGCTGAGGCTTCTTCGT----GAAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  CTTTTCTCT--TGCCCCGGTTTCGAGTGCTTCTTCTTAAT----TAAAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  AAGAC---C--AACCATTTTATTGAGGCTTTTTTCTTTTT----AATGAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  ----CCT-G--GGCC-----------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  ACTTTCT-C--AACTGGTGTAGA---TGAGGCTTCTTGAT----AAAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  CTTTTCTC---GGCCAGTTTGGTTAAGGCTTCTTCTAAAT----GAAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  CATTTCT-C--------------AGCTGGTTCTTCTCAAC----CAAAAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  TCTTACTTG--GTTAGCTTTAGCTGAGGTTTATTCTTAGC----TTCAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  -GTTC---G--TGGCTTTTCTTAGCCAGTTTGGTTAAGAC----TCCT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  CCTTTAT-T--GGCCGGGCTCCGGTTGAGCTCTTCTTAGT-----GAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  CACATGG-T--------------------TTTGACTAAAG----TTTCTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  TTTTTCTTG--GCT------------GGATTTGGATTAGT-----GAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  CCTTTCTC---GGCCAGTTTGGTTGAGGCTTCTTCTTAAT----GAAAA-

GCA_000004655.2_ASM465v1_rm.out126            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out180            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out328            ATACCGTGTGGACGGTCTCTCTCTTTTCTCCACCGGCCGAGTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out372            AAGTCGT------GAGGGCGGTCATTCCCCCGCTGGTCGAGTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out373            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out391            CC---AT------GGGGCAGTCATTC-CCGCGCCAGTCGAGTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out395            AACCTGT------GGGGGTGTCCCCCACCGGTCGAGTTTCTTTT------
GCA_000004655.2_ASM465v1_rm.out396            AACCTGT------GGGGGTGTCCCCCACCGGTCGAGTTTTTTTT------
GCA_000004655.2_ASM465v1_rm.out561            AAGTCGTGGGGAC------AGTAATTCCCCA-CCGGTCGAGTTTTTCT--
GCA_000004655.2_ASM465v1_rm.out633            ACCTC--------AGGGGAAGTCT-TTCCCCTGGGGGCCGAGTTCTTTT-
GCA_000004655.2_ASM465v1_rm.out662            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out718            AAGCTGT------GAACATGGTCTTTCCCCAACTGGTCGAGTATTTTTT-
GCA_000004655.2_ASM465v1_rm.out818            GGCCCATGGGGGC------AGTCATTCCCCCACTGGTTGAGTTTTTTT--
GCA_000004655.2_ASM465v1_rm.out838            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out884            ACCTTGTGGCCTCAGGGGAGATCT-TTCCCCTTGGGGCTGAGTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out910            ACCTC--------AGGGGAGATCT-TTCCCCTTGGGGCCAAATTTTTT--
GCA_000004655.2_ASM465v1_rm.out1025           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1172           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1226           AGCGG--------TTGGGGTGGTCTTTCTTTTGCCGGTGGAGTTTTTTTT
GCA_000004655.2_ASM465v1_rm.out1247           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1320           AAAGCCATGATGT------GGTAACTCCCCGTCAGTTGAGTTTTTTT---
GCA_000004655.2_ASM465v1_rm.out1324           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1437           AAGCC------GAGGAACG-GTCATTC---CCGCCAGTCAAGTTTTTTTT
GCA_000004655.2_ASM465v1_rm.out1649           AAGTCTTGGGGAC------AGACATGTCCTTGCCGGTTAAGTTATTTT--
GCA_000004655.2_ASM465v1_rm.out1679           CCATC--------GGACAC--TTATTTTCTCACTGGTC-AAGTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out1680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1774           AAGCTGT------GGGGGCGGTCCTTCCCCCACCAATCAAGTTTTTT---
GCA_000004655.2_ASM465v1_rm.out1790           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1954           AAGCTAT------GCGGGTAGTCTTTCCC---------------------
GCA_000004655.2_ASM465v1_rm.out1969           AAGCCGTGGGGGT------GGTCATTCCCCCGCTGGTCGACATTTTCTTT
GCA_000004655.2_ASM465v1_rm.out1993           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2028           ACCAT--------GGGGGGCAATCTTTCCCCCACCAGCCAAGTTTTTT--
GCA_000004655.2_ASM465v1_rm.out2082           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2084           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2085           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2090           AAAGACT------TGGGGAAAGTCATTCACTCATTCCCCTGTCGGTTGTG
GCA_000004655.2_ASM465v1_rm.out2099           ---TCAGGTCAGCAGGTGTGATCTTTCCCTGCAAGTTGAGTTTTT-TTT-
GCA_000004655.2_ASM465v1_rm.out2177           AAGCTGTGGGGAC------GGTCATCCCCCCGCCAGTAGAGGTTTTCTT-
GCA_000004655.2_ASM465v1_rm.out2178           AAGCTGT------GGGGACGGTCATCCCCCCGCCAGTAGAGGTTTTCTT-
GCA_000004655.2_ASM465v1_rm.out2191           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2218           AAGTCGT------GGGGTGGTCTTTCCT-CCACCGGTCAAGTTTTTT---
GCA_000004655.2_ASM465v1_rm.out2246           GGGTGGT------CATGCCTCCA---------CTGGTCGAGTTTTTTT--
GCA_000004655.2_ASM465v1_rm.out2310           AAGCTGT------GGGGTGATCATTTGCCCACCTATTAAGTT--------
GCA_000004655.2_ASM465v1_rm.out2311           AAGCTGT------GGGGGCGGTCATTCGTCCACCAATCGAGTT-------
GCA_000004655.2_ASM465v1_rm.out2315           AAGCTGT------GGGGGCGGTCATTCGCCCACCAATCGAGTT-------
GCA_000004655.2_ASM465v1_rm.out2388           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2430           AC----------CTTGGGAGGTCT-TTCCCTTTGGGGCCAAGTTCGTTTT
GCA_000004655.2_ASM465v1_rm.out2502           ACCAT--------GAGTGTGGTCATTCCCCTACTGGTCATTTTTTTTT--
GCA_000004655.2_ASM465v1_rm.out2507           AAGTCGT------GGGAGTGGTTTTTCCTTCACCGGTTAAGTTGTTTTT-
GCA_000004655.2_ASM465v1_rm.out2649           CTTA---------TT-----------------------------------
GCA_000004655.2_ASM465v1_rm.out2658           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2710           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2711           ATGCCGTGTGGGT------GGCTATTTACCCGGCGGTCGAGTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out2738           CCATG----------GGGACGTCCATTCTCGCGTCGGTCAAGTGTTTTTT
GCA_000004655.2_ASM465v1_rm.out2793           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2794           AT------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2822           AAACCGTGGGGGT------AGTCATTCCTCCACTGATCTAATTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out2823           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2851           TACTG--------TGGGGGCAGTCTTTCCCCTACCGGCCAAGTTTTTTTT
GCA_000004655.2_ASM465v1_rm.out2853           AAAGCCATGGGGT------GGTCATTTCTCCGTTGGTCGAGTTTATTT--
GCA_000004655.2_ASM465v1_rm.out2861           AAGCCGT------GGGGACAGTCATTCCCCTGCCGGTCTAGTTCTTTTT-
GCA_000004655.2_ASM465v1_rm.out2960           AAGCCGTGGAGGG------GTT--TTTCCTTGCTGATCAAGTTTTTCTT-
GCA_000004655.2_ASM465v1_rm.out2961           ATGG---------GGGAGTGGATCTGCAT---------------------
GCA_000004655.2_ASM465v1_rm.out2982           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3062           ATGCCGTGGGAGC------GGTCTTTCCCCCACTGGTCGATTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out3162           AG-CCGT------GGGGGCGGTCTTTTCCCTGTCGTTCGAGTTTTTT---
GCA_000004655.2_ASM465v1_rm.out3207           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3276           CTT-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3315           AAAGCCGTGGGGC------GGTAATTCCCTAGTGCGTCGAGTTCTTGTT-
GCA_000004655.2_ASM465v1_rm.out3316           AAAGCCGTGGGGC------GGTAATTCCCTAGTGCGTCGAGTTCTTGTT-
GCA_000004655.2_ASM465v1_rm.out3338           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3461           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3530           --ACCAT------GGGGGCTGTCTTTCCCTCGCCGGTCGAGT--------
GCA_000004655.2_ASM465v1_rm.out3540           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3549           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3574           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3582           AGCAT--------AATGGAGATCCTTCCCCCACCGGTCGAGTTCT-TTT-
GCA_000004655.2_ASM465v1_rm.out3596           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3598           AAGATGAGGGGGC------GGTCTTTCCCCCGCCGGCCGAGTTTTGTTT-
GCA_000004655.2_ASM465v1_rm.out3679           ---GCATGGGGACAGTCTTTCCCTTTCCCTCACCAGTTGAGTTTT-TT--
GCA_000004655.2_ASM465v1_rm.out3681           ---GCATGGGGACAGTCTTTCCCTTTCCCTCACCAGTTGAGTTTT-TT--
GCA_000004655.2_ASM465v1_rm.out3779           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3838           AAGTCATGTGGGC------GGTCTTTCCCCCGTCGGTCGAGTATTATTT-
GCA_000004655.2_ASM465v1_rm.out3988           ATGCCGTGGGGGT------GGTCTTTCCCCCGTCAGTCGAGTTCTTT---
GCA_000004655.2_ASM465v1_rm.out4037           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4038           CACG----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4039           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4041           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4043           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4141           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4184           AAGCCAT------AGGGGTGGTCATTCCCCCGCCACCGCCAGTCGAGGTG
GCA_000004655.2_ASM465v1_rm.out4190           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4193           ACCGT--------GGGGGTTGTCTTTCCTCCCACCCGTCAAGTTTTT---
GCA_000004655.2_ASM465v1_rm.out4217           ACCTG--------GGAAGAGGTCT-TTCCCCTTGGGACCGAGTTTT----
GCA_000004655.2_ASM465v1_rm.out4331           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4429           AAGCTGTGGGGGT--GGGGTCTTTTTTTCCCGCCGATTGAGTTATT----
GCA_000004655.2_ASM465v1_rm.out4474           AGCCA--------TGGTGCGATCTGTTCCCGGTTGATT-AAGTATTTTT-
GCA_000004655.2_ASM465v1_rm.out4537           ATCT---------AGGGGC-------------------------------
GCA_000004655.2_ASM465v1_rm.out4544           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4603           ACCAT--------GGGGGTGGTTTTTCCC---------------------
GCA_000004655.2_ASM465v1_rm.out4680           AAGCAGT------GGGGGCGGTCCTTCCCCCGCTGGTTGAAATTTTTTT-
GCA_000004655.2_ASM465v1_rm.out4711           AAGTCGT------GGGGGTGGTCTTTCCCCCACCAGTCGAGTTTTTTT--
GCA_000004655.2_ASM465v1_rm.out4856           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5024           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5043           AAGCCAC------GGGGACGGTCATTCCCCCGCCGGTCGAGTTTTTTT--
GCA_000004655.2_ASM465v1_rm.out5202           --GCCGT------GAGGGCGGTCATTCCCCTGCCGGTCGAATTTTTTT--
GCA_000004655.2_ASM465v1_rm.out5208           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5228           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5229           AAGCCATGGGGGC------GGTCATTCCCCCGCTGATCGAGTTTTTTCT-
GCA_000004655.2_ASM465v1_rm.out5245           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5457           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5480           AGTCATG------GGAGCCAGTTTTTCCCCTGCAAATTCTTTTT------
GCA_000004655.2_ASM465v1_rm.out5492           ACGCCCA------GGGGCTGTCTTACCCCCCCATAGGTCGATTCTTTTT-
GCA_000004655.2_ASM465v1_rm.out5541           CCTG---------TGGGGATGATTTTTTTTCTGTTGGTTGAGTTTTTTTT
GCA_000004655.2_ASM465v1_rm.out5599           AAACCGTAGGGAT------AG-----------------------------
GCA_000004655.2_ASM465v1_rm.out5606           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5711           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5712           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5720           G--CCGT------GGGGGTGGTCTTTCCCCCACCGATCAAGTTTCTTTT-
GCA_000004655.2_ASM465v1_rm.out5814           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5822           AA------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5838           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5849           GCCAT--------CGGTGCTGTCTTTTCCTTACTGGTCCAGTTTT-TCTT
GCA_000004655.2_ASM465v1_rm.out5859           GC---CA------TAGAAGCGGTCATTCGCCCACGGTCGAGTTTTTTT--
GCA_000004655.2_ASM465v1_rm.out5860           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5861           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5885           CTGT---------AG-GAACGATCTTTCTC--------------------
GCA_000004655.2_ASM465v1_rm.out5959           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6058           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6090           CTT-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6198           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6199           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6200           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6211           GCTGT--------GGGGACT-GTTTTTCCCCGCCGGTCAAGTTTT-T---
GCA_000004655.2_ASM465v1_rm.out6243           --GCCGT------GGGGCGGTCTTTTCCCAGTCAGTTGA-GTTCTTTTT-
GCA_000004655.2_ASM465v1_rm.out6327           AAGTCAT------TTGTTGGCCTCT-------------------------
GCA_000004655.2_ASM465v1_rm.out6354           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6420           AAGTCGTGCCGAC------GGTCATTACCCCACCGGTCATGTTATTTT--
GCA_000004655.2_ASM465v1_rm.out6421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6422           AAGTCGTGCCGAC------GGTCATTACCCCACCGGTCATATTATTTT--
GCA_000004655.2_ASM465v1_rm.out6423           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6440           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6447           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6448           AATCCGTGGAGAC------AGTCATTCCCCTACCGCTCGATTTTTTT---
GCA_000004655.2_ASM465v1_rm.out6525           ACTGT--------GGGGGT-GGCCTTTCCCCCACTGTCCGTCTTTATTTT
GCA_000004655.2_ASM465v1_rm.out6526           ACTGT--------GGGGGT-GGCCTTTCCCCCACTGTCCGTCTTTATTTT
GCA_000004655.2_ASM465v1_rm.out6643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6699           AAGTCAT------GGGGGGACTTTCCCC----------------------
GCA_000004655.2_ASM465v1_rm.out6854           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6997           --ACCGT------GAGGGTGGTTATTCTCCTACTGGTCGAGTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out7043           AAGTTGT------GTAGACGGTCATTTCCCATTGGTCATGTTTTTT----
GCA_000004655.2_ASM465v1_rm.out7044           AAGTTGT------GTAGACGGTCATTTCCCATTGGTCATGTTTTTT----
GCA_000004655.2_ASM465v1_rm.out7091           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7163           AACCGTG-------GGGACGGTCTTTCCCTCATCGGTCGAGTTTT-----
GCA_000004655.2_ASM465v1_rm.out7236           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7318           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7359           TACCT--------CGGGGGAGGTTTTTCCCTTGAGACTGAGTTTTT----
GCA_000004655.2_ASM465v1_rm.out7378           ACCTC--------AGGGGAGGTCT-TTCCCCTTGGGGCCAAGTTTTT---
GCA_000004655.2_ASM465v1_rm.out7392           ACCTC--------TGGGGAGGTCT-TTCCCCTTGGGGCTGAGTTCTTTTT
GCA_000004655.2_ASM465v1_rm.out7396           AAATTGT------GGGGTGGTCATTTACCCGTCATTCGA-GTTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out7406           AAGCTGTGGGGGC------GGTCTTTCCCCCACCGTCTGAGGGGTTATTT
GCA_000004655.2_ASM465v1_rm.out7407           AAATC------ATAAATAC-AGTATTTTCCATGTCAGATAAGTTTTTTT-
GCA_000004655.2_ASM465v1_rm.out7414           ACCAC--------AAGGCG--GTCTTCCTTCTATAAGTCGAGTTTTT---
GCA_000004655.2_ASM465v1_rm.out7421           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7513           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7539           TGCT---------CGGGGGCTGTATTACCCCTGCAGGTCGAGTATTTTTT
GCA_000004655.2_ASM465v1_rm.out7660           ACAGT--------GGGGTCGGTCTTTCCGCCACCGGTCAAGATT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     GTTGT--------GATGTGTTCTTTTGCCCGTATGTTGAGATT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   ATACCGTGTGGACGGTCTCTCTCTTTTCTCCACCGGCCGAGTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   AAGTCGT------GAGGGCGGTCATTCCCCCGCTGGTCGAGTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   CC---AT------GGGGCAGTCATTC-CCGCGCCAGTCGAGTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   GTCGT--------GGGGAC-AGTAATTCCCCACCGGTCGAGTTTTT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   ACCTC--------AGGGGAAGTCT-TTCCCCTGGGGGCCGAGTTCTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   ACCTG--------GGAAGAGGTCT-TTCCCCTTGGGACCGAGTTTT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   AAGCTGT------GAACATGGTCTTTCCCCAACTGGTCGAGTATTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   GGCCCATGGGGGC------AGTCATTCCCCCACTGGTTGAGTTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   AAGGTGT------GTGTGTGTGGGGGGGGGGGGGCATTCCCCCAGTCAAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   ACCTTGTGGCCTCAGGGGAGATCT-TTCCCCTTGGGGCTGAGTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   AAGTCGT------GGGGGTGGTCTTTCCCCCACCAGTCGAGTTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   ACCTC--------AGGGGAGATCT-TTCCCCTTGGGGCCGAATTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   AAGTCGTGCCGAC------GGTCATTACCCCACCGGTCATGTTATTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  AATCCGTGGAGAC------AGTCATTCGCCTACCGCTCGATTTTTT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  ACTGT--------GGGGGT-GGCCTTTCCCCCACTGTCCGTCTTTATTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  AAAGCCATGATGT------GGTAACTCCCCGTCAGTTGAGTTTTTT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  AAGTCGT------GGGGTGGTCTTTCCT-CCACCGGTCAAGTTTTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  AAGTTGT------GTAGACGGTCATTTCCCATTGGTCATGATTTTT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  --ACCGT------GAGGGTGGTTATTCTCCTACTGGTCGAGTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  AACCGTG-------GGGACGGTCTTTCCCTCATCGGTCGAGTTTT-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  ACAGT--------GGGGTCGGTCTTTCCTCCACCGGTCAAGATT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  --ACCAT------GGGGGCTGTCTTTCCCTCGCCGGTCGAGT--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  ACCTC--------AGGGGAGGTCT-TTCCCCTTGGGGCCAAGTTTTTCT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  ACCTC--------TGGGGAGGTCT-TTCCCCTTGGGGCTGAGTTCTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  AAATTGT------GGGGTAGTCATTTACCCGTCATTCAA-GTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  AAGCTGTGGGGGC------GGTCTTTCCCCCACCGTCCGAG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  AGCGG--------TTGGGGTGGTCTTTCTTTTGCCGGTGGAGTTTTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  AAGCC------GAGGAACG-GTCATTC---CCGCCAGTCAAGTTTTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  AAGTCTTGGGGAC------AGACATGTCCTTGCCGGTTAAGTTATTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  AAGCTGT------GGGGGCGGTCCTTCCCCCACCAATCAAGTTTTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  AAGCTAT------GCGGGTAGTCTTTCCC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  AAGCCGTGGGGGT------GGCCATTCCCCCGCTGGTCGACATTTTCTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  ACCAT--------GGGGGGCAATCTTTCCCCCACCAGCCAAGTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  AAAGACT------TGGGGAAAGTCATTCACTCATTCCCCTGTCGGTTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  ---GCAGGTCAGCAGGTGTGATCTTTCCCTGCTAGTTGAGTTTTT-TTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  AAGCTGT------GGGGACGGTCATCCCCCTGCCAGTAGAGGTTTTCTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  AAGCTGT------GGGGTGGTCATTTGCCCACCTATTAAGTT--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  AAGCTGT------GGGGGCGGTCATTCGCCCACCAATCGAGTT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  AC----------CTTGGGAGGTCT-TTCCCTTTGGGGCCAAGTTCGTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  ACCAT--------GAGTGTGGTCATTCCCCTACTGGTCTTTTTTTT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  AAGTCGT------GGGAGTGGTTTTTCCTTCACCGGTTAAGTTGTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  ACCAT--------GGGGGTGGTTTTTCCC---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  ATGCCGTGTGGGT------GGCTATTTACCCGGCGGTCGAGTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  CCATG----------GGGACGTCCATTCTCGCGTCGGTCAAGTGTTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  CTTA---------TT-----------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  AT------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  AAACCGTGGGGGT------AGTCATTCCTCCACTGATCTAATTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  AAAGCCGTGGGGT------GGTCATTTCTCCGTTGGTCAAGTTTATTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  AAGCTGT------GGGGACAGTCATTCCCCTGCCGGTCTAGTTCTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  AAGCCGTGGAGGG------GTT--TTTCCTTGCTGATCGAGTTTTTCTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  ATGG---------GGGAGCGGATCTGCGT---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  GGGTGGT------CATGCCTCCA---------CTGGTCGAGTTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  ATGCCGTGGGAGC------GGTCTTTCCCCCACTGGTCGATTTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  AG-CCGT------GGGGGCGGTCTTTTCCCTGTCGTTCGAGTTTTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  AAGTCAT------GGGGGGACTTTCCCC----------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  CTT-----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  AAAGCCGTGGGGC------GGTAATTCCCTAGTGCGTCGAGTTCTTGTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  AAATC------ATAAATAC-AGTATTTTCCGTGTCAGATAAGTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  AAGATGAGGGGGC------GGTCTTTCCCCCGCCGGCCGAGTTTTGTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  ---GCATGGGGACAGTCTTTCCCTTTCCCTCACCAGTTGAGTTTT-TT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  AAGTCATGTGGGC------GGTCTTTCCTCCGTCGGTCGAGTATTATTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  ATGCCGTGGGGGT------GGTCTTTCCCCCGTCAGTCGAGTTCTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  CCATC--------GGACAC--TTATTTTCTCACTGGTC-AAGTTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  AAGCCAT------AGGGGTGGTCATTCCCCCGCC----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  AAACCGTGGGGGT------TGTCTTTCCTCCCACCGGTCAAGTTTTT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  AAGCTGTGGGGGT--GGGGTCTTTTTTTCCCGCCGATTGAGTTATT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  AGCCA--------TGGTGCGATCTGTTCCCGGTTGATT-AAGTATTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  TATCT--------AGGGGC-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  AAGCAGT------GGGGGCGGTCCTTCCCCCGCTGGTTGAGATTTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  AAGCCAC------GGGGACGGTCATTCCCCCGCCGGTCGAGTTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  --GCCGT------GAGGGCGGTCATTCCCCTGCCGGTCGAATTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  AAGCCATGGGGGC------GGTCATTCCCCCGCTGATCGAGTTTTTTCT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  AGTCATG------GGAGCCAGTTTTTCCCCTGCAAATTCTTTTT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  ACGCCCA------GGGGCTGTCTTACCCCCCCATAGGTCGATTCTTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  ATCAC--------AAGGCG--GTCTTCCTTCTATAAGTCGAGTTTTTATT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  CCTG---------TGGGGATGATTTTTTTTCTGTTGGTTGAGTTTTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  AACCTGT------GGGGGTGTCCCCCACCGGTCGAGTTTCTTTT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  AAACCGTAGGGAT------AG-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  G--CCGT------GGGGGTGGTCTTTCCCCCACCGATCAAGTTTCTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  AA------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  GCCAT--------CGGTGCTGTCATTTCCTTACTGGTCCAGTTTT-TCTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  GC---CA------TAGAAGCGGTCATTCGCCCACGGTCGAGTTTTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  CTGT---------AG-GAACGATCTTTCTC--------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  AGTCGTG------GGGGACAGTCTTTCCCCCTCCGATCGAGTTCTTTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  TACTG--------TGGGGGCAGTCTTTCCCCTACCGGCCAAGTTTTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  CTT-----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  GCTGT--------GGGGACT-GTTTTTCCCCGCCGGTCAAGTTTT-T---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  --GCCGT------GGGGCGGTCTTTTCCCAGTCAGTTGA-GTTCTTTTT-

GCA_000004655.2_ASM465v1_rm.out126            --------
GCA_000004655.2_ASM465v1_rm.out180            --------
GCA_000004655.2_ASM465v1_rm.out328            --------
GCA_000004655.2_ASM465v1_rm.out372            --------
GCA_000004655.2_ASM465v1_rm.out373            --------
GCA_000004655.2_ASM465v1_rm.out391            --------
GCA_000004655.2_ASM465v1_rm.out395            --------
GCA_000004655.2_ASM465v1_rm.out396            --------
GCA_000004655.2_ASM465v1_rm.out561            --------
GCA_000004655.2_ASM465v1_rm.out633            --------
GCA_000004655.2_ASM465v1_rm.out662            --------
GCA_000004655.2_ASM465v1_rm.out718            --------
GCA_000004655.2_ASM465v1_rm.out818            --------
GCA_000004655.2_ASM465v1_rm.out838            --------
GCA_000004655.2_ASM465v1_rm.out884            --------
GCA_000004655.2_ASM465v1_rm.out910            --------
GCA_000004655.2_ASM465v1_rm.out1025           --------
GCA_000004655.2_ASM465v1_rm.out1172           --------
GCA_000004655.2_ASM465v1_rm.out1226           --------
GCA_000004655.2_ASM465v1_rm.out1247           --------
GCA_000004655.2_ASM465v1_rm.out1320           --------
GCA_000004655.2_ASM465v1_rm.out1324           --------
GCA_000004655.2_ASM465v1_rm.out1437           --------
GCA_000004655.2_ASM465v1_rm.out1649           --------
GCA_000004655.2_ASM465v1_rm.out1679           --------
GCA_000004655.2_ASM465v1_rm.out1680           --------
GCA_000004655.2_ASM465v1_rm.out1774           --------
GCA_000004655.2_ASM465v1_rm.out1790           --------
GCA_000004655.2_ASM465v1_rm.out1954           --------
GCA_000004655.2_ASM465v1_rm.out1969           --------
GCA_000004655.2_ASM465v1_rm.out1993           --------
GCA_000004655.2_ASM465v1_rm.out2028           --------
GCA_000004655.2_ASM465v1_rm.out2082           --------
GCA_000004655.2_ASM465v1_rm.out2084           --------
GCA_000004655.2_ASM465v1_rm.out2085           --------
GCA_000004655.2_ASM465v1_rm.out2090           TT------
GCA_000004655.2_ASM465v1_rm.out2099           --------
GCA_000004655.2_ASM465v1_rm.out2177           --------
GCA_000004655.2_ASM465v1_rm.out2178           --------
GCA_000004655.2_ASM465v1_rm.out2191           --------
GCA_000004655.2_ASM465v1_rm.out2218           --------
GCA_000004655.2_ASM465v1_rm.out2246           --------
GCA_000004655.2_ASM465v1_rm.out2310           --------
GCA_000004655.2_ASM465v1_rm.out2311           --------
GCA_000004655.2_ASM465v1_rm.out2315           --------
GCA_000004655.2_ASM465v1_rm.out2388           --------
GCA_000004655.2_ASM465v1_rm.out2430           TT------
GCA_000004655.2_ASM465v1_rm.out2502           --------
GCA_000004655.2_ASM465v1_rm.out2507           --------
GCA_000004655.2_ASM465v1_rm.out2649           --------
GCA_000004655.2_ASM465v1_rm.out2658           --------
GCA_000004655.2_ASM465v1_rm.out2710           --------
GCA_000004655.2_ASM465v1_rm.out2711           --------
GCA_000004655.2_ASM465v1_rm.out2738           --------
GCA_000004655.2_ASM465v1_rm.out2793           --------
GCA_000004655.2_ASM465v1_rm.out2794           --------
GCA_000004655.2_ASM465v1_rm.out2822           --------
GCA_000004655.2_ASM465v1_rm.out2823           --------
GCA_000004655.2_ASM465v1_rm.out2851           --------
GCA_000004655.2_ASM465v1_rm.out2853           --------
GCA_000004655.2_ASM465v1_rm.out2861           --------
GCA_000004655.2_ASM465v1_rm.out2960           --------
GCA_000004655.2_ASM465v1_rm.out2961           --------
GCA_000004655.2_ASM465v1_rm.out2982           --------
GCA_000004655.2_ASM465v1_rm.out3062           --------
GCA_000004655.2_ASM465v1_rm.out3162           --------
GCA_000004655.2_ASM465v1_rm.out3207           --------
GCA_000004655.2_ASM465v1_rm.out3276           --------
GCA_000004655.2_ASM465v1_rm.out3315           --------
GCA_000004655.2_ASM465v1_rm.out3316           --------
GCA_000004655.2_ASM465v1_rm.out3338           --------
GCA_000004655.2_ASM465v1_rm.out3461           --------
GCA_000004655.2_ASM465v1_rm.out3530           --------
GCA_000004655.2_ASM465v1_rm.out3540           --------
GCA_000004655.2_ASM465v1_rm.out3549           --------
GCA_000004655.2_ASM465v1_rm.out3574           --------
GCA_000004655.2_ASM465v1_rm.out3582           --------
GCA_000004655.2_ASM465v1_rm.out3596           --------
GCA_000004655.2_ASM465v1_rm.out3598           --------
GCA_000004655.2_ASM465v1_rm.out3679           --------
GCA_000004655.2_ASM465v1_rm.out3681           --------
GCA_000004655.2_ASM465v1_rm.out3779           --------
GCA_000004655.2_ASM465v1_rm.out3838           --------
GCA_000004655.2_ASM465v1_rm.out3988           --------
GCA_000004655.2_ASM465v1_rm.out4037           --------
GCA_000004655.2_ASM465v1_rm.out4038           --------
GCA_000004655.2_ASM465v1_rm.out4039           --------
GCA_000004655.2_ASM465v1_rm.out4041           --------
GCA_000004655.2_ASM465v1_rm.out4043           --------
GCA_000004655.2_ASM465v1_rm.out4141           --------
GCA_000004655.2_ASM465v1_rm.out4184           TTTTTTTT
GCA_000004655.2_ASM465v1_rm.out4190           --------
GCA_000004655.2_ASM465v1_rm.out4193           --------
GCA_000004655.2_ASM465v1_rm.out4217           --------
GCA_000004655.2_ASM465v1_rm.out4331           --------
GCA_000004655.2_ASM465v1_rm.out4429           --------
GCA_000004655.2_ASM465v1_rm.out4474           --------
GCA_000004655.2_ASM465v1_rm.out4537           --------
GCA_000004655.2_ASM465v1_rm.out4544           --------
GCA_000004655.2_ASM465v1_rm.out4603           --------
GCA_000004655.2_ASM465v1_rm.out4680           --------
GCA_000004655.2_ASM465v1_rm.out4711           --------
GCA_000004655.2_ASM465v1_rm.out4856           --------
GCA_000004655.2_ASM465v1_rm.out5024           --------
GCA_000004655.2_ASM465v1_rm.out5043           --------
GCA_000004655.2_ASM465v1_rm.out5202           --------
GCA_000004655.2_ASM465v1_rm.out5208           --------
GCA_000004655.2_ASM465v1_rm.out5228           --------
GCA_000004655.2_ASM465v1_rm.out5229           --------
GCA_000004655.2_ASM465v1_rm.out5245           --------
GCA_000004655.2_ASM465v1_rm.out5457           --------
GCA_000004655.2_ASM465v1_rm.out5480           --------
GCA_000004655.2_ASM465v1_rm.out5492           --------
GCA_000004655.2_ASM465v1_rm.out5541           --------
GCA_000004655.2_ASM465v1_rm.out5599           --------
GCA_000004655.2_ASM465v1_rm.out5606           --------
GCA_000004655.2_ASM465v1_rm.out5711           --------
GCA_000004655.2_ASM465v1_rm.out5712           --------
GCA_000004655.2_ASM465v1_rm.out5720           --------
GCA_000004655.2_ASM465v1_rm.out5814           --------
GCA_000004655.2_ASM465v1_rm.out5822           --------
GCA_000004655.2_ASM465v1_rm.out5838           --------
GCA_000004655.2_ASM465v1_rm.out5849           --------
GCA_000004655.2_ASM465v1_rm.out5859           --------
GCA_000004655.2_ASM465v1_rm.out5860           --------
GCA_000004655.2_ASM465v1_rm.out5861           --------
GCA_000004655.2_ASM465v1_rm.out5885           --------
GCA_000004655.2_ASM465v1_rm.out5959           --------
GCA_000004655.2_ASM465v1_rm.out6058           --------
GCA_000004655.2_ASM465v1_rm.out6090           --------
GCA_000004655.2_ASM465v1_rm.out6091           --------
GCA_000004655.2_ASM465v1_rm.out6198           --------
GCA_000004655.2_ASM465v1_rm.out6199           --------
GCA_000004655.2_ASM465v1_rm.out6200           --------
GCA_000004655.2_ASM465v1_rm.out6211           --------
GCA_000004655.2_ASM465v1_rm.out6243           --------
GCA_000004655.2_ASM465v1_rm.out6327           --------
GCA_000004655.2_ASM465v1_rm.out6354           --------
GCA_000004655.2_ASM465v1_rm.out6420           --------
GCA_000004655.2_ASM465v1_rm.out6421           --------
GCA_000004655.2_ASM465v1_rm.out6422           --------
GCA_000004655.2_ASM465v1_rm.out6423           --------
GCA_000004655.2_ASM465v1_rm.out6440           --------
GCA_000004655.2_ASM465v1_rm.out6447           --------
GCA_000004655.2_ASM465v1_rm.out6448           --------
GCA_000004655.2_ASM465v1_rm.out6525           --------
GCA_000004655.2_ASM465v1_rm.out6526           --------
GCA_000004655.2_ASM465v1_rm.out6643           --------
GCA_000004655.2_ASM465v1_rm.out6699           --------
GCA_000004655.2_ASM465v1_rm.out6854           --------
GCA_000004655.2_ASM465v1_rm.out6997           --------
GCA_000004655.2_ASM465v1_rm.out7043           --------
GCA_000004655.2_ASM465v1_rm.out7044           --------
GCA_000004655.2_ASM465v1_rm.out7091           --------
GCA_000004655.2_ASM465v1_rm.out7163           --------
GCA_000004655.2_ASM465v1_rm.out7236           --------
GCA_000004655.2_ASM465v1_rm.out7276           --------
GCA_000004655.2_ASM465v1_rm.out7318           --------
GCA_000004655.2_ASM465v1_rm.out7359           --------
GCA_000004655.2_ASM465v1_rm.out7378           --------
GCA_000004655.2_ASM465v1_rm.out7392           --------
GCA_000004655.2_ASM465v1_rm.out7396           --------
GCA_000004655.2_ASM465v1_rm.out7406           TT------
GCA_000004655.2_ASM465v1_rm.out7407           --------
GCA_000004655.2_ASM465v1_rm.out7414           --------
GCA_000004655.2_ASM465v1_rm.out7421           --------
GCA_000004655.2_ASM465v1_rm.out7513           --------
GCA_000004655.2_ASM465v1_rm.out7539           --------
GCA_000004655.2_ASM465v1_rm.out7660           --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1     --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out128   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out156   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out157   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out197   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out320   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out340   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out342   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out392   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out482   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out551   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out559   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out586   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out642   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out753   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out769   TTTTTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out813   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out831   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out854   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out910   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out989   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out990   --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1003  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1012  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1013  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1039  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1073  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1148  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1185  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1390  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1429  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1537  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1618  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1674  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1703  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1758  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1807  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1843  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1910  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1922  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1933  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1948  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1956  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1960  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1967  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2186  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2381  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2413  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2487  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2493  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2606  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2838  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2954  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3122  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3142  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3161  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3180  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3223  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3228  TT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3237  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3321  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3342  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3427  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3428  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3482  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3521  TT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3596  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3599  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3614  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3691  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3756  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3757  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3781  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3798  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3820  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3826  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3848  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3849  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3863  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3874  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3958  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3959  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3977  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4037  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4045  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4096  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4139  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4220  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4244  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4279  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4300  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4410  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4424  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4479  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4501  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4523  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4525  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4595  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4693  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4745  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4799  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4875  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4905  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4964  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4965  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5070  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5073  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5076  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5233  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5310  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5335  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5371  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5429  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5537  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5707  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5849  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5917  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5966  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6028  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6034  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6052  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6053  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6066  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6257  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6266  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6278  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6313  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6353  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6377  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6404  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6405  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6406  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6495  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6496  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6510  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6594  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6601  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6608  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6614  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6625  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6652  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6739  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6794  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6807  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6840  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6841  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6871  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6967  --------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6990  --------
//
