# STOCKHOLM 1.0

#=GS           GCA_000004655.2_ASM465v1_rm.out279 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out282 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out283 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out314 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out334 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out335 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out359 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out360 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out384 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out445 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out446 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out526 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out623 DE    SINE
#=GS           GCA_000004655.2_ASM465v1_rm.out728 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1126 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1295 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1516 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1530 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1602 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1610 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1620 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1631 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1760 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out1991 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2140 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2165 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2212 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2220 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2592 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2593 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2605 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out2897 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3002 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3174 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3194 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3391 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3393 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3398 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3404 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3408 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3517 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3545 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3564 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3565 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3599 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3651 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3678 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3680 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3753 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out3823 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4018 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4019 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4044 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4175 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4221 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4276 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4374 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4424 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4604 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4610 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4611 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4634 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4643 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4668 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4741 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4896 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out4965 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5278 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5299 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5300 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5374 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5484 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5485 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5487 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5488 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5579 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5620 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5750 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out5978 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6259 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6326 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6433 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6435 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6436 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6513 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6613 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6713 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6847 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6881 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out6908 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7151 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7152 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7153 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7154 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7170 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7171 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7230 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7376 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7390 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7410 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7411 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7425 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7471 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7473 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7474 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7499 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7506 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7507 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7613 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7679 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7680 DE    SINE
#=GS          GCA_000004655.2_ASM465v1_rm.out7685 DE    SINE
#=GS   GCA_000576065.1_Oryza_nivara_v1.0_rm.out54 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out282 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out285 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out286 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out306 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out331 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out332 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out351 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out357 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out369 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out385 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out432 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out433 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out453 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out541 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out651 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out909 DE    SINE
#=GS  GCA_000576065.1_Oryza_nivara_v1.0_rm.out937 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685 DE    SINE
#=GS GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006 DE    SINE

GCA_000004655.2_ASM465v1_rm.out279            -------GCGCTACGCGCAGGTGGCAGGAG-CCTGTGGCTTGCTCCTTGC
GCA_000004655.2_ASM465v1_rm.out282            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out314            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out334            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            ------------------------CGAGCGTAG-------------CTCG
GCA_000004655.2_ASM465v1_rm.out360            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out384            GAGACCAAGCGTTTGTTCATGTGTTTAGTGTCACCGGTGGACATGCTGCC
GCA_000004655.2_ASM465v1_rm.out445            ---GACCGCGCTTAGCGCGGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000004655.2_ASM465v1_rm.out446            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out526            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out623            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out728            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1126           -----------------------GCAAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1530           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1602           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           ----ACCGAGCGTTGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out1631           ---GACCGTGCGTAGCGCGGGTGGCAGGAGCCA-GTAGCTCGCTCTGTGC
GCA_000004655.2_ASM465v1_rm.out1760           GAGATCAAGCACTAGCTCAGGT----------------GGTGCAGGATTC
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           ---GACCGCGCTTAGCGCGGGTGGCAGGAGCCA-GTGGCTCGCTCCGTGC
GCA_000004655.2_ASM465v1_rm.out2212           ---ACCG-AGCGTTGCTCGGTTGGCTTGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out2220           ----------------------------AG-CGCAGGTGGTAGGTCGTGC
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2593           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2605           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2897           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           GAGATCGAGCATTTGTTTGGATGGTTAGCGACGCCGGTGG-GCACATTGC
GCA_000004655.2_ASM465v1_rm.out3174           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3393           GAGACCGAGCGCTTGCTCGGGTGGCAAGCGTCGCCGGTGG-GCACGCTGC
GCA_000004655.2_ASM465v1_rm.out3398           --------------GCTCAGTGGTAAATCC-TAGCAGGTGATTAGCCTAC
GCA_000004655.2_ASM465v1_rm.out3404           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3408           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3517           ---ACCA-AGCGTTGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out3545           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           ---GACCGACCGTTGCTCGGGTGGCTAGCTACGCGTGTGT-CCGGGCAGC
GCA_000004655.2_ASM465v1_rm.out3565           ---GACCGACCGTTGCTCGGGTGGCTAGCTACGCGTGTGT-CCGGGCAGC
GCA_000004655.2_ASM465v1_rm.out3599           ---GACCGTGCGTAGCGCGGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000004655.2_ASM465v1_rm.out3651           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           ---GACCGCGCTTAGCGCGGGTGGCAGGAGCCA-GTGGCTCGCTCCGTGC
GCA_000004655.2_ASM465v1_rm.out3680           ---GACCGCGCTTAGTGCGGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000004655.2_ASM465v1_rm.out3753           GAGACCGAGCACTTGCTCAGGTGGCAAGCGTCGCCGGTGGGCACCGCAGC
GCA_000004655.2_ASM465v1_rm.out3823           ---------------------------------GAGACCGAGCGAGCTTG
GCA_000004655.2_ASM465v1_rm.out4018           ------------------------------GCTGGTTGGTTCGAACCACC
GCA_000004655.2_ASM465v1_rm.out4019           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4044           ------------------------------------------------GC
GCA_000004655.2_ASM465v1_rm.out4175           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           ---ACCG-AGCGTTGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4604           ----GATCGAGCTTAGCTCGGTTGGCATGTTCGCTG--------TGGTGC
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4634           ----GAGAACCTACGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out4643           ---------------GCTCGGTTGGCATGTTCGCTG--------TGGTGC
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           --AAACCGAGCTTTGTTTGGGTGTCTAGCCTCGCTAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out4965           GAGACCGAGAGCTTGTTCGGGTGGCAAGCGTCG-CCGGTGGGCACGCTGC
GCA_000004655.2_ASM465v1_rm.out5278           ----GACTGAGCGTAGCTCGGTTGGCACATTCGCAG--------TGGAGC
GCA_000004655.2_ASM465v1_rm.out5299           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5300           ---ACCG-AGCGTTGCTCGGTTGGCTTGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out5374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5484           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           GGGACCGATATTTTACTCGGGTGGTTAGCGTCGCGGTGGGCACACTGCCT
GCA_000004655.2_ASM465v1_rm.out5487           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           GGGACCGATATTTTACTCGGGTGGTTAGCGTCGCGGTGGGCACACTGCCT
GCA_000004655.2_ASM465v1_rm.out5579           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5620           GAGACCGAGCGCTTGCTCAAGTGGCAAGCGTCGCCGGTGG-GCACGCTGC
GCA_000004655.2_ASM465v1_rm.out5750           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5978           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6259           GAGCCTGAGTGTTTGCTCAGGTGGTTAGTGTCGCCGGTGG-GCACACTAC
GCA_000004655.2_ASM465v1_rm.out6326           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6433           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           --------------GTTCAGTTGG-TACATTCTCAGTG-G-AGAG-----
GCA_000004655.2_ASM465v1_rm.out6613           ---ACCG-AGCGTTGCTAGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out6713           ---GACCGTGCGTAGCGCAGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000004655.2_ASM465v1_rm.out6847           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           ---GACCGCACGTAGCGTGGGTGGCAGGAGCTAGTGGCTC-GCTCCATGC
GCA_000004655.2_ASM465v1_rm.out7151           ---GACCGCGCATAGCGTGGGTGGCAGGAGCAAGTGGCTC-GCTTCGTGC
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7154           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7170           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           ----ACCGAGCAGTGCTCGGGTGGCTAGCGTCGCTGGTGT-GCGAGCAGT
GCA_000004655.2_ASM465v1_rm.out7376           GAGACCAAGCGCTTGCTCGGGTGGCAAGCGTC------------------
GCA_000004655.2_ASM465v1_rm.out7390           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7410           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7411           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7425           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           ----ACCGAGCGTTGCGCGGTTGGCCAGCGTCGCCACGTGAGCGAGCAGC
GCA_000004655.2_ASM465v1_rm.out7499           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7506           ---GACCGAGCGTAGCTCGGTTGGCACGTTCGT-AGTGGAGCGAACGGCC
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           ---ACCG-AGCGTTGCTCGGTTGGCTAGCGTCGCTAGGTGAGCCAGCAGC
GCA_000004655.2_ASM465v1_rm.out7679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7680           ---GACTGAGCACAGCTCAGTTGGTACGTTCTT-AGTGGATAGAACGACC
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   --------------GCTCAGGTGGCAGGAG-CCTGTGGCTTGCTCCTTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   -----------------------------CGAGCGT--------AGCTCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   ---GACCGCGCTACGCGCGGGTGGCAGGAGCCA-GTGGCTCGCTCCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   ---GACCGCGCTTAGCGCGGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   ---GACCGAGCGTAGCTCGGTTGGCACGTTCGC-AGTGGAGCGAACGGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   --AAACCGAGCTTTGTTTGGGTGTCTAGCCTCGCTAGGTGAGCGAGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  GAGACCGAGCGCTTGCTCGGGTG------------GCAAG-CGTCGCTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  --------------GCTCAGTTGG-TACGTTCTCAGTG-G-AGAG-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  ----ACCGAGCGTTGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  ----------------------------AG-CGCAGGTGGTAGGTCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  ---GACCGGGCGTAGCGCAGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  ---ACCG-AGCGTTGCTCGGTTGGCTTGCGTCGCCAGGTGAGCGAGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  ---GACCGCACGTAGCGTGGGTGGCAGGAGCTAGTGGCTC-GCTCCATGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  ---GACCGCGCATAGCGTGGGTGGCAGGAGCCAGTGGCTC-GCTTTGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  GAGACCAAGCGCTTGCTCGGGTGGCAAGCGTC------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  ------------------------------------------CATGCTAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  -----------------------GCAAGCGTCGCCAGGTGAGCAAGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  ---GACCGTGCGTAGCGCGGGTGGCAGGAGCCA-GTAGCTCGCTCTGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  GAGATCAAGCACTAGCTCAGGT----------------GGTGCAGGATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  ---GACCGCGCTTAGCGCGGGTGGCAGGAGCCA-GTGGCTCGCTCCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  GAGATCGAGCATTTGTTTGGATGGTTAGCGTCGCCGGTGGGCACATTGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  -----CGAGCCGTTGGCTCGGTGGTTGGGTACGCTCGGTGGAGCGC-CCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  ----------------------------------------------CTAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  ---ACCA-AGCGTTGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  ---GACCGACCGTTGCTCAGGTGGCTAGCTACGCGTGTGT-CCGGGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  ---GACCGCGCGTAGCGCGGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  ---GACCGCGCTTAGCGCGGGTGGCAGGAGCCAGTGGCTC-GCTCCGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  GAGACCGAGCACTTGCTCAGGTGGCAAGCGTCGCCGGTGGGC-ACGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  ---------------------------------GAGACCGAGCGAGCTTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  ------------------------------GCTGGTTGGTTCGAACCACC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  ---ACCG-AGCGTTGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGTTGCT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  ----GAGAACCTACGCTCGGTTGGCTAGCGTCGCCAGGTGAGCGAGCAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  ---------------GCTCGGTTGGCATGTTCGCTG--------TGGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  GAGACCGCGAGCTTGTTCGGGTGGCAAGCGTCG-CCGGTGGGCACGCTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  ----GACCGAGCGTAGCTCGGTTGGCACATTCGCAG--------TGGAGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  GGGACCGATATTTTACTCGGGTGGTTAGCGTCGCGGTGGGCACACTGCCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  GAGACCGAGCGCTTGCTCAAGTGGCAAGCGTCGCCGGTGG-GCACGCTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  --------------GCTCGGTTGGCACGTTCGC-AGTGGAGCGAACGGCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  GAGCCTGAGTGTTTGCTCAGGTGGTTAGTGTCGCCGGTGG-GCACACTAC

GCA_000004655.2_ASM465v1_rm.out279            CGG--CCAGCGTTCGAGTCCCAGACTCGA---------------------
GCA_000004655.2_ASM465v1_rm.out282            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out314            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out334            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            GTA--GGCACGGTCGCGAGT-----------------TCGACTGGCGGGA
GCA_000004655.2_ASM465v1_rm.out360            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out384            C-G--CGAGCGT--------CGAACGATA------------CGCTT--GT
GCA_000004655.2_ASM465v1_rm.out445            CGA--CCAGCGTTCGAGTGTTAGA------------CTCGACGCTC--GT
GCA_000004655.2_ASM465v1_rm.out446            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out526            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out623            ---------CGTTCGATCCTGG----------------------------
GCA_000004655.2_ASM465v1_rm.out728            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1126           CCG--GCGCGGGTTCAATCCTGGGATCGC------------AACTC--AC
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1530           -------------------------------------------CGC--TC
GCA_000004655.2_ASM465v1_rm.out1602           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           C--------------CGCCCTGGGATCAC------------AACTC--GC
GCA_000004655.2_ASM465v1_rm.out1631           CGA--CCAGCGTTCGAGTCCCAGACTCGACA------------CTC--AA
GCA_000004655.2_ASM465v1_rm.out1760           CCA--CAAGCGCTCAAACCCTAGGTTCGA------------CGCTG--GT
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           CGA--CCAGCGGTCGAGTCTTAGACTCGACG------------CTC--GT
GCA_000004655.2_ASM465v1_rm.out2212           CCG--CGCGGGTTCGATCCCTGGGA------------TCGCAACTC----
GCA_000004655.2_ASM465v1_rm.out2220           CGG--CCAGTGTTCGAGTCCTAGACTCAA---------------------
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2593           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2605           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2897           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           CCA--CGAGCGTTCGAACCCC-AAG------------TTCGACGCT----
GCA_000004655.2_ASM465v1_rm.out3174           ----------------------------------------ACGCTC--GA
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3393           CCG--CGAGCGTTTGAACTTCGAACACCA-----GGTTCGACACTC--GT
GCA_000004655.2_ASM465v1_rm.out3398           CCA--CCTGCGTTTGATCATGG----------------------------
GCA_000004655.2_ASM465v1_rm.out3404           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3408           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3517           CCG--CGCGGGTTCGATCCCTGGGA------------TCGCAACTC----
GCA_000004655.2_ASM465v1_rm.out3545           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           CCA--CGCGAGTTCGATCCATGGGA------------TCGCAACTC--GC
GCA_000004655.2_ASM465v1_rm.out3565           CCA--CGCGAGTTCGATCCATGGGA------------TCGCAACTC--GC
GCA_000004655.2_ASM465v1_rm.out3599           CGA--CCAGCGTTCGAGTCCCAAA------------CTTGACGCTC--GT
GCA_000004655.2_ASM465v1_rm.out3651           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           CGA--TCAGCATTCGAGTCTTAGACTCAACG------------CTC--GT
GCA_000004655.2_ASM465v1_rm.out3680           CGA--TCAGCATTCGAGTCTTAGA------------CTCAACGCTC--GT
GCA_000004655.2_ASM465v1_rm.out3753           CCG--CGAGCGTTCAAACCCCAGGTTCAA------------CACTC--GT
GCA_000004655.2_ASM465v1_rm.out3823           CTCAGGTGAAGTGTCACCGGTGGCA------------ACCTGAGCT----
GCA_000004655.2_ASM465v1_rm.out4018           CGG--CACGAGTTCAATCCCCAAGATCGA------------CACTC--GC
GCA_000004655.2_ASM465v1_rm.out4019           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4044           CGG--CGTGAGTTCGACTCCCACATGAGT-----------GAATTT--TC
GCA_000004655.2_ASM465v1_rm.out4175           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           CCG--CGCGGGTTCGATCCCTGGGA------------TCGCAACTC----
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4604           GAA--TAGTCGGTCGTGAATTCGAC---------------TCGCGG--GG
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           -------------------------------CAGGTTCGAACGCTC--GT
GCA_000004655.2_ASM465v1_rm.out4634           CCG--CGCGGGTTCGATCTCTGGGA------------TCGCAACTC----
GCA_000004655.2_ASM465v1_rm.out4643           GAA--CGGCTGGTCGCGAGTTCGAC---------------TCGCGG--GA
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           CCA--CGCTAGTTCGATTCCTAGGATCGC------------AACTC--GC
GCA_000004655.2_ASM465v1_rm.out4965           CCA--CGAGCATTTGAACCCCAGGT------------TCGACGC-T----
GCA_000004655.2_ASM465v1_rm.out5278           GAA--CAGCCGGTCGCGAGTTCGAC---------------TCGCGG--GA
GCA_000004655.2_ASM465v1_rm.out5299           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5300           CCG--CGCGGGTTCGATCCCTGGGA------------TCGTAACTC----
GCA_000004655.2_ASM465v1_rm.out5374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5484           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           --G--CG-------------AGCATCGAA------------CTCTC--AT
GCA_000004655.2_ASM465v1_rm.out5487           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           --G--CG-------------AGCATCGAA------------CTCTC--AT
GCA_000004655.2_ASM465v1_rm.out5579           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5620           CCA--TGAGCATTCGAACCCTAGGT------------TCGACGCTC--GT
GCA_000004655.2_ASM465v1_rm.out5750           -----------GTTC-------------------GACTCGTGGGAC--CT
GCA_000004655.2_ASM465v1_rm.out5978           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6259           CTG--CGAGCGTTCGAACCCTACGTTCG--------ATGGCTCGTG--CT
GCA_000004655.2_ASM465v1_rm.out6326           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6433           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           -AA--CGACTGACCGCGGGTTCA-ATCCC-----TGATTGACTCAC--GG
GCA_000004655.2_ASM465v1_rm.out6613           CCG--CGCGGGTTCGATCCCTGGGA------------TCGCAACTC----
GCA_000004655.2_ASM465v1_rm.out6713           CGA--CCAGCGTTCGAGTCCCAGA------------CTTGACGCTC--AT
GCA_000004655.2_ASM465v1_rm.out6847           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           TAA--CCAGCGTTGAGTCCTCAGA------------CTTGACACTC--TT
GCA_000004655.2_ASM465v1_rm.out7151           CGA--CCAGCATTCAAGTCCCAGA------------CTCGACGCTC--GT
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7154           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7170           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           CCA--CACGAGTTCGATTTCTGGGA------------TCGCAACTCGCGT
GCA_000004655.2_ASM465v1_rm.out7376           ------GCTGGTGGGC-ACGCTGGG------------TTCAACCCT----
GCA_000004655.2_ASM465v1_rm.out7390           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7410           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7411           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7425           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           CCG--CACGGGTTCGATCCCTGGGATCGC------------AACTC--GT
GCA_000004655.2_ASM465v1_rm.out7499           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7506           GGT--CGCGAGTTCG--------------------ACTCGCGGGAC--CT
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           CTG--CGCGGGTTCGATCCCTGGGA------------TTGCAACTC----
GCA_000004655.2_ASM465v1_rm.out7679           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7680           GAT--CGTGGGTCCG-------------------ATCCCCGATCGA--CT
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   CGG--GCAGCGTTCGAGTCCCAGACTCAA---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   GTA--GGCACGGTCACGAGTTCGAC---------------TGGCGG--GA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   CGA--CCAGCGTACGAGTCTGGTTCGACTCCCTAGACTCGACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   CGA--CCAGCGTTCGAGTGTTAGA------------CTCGACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   GAT--CGTGAGTTCG--------------------ACTCGCGGGAC--CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   ---------CGTTCGATCCTGG----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   CCA--CGCTAGTTCGATTCCTAGGATCGC------------AACTC--GC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  CCG--CGAGCGTTTGAACTTCGAACACCA-----GGTTCGACACTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  -AA--CGACTGGCCGCGGGTTCA-ATCCC-----TGATTGACTCAC--GG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  CCG--CGCGGGTTCGATCCCTGGGATCGC------------AACTC--GC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  CGG--CCAGCGTTCGAGTCCTAGACTCAA---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  CGA--CCAGCGTTCGAGTCCCAGA------------CTTGACGCTC--AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  ACG--CGCGGGTTCGATCCCTGGGA------------TCGCAACTC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  TAA--CCAGTGTTGAGTC-CCAGA------------CTTGACACTC--TT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  CGA--CCAGCATTCAAGTCCCAGA------------CTCGACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  ------GCTGGTGGGC-ACGCTGGG------------TTCGACCCT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  CCG--CCCATGCTCGATCCCTG----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  CCG--GCGCGGGTTCAATCCTGGGATCGC------------AACTC--AC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  -------------------------------------------CGC--TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  CGA--CCAGCGTTCGAGTCCCAGACTCGACA------------CTC--AA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  CCA--CAAGCGCTCAAACCCTAGGTTCGA------------CGCTG--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  CGA--CCAGCGGTCGAGTCTTAGACTCGACG------------CTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  -------------------TTCGAC---------------TCGCGG--GG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  CAC--GA-ACGTTCGAACCCCA----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  CCA--CCCGCGT------TCGAGCTCCGC------------TCGGC--GC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  CCA--CCAGCGTTCTATCATGG----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  CCG--CGCGGGTTCGATCCCTGGGA------------TCGCAACTC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  CCA--CGCGAGTTCAATCCATGGGA------------TCGCAACTC--AC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  CGA--CCAGCGTTCAAGTCCCAGA------------CTTGACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  CGA--TCAGCATTCGAGTCTTAGA------------CTCAACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  CCG--CGAGCGTTCAAACCCCAGGTTCGA------------CACTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  CTCGGGTGAAGTGTCACCGGTGGCA------------ACCTGAGCT----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  CGG--CACGAGTTCAATCCCCAAGATCGA------------CACTC--GC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  -----------CAGTTGCCCTGGGA------------TCGCAACTC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  CCG--CGCGGGTTCGATCTCTGGGA------------TCGCAACTC----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  GAA--CGGCCGGTCGCGAGTTCGAC---------------TCGCGG--GA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  -------------------------------CAGGTTCGAACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  CCA--CGAGCATTCGAACCCCAGGT------------TCGACGC-T----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  GAA--CAGCCGGTCGCGAGTTCGAC---------------TCGCGG--GA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --G--CG-------------AGCATCGAA------------CTCTC--AT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  CCA--TGAGCATTCGAACCCTAGGT------------TCGACGCTC--GT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  GGT--CGCGAGTTCT-------------------GACTCGTGGGAC--CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  CTG--CGAGCGTTCGAACCCTACGTTCG--------ATGACTCGTG--CT

GCA_000004655.2_ASM465v1_rm.out279            ----------------T-GCTCG-TCCCTCATTTTTGGGA-------CTC
GCA_000004655.2_ASM465v1_rm.out282            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            --------------GGGTTTTTC-CC-CAGCTCCCAGGGA-------TCA
GCA_000004655.2_ASM465v1_rm.out314            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out334            ------------GGAGG-TTTTT-CCCCAGCTCCCATGGA-------TCA
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            -CCTCACCTCGACGAGATTTTTC-CCGTCTTTCTTCGGGA----------
GCA_000004655.2_ASM465v1_rm.out360            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out384            -GCTCACCCGAGGGTTT-TTTTT-TCCCTCTTTCCCTAGA-------CAC
GCA_000004655.2_ASM465v1_rm.out445            -CTCTCATCCGGGGGGATTTTTC-CCCTCTTTACCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out446            --------------GGATTTTTC-CCCTCTTTACCCGAG-------ACTG
GCA_000004655.2_ASM465v1_rm.out526            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out623            -------------------------------------GAT-------CGA
GCA_000004655.2_ASM465v1_rm.out728            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1126           -GTGTCTC--ACAGGGG-TTTTT-TCCCGTTTCCCCGGGA-------GTA
GCA_000004655.2_ASM465v1_rm.out1295           --CTCACA-CAGGGGGA-TTTTC-CCCTCTTTCCCCGAG--------ATG
GCA_000004655.2_ASM465v1_rm.out1516           ----------------T-TTTTC-TCATCTTTTTTCAGGA-------CTA
GCA_000004655.2_ASM465v1_rm.out1530           -GTGCTCACCCGGGGTC-TTTTC-CCCTCTTTCCTCCGGA-------ACG
GCA_000004655.2_ASM465v1_rm.out1602           ---------------------TC-CACTCTTTG-CCAGGA--------CT
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           -GTGTCT--CACCAGGG-G-TTT-TTCCCGTTTCCCCGGA-------CTG
GCA_000004655.2_ASM465v1_rm.out1631           -CCCTTGCCCGGGAGGATTTTTC-CCCTCTTTACCCGGGA-------CCG
GCA_000004655.2_ASM465v1_rm.out1760           -GTTTGCC------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           -TCCTCGCTCAGGGGAATTTTTC-CCCTCTTTTACCCGGG-------ACT
GCA_000004655.2_ASM465v1_rm.out2212           -GCGTGTCTCACCAGGGGTTTTT-CCCCGTTTCCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out2220           ----------------C-GCTCG-TCCCTCATTTTCGGGA-------CTG
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2593           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2605           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2897           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           -CGTGCTCACCCGGGTTTTTTCC-CCCTCTTTTCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out3174           -G-----CTCGGCGCGGGTT---------TCGCACCGGGA------TTTT
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           -----------------ATTTTT-CC--ACATTTCCTGGG------ATCA
GCA_000004655.2_ASM465v1_rm.out3393           -GCTCGTCCGGGGGAATTTTTCC-CC--TCTTTCCCCGGG------TCTA
GCA_000004655.2_ASM465v1_rm.out3398           -------------------------------------GAT-------CGA
GCA_000004655.2_ASM465v1_rm.out3404           --------CTCACCGAG-GTTTT-TCCCGGCTCCCAGGGA-------TCA
GCA_000004655.2_ASM465v1_rm.out3408           -------------AGGT-T-------------------------------
GCA_000004655.2_ASM465v1_rm.out3517           -GCGTGTCTCACCAGGGGTTTTT-CCCCGTTTCCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out3545           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           -GTGTCCCGCTAGTGGATTTTTC-CA-AATTTCCCCGGGATCAAT-TTCA
GCA_000004655.2_ASM465v1_rm.out3565           -GTGTCCCGCTAGTGGATTTTTC-CA-AATTTCCCCGGGATCAAT-TTCA
GCA_000004655.2_ASM465v1_rm.out3599           -CCCTCGTCCGGGGGGATTTTTC-CCCTCTTTACCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out3651           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           -CCCTCGCCCGGGGGGATTTTTC-CCCTCTTTACCCGGGA-------CTG
GCA_000004655.2_ASM465v1_rm.out3680           -CCCTCGCCCGGGGGGATTTTTC-CCCTCTTTACCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out3753           -GCTCGCC-CGGGAGGA-TTTTC-CCCTCTTTCCCCGGGA-------TTG
GCA_000004655.2_ASM465v1_rm.out3823           -TGCTCGCTTGCTCGGATTTTTC-CCCTCTTTCCTCCGG-------AAGG
GCA_000004655.2_ASM465v1_rm.out4018           -GCGTCTCATTGACAGA-TTTTT-CTTGTTTTCCCCGAGA-------CTA
GCA_000004655.2_ASM465v1_rm.out4019           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4044           -GCGTTGCCTCACCAGG-GTTTT-TCCCCAGCTCCCAAGA-------TCA
GCA_000004655.2_ASM465v1_rm.out4175           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           -GCATGTCTCACTAGGGGTTTT---------TCCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4604           -CCTCACCTCGACGGGTTTTTCC-CGTATTTTCTTCGGGACTGTC-CTTC
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           -GCTCACCCGGGGAACTTTTATC-CCCTCTTTTCCCGGAA-------CTT
GCA_000004655.2_ASM465v1_rm.out4634           -GCGTCTCACCAGG---GGGTTT-TTCTATTTCTCTGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out4643           -CCTCACCTCGACAGGTTTTTTC-TCGTCTTTCTTTAGGACTGTCCTTCG
GCA_000004655.2_ASM465v1_rm.out4668           ------------------------------TTCCCCGGAA-------CTG
GCA_000004655.2_ASM465v1_rm.out4741           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           -GTATCTCGCTAGGGGT-CTTTT-CCATGTTTCCTCGGGA-------TCA
GCA_000004655.2_ASM465v1_rm.out4965           -CGTGCTCGCCCGAGGGATTTTT-CCCCTCTTTCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out5278           -CCTCACCTCGACGGGATTTTTCCCAGTCTTTCTTCGGGACTGTCCTTCA
GCA_000004655.2_ASM465v1_rm.out5299           ------------------------------------------------TG
GCA_000004655.2_ASM465v1_rm.out5300           -GCCTGTCTCACCAGGGGTTTTT-CCCCGTTTCCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out5374           -----------------GGATTT-TATCCCTTTCTTTGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out5484           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           -GCTCACC-CAGGGTTT-TTTTT-CCTCTCTTTCCC--------------
GCA_000004655.2_ASM465v1_rm.out5487           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           -GCTCACC-CAGGGTTT-TTTTT-CCTCTCTTTCCC--------------
GCA_000004655.2_ASM465v1_rm.out5579           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5620           -GCTCGTCCGGGGGGATTTTTCC-CC-TCTTTCACCGGGACTGAC-TTTG
GCA_000004655.2_ASM465v1_rm.out5750           -CACCTCGACGG-GTTT-TTTTT-CCGTCTTTCCTAAGGA--------CT
GCA_000004655.2_ASM465v1_rm.out5978           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6259           -CTCCTGGGGAGGTTTTGTTTTC-CCTTTTTTTCCCGAG-------ACTG
GCA_000004655.2_ASM465v1_rm.out6326           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6433           ------------GGGGTTTTTCC-CG-----TTTCCTGAGTCAAC-TTCG
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           -G-----CCTCACAGGGGTTTTT-CC--CCGTTTCCTGGG------ATCA
GCA_000004655.2_ASM465v1_rm.out6613           -GCGTGTCTCACCAGGGGTTTT--CCCCGTTTCTCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out6713           -CCCTCGTCCGGGGGTTTTTTTC-CCCTCTTTACCTGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out6847           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           -CCCTCGCCCATGGGGAATTTTC-CCCTCTTTCTCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out7151           -CCCTCACCCGGGG-TTTTTTTC-CCTTCTTTACCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           -GCTCA--CCCGGGGGGTTTTTC-CCCCTCTTTCCCGGGACTAAC-TTCA
GCA_000004655.2_ASM465v1_rm.out7154           ---TCA--CCCGGGGGGTTTTTC-CCCCTCTTTCCCGGGACTAAC-TTCA
GCA_000004655.2_ASM465v1_rm.out7170           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           GTCTCACCTAGCTAGGGTTTTTC-CCTGTTTTCCCTAGG-------ATCA
GCA_000004655.2_ASM465v1_rm.out7376           -TGTGCTCGCCCGGGGGATTTTT-CTCCTCTTTCCCCGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out7390           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7410           ------GCTAGGAGGATTTTTTC-CTCGCTCCTTAGGGA---------TC
GCA_000004655.2_ASM465v1_rm.out7411           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7425           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           -------------------------------------GG-------ACTG
GCA_000004655.2_ASM465v1_rm.out7473           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           -GTGTCTC-ACCAGGGG-GTTTT-TCTCGTTTCATCGGGA-------CTG
GCA_000004655.2_ASM465v1_rm.out7499           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7506           -CACCTCGAC---GGGA-TTTTC-CCGTCTTTCTTTGGGA--------CG
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           -GCGTGTCTCACCAGGGGTTTTT-CCCCGTTTCCCCGGG-------ACTG
GCA_000004655.2_ASM465v1_rm.out7679           -------------------TTTC-CTGAGA-------TCA----------
GCA_000004655.2_ASM465v1_rm.out7680           -CACGGGCCTCG-TAGGGTTTTT-CCCCGTTTCCTAAGAT--------CA
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   ----------------T-GCTCG-TCCCTCATTTTTGGGA-------CTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   --------------GGGTTTTTC-CC-CAGCTCCCAGGGA-------TCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   -CCTCACCTCGACGGGATTTTTC-CCGTCTTTCTTCGGGATCGTCCTTCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   -CCCTCGCTCGGGTT-TTTTTTC-CCCTCTTTACCTGGGA-------CTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   -CTCTCATCCGGGGGGATTTTTC-CCCTCTTTACCTGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   -CACCTCGAC---GGGA-TTTTC-CCGTCTTTCTTTGGGA--------CG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   -------------------------------------GAT-------CGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   -GTATCTCGCTAGGGGT-CTTTT-CCATGTTTCCTCGGGA-------TCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  -GCTCGCCCGGGGGAATTTTTCC-CC--TCTTTCCCCGGG------TCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  -G-----CCTCACAGGGGTTTTT-CC--CCGTTTCCTGGG------ATCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  -GTGTCT--CACCAGGG-GTTTT-CCCCGTTTCTCCGGTA-------CTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  ------------------GGTTT-TTCTCTTTTTTCAGAA-------CTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  ----------------C-GCTCG-TCCCTCATTTTCGGGA-------CTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  -CCCTCGTCCGGGGGTTT-TTTC-CCCTCTTTACCTGAG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  -GCGTGTCTCACCAGGGGTTTTT-CCCCGTTTCCCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  -CCCTCGCCCATGGGGAATTTTC-CCCTCTTTCTCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  ------GCTAGGAGGATTTTTTC-CTCGCTCCTTAGGGA---------TC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  -CCCTCACCCGGGT-TTTTTTTC-CCCTCTTTACCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  -GCTCA--CCCGGGGGGTTTTTC-CCCCTCTTTCCCGGGACTAAC-TTCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  -TGTGCTCGCCCGGGGGATTTTT-CTCCTCTTTCCCCGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  -------------------------------------GAT-------CGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  -----------------------------TTTCCTTGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  -GTGTCTC--ACAGGGG-TTTTT-TCCCGTTTCCCCGGGA-------GTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --CTCACA-CAGGGGGA-TTTTC-CCCTCTTTCCCCGAG--------ATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  -GTGCTCACCCGGGGTC-TTTTC-CCCTCTTTCCTCCGGA-------ACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  ---------------------TC-CACTCTTTG-CCAGGA--------CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  -CCCTCGCCCGGGAGGATTTTTC-CCCTCTTTACCCGGGA-------CCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  -GTTTGTC------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  -TCCTCGCTCAGGGGAATTTTTC-CCCTCTTTTACCCGGG-------ACT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  -CCTCACCTCGACGGGTTTTTCC-CGTATTTTCTTCGGGATTGTC-CTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  -GGGTTTCGCACCGGGA-TTTTA-ATACCTTTCCCCGGGA-------CCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  -----------------ATTTTT-CC--ACATTTCCTGGG------ATCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  -------------------------------------GAT-------CGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  --------CTCGCCGAG-GTTTT-TCCCGGCTCCCAGGGA-------TCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  -GCGTGTCTCACCAGGGGTTTTT-CCCCGTTTCCCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  -GTGTCCCGCTAGTGGATTTTTC-CA-AATTTCCCCGGGATCAAT-TTCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  -CCCTCGTCCGGGGGGATTTTTC-CCCTCTTTACCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  -CCCTCGCCCGGGGGGATTTTTC-CCCTCTTTACCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  -GCTCGCC-CGGGAGGA-TTTTC-CCCTCTTTCCCCGGGA-------CTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  -TGCTCGCTTGCTCGGATTTTTC-CCCTCTTTCCCCCGG-------AAGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  -GCGTCTCATTGACAGA-TTTTT-CTTGTTTTCCCCGAGA-------CTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  -GCGTGTCTCACTAGGGGTTTT---------TCCCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  -GCGTCTCACCAGG---GGGTTT-TTCTATTTCTCTGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  -CCTCACCTCGACAGGTTTTTTC-TCGTCTTTCTTTAGGACTGTCCTTCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  ------------------------------TTCCCCGGAA-------CTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  -GCTCACCCGGGGAACTTTTATC-CCCTCTTTTCCCGGAA-------CTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  -CGTGCTCGCCCGAGGGATTTTT-CCCCTCTTTCCCGGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  -CCTCACCTCGACGGGATTTTTCCCCGTCTTTCTTCGGGACTGTCCTTCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  -----------------GGATTT-TATCCCTTTCATTGG-------ACTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  ------------GGGGTTTTTCC-CG-----TTTCCTGAGTCAAC-TTCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  -GCTCACC-CAGGGTTT-TTTTT-CCTCTCTTTCCC--------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  -GCTCGTCCGGGGGGATTTTTCC-CC-TCTTTCCCCGGGACTGAC-TTTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  -CACGTCGAC-G-GGTT-TTTTC-CCGTCTTTCCTGGGGA--------CT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  ------------GGAGG-TTTTT-CCCCAGCTCCCATGGA-------TCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  -CTCCTGGGGAGGTTTTGTTTTC-CCTTTTTTTCCTGAG-------ACTG

GCA_000004655.2_ASM465v1_rm.out279            ACTTCGGT--TGGTCCCAAGTAGA--TAATAGGGTACACACATGCGTG--
GCA_000004655.2_ASM465v1_rm.out282            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            CGT---TT--AGGTGGTCCCATTA--GGGACTAGGGTACACAGGTGT---
GCA_000004655.2_ASM465v1_rm.out314            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out334            CCTTTAGG--TGGTCTCATCAAGG--AA-TAGGGTATACAC--GCGTG--
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            TTGTCCTT--CGGGGT----------AGTTTCAACTAGAAATATGGTA--
GCA_000004655.2_ASM465v1_rm.out360            -------------------------------------AATAGGGTACG--
GCA_000004655.2_ASM465v1_rm.out384            ACTTCGGT--TGGTCCCAGTAGGT--ATATGGGTACACATACCGACAT--
GCA_000004655.2_ASM465v1_rm.out445            ACTTCGGT--TGGTCCCGGCTAGC--TAATAGGTTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out446            ACTTCGGT--TGGTCCCGGCTACC--TAATAGGTTACATACACGTGTG--
GCA_000004655.2_ASM465v1_rm.out526            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out623            CCG---GGTGTCGCACGGGGT--T--TTAACCCCTTTTCCCTTGGATTAG
GCA_000004655.2_ASM465v1_rm.out728            -------------------------------GGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out1126           CACACGCG--TGCATGTTTAGTGG--GACTGGACA-------CGTAT---
GCA_000004655.2_ASM465v1_rm.out1295           ACTTCGGT--TGGTCCCAACTATG--TAAAGGGTAAACAC----------
GCA_000004655.2_ASM465v1_rm.out1516           TCCTTTGGGGCAGTCTCGACTAGA--A-ATAGGTACACACGTGGGTGT--
GCA_000004655.2_ASM465v1_rm.out1530           ACTTCGAT--TGGTTCCGGTCAGA--TATAAGGGTATACATGTGTGCG--
GCA_000004655.2_ASM465v1_rm.out1602           AACTTTTT--GGTTAGTTCTGATTAG--GTAAGGAACACATGTGTGCA--
GCA_000004655.2_ASM465v1_rm.out1610           -------------------------------------ATATATGTATG--
GCA_000004655.2_ASM465v1_rm.out1620           ACTTCGCT--TGGTCCCGACTAGG--TATAGGGTA-----CACGCGCG--
GCA_000004655.2_ASM465v1_rm.out1631           ACTTC---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           GATTCGGT--TGGTCCCAGCTCCC--TAATAGGGCACACACACGAAGT--
GCA_000004655.2_ASM465v1_rm.out2212           ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACGC--GTG--
GCA_000004655.2_ASM465v1_rm.out2220           ACTTAGAT--TAGTTCCGAGTAGA--TAATAGGGTCATTTTTAGGACT--
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------GGTAATAGGGTACACACGTGTG--
GCA_000004655.2_ASM465v1_rm.out2593           -----------------------------------------ACGCGTG--
GCA_000004655.2_ASM465v1_rm.out2605           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2897           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           ACTTTGGT--TGGTCCCGGTTAGG--TATAATGGTACACACGCACGTG--
GCA_000004655.2_ASM465v1_rm.out3174           GGACTAGT--CGGTCCCGGTTAGG--TAACAGGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           ACTTCAGT--TGGTTCCACCTAGG--TAGTAGGGTACACACACGCTTG--
GCA_000004655.2_ASM465v1_rm.out3393           ACTTCGGT--TGGACCCGGCTAGG--TAATAGGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3398           CCG---GGTGTCACACTAGGG-TA--TTAACCCCTTTTCTCTAGGATTAG
GCA_000004655.2_ASM465v1_rm.out3404           CGTTTAGG--TGGTTCTACTAGGG--AA-TATGGTTCACACACGCATG--
GCA_000004655.2_ASM465v1_rm.out3408           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3517           ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3545           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           GTT--------GGTCCTAGTTAGG--TAATA--GGGTACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3565           GTT--------GGTCCTAGTTAGG--TAATA--GGGTACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3599           ACTTCGGT--TGGTCCCGTCTAGG--TAATAGGGTACACATACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3651           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACACGTGCG--
GCA_000004655.2_ASM465v1_rm.out3680           ACTTCGGT--TGGTCCCGGCTAGG--TAACAGGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3753           ACTTCGGT--TGGTCCTGGCTAGG--TAATAGGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out3823           ACTTCGGT--TGGTCCCGACTATG--TAATAGGGTACTCACGCG--TG--
GCA_000004655.2_ASM465v1_rm.out4018           ACTTCGGT--TGATTCCATTTAGG--TAAAAAAGTAC-------------
GCA_000004655.2_ASM465v1_rm.out4019           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4044           CCTTTAGG--TGGTCCCGTTGGGG--AA-TATAGTATACACGCGTCGG--
GCA_000004655.2_ASM465v1_rm.out4175           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           ACTTCGGT--TGGTCCCACCTAGG--AAATAGGGTACACACGCGTG----
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4604           GGG--------GCAGTCTCAACTA--GAAAATAGGGTACACACGC-----
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           CAGT------TGGTCCCGGTTAAG--TATAAGGGTACACACGGGTGTG--
GCA_000004655.2_ASM465v1_rm.out4634           ACTTCGGT--TGGTCCTGGCTAGG--TAATAGGATCGCAACTTTTTCC--
GCA_000004655.2_ASM465v1_rm.out4643           GATAGTCT--TGACTAGAAATAAA--GGTACACATATACACACGC-----
GCA_000004655.2_ASM465v1_rm.out4668           ACTTCGGT--TAGTCCGGGTGGG---TAAAAGGATACACGCATAACAT--
GCA_000004655.2_ASM465v1_rm.out4741           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           ATTTCGGT--TGGTCGTAGCTAGG--TAATAGAATACACGCGGGTACA--
GCA_000004655.2_ASM465v1_rm.out4965           ACTTTGGT--TGGTCCTGGCTAGG--TAATAGGGTACACACGCG--TA--
GCA_000004655.2_ASM465v1_rm.out5278           G----------GGCAGTCTCGACT--TGAAATAGGGTACATACGTGTG--
GCA_000004655.2_ASM465v1_rm.out5299           AGTGCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACGC--GTG--
GCA_000004655.2_ASM465v1_rm.out5300           ACTTCGGT--TGGTCCCAGTTAGG--TAATAGGGTACACACGC--GTG--
GCA_000004655.2_ASM465v1_rm.out5374           ACTTCGGT--TAGTCCCGATT-AG--GTAAGTGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out5484           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5620           GTT--------GGTCCCGGCTAGA--TAATAGAGTACATACATGC-----
GCA_000004655.2_ASM465v1_rm.out5750           GTCCTTCG--GGGTATTTTCGACTAGAAATAGGGTACACACGTATGCG--
GCA_000004655.2_ASM465v1_rm.out5978           -------------------------------------ACACGCACATG--
GCA_000004655.2_ASM465v1_rm.out6259           ACTTCGGT--TGGTTCCGGTTAGG--TATAAGGGTAAACATACACGTG--
GCA_000004655.2_ASM465v1_rm.out6326           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6433           GTT--------GGTCCTAGTTAGG--TAGTAGGG--TACATATAC-----
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           ACTTCAGT--TGGTCCCTATTAGG--TAATAGGGTACACACACGTGTG--
GCA_000004655.2_ASM465v1_rm.out6613           ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACGCGTGTT--
GCA_000004655.2_ASM465v1_rm.out6713           ACTTCGGT--TGATCCCGTCTAGG--TAATAGGGTACGCACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out6847           ----------------------GG--TAATAGGGTACATAC--GCGTG--
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           TCTTCGGA--TGGTCCCAGGTAGG--TAATAGGGTACAAACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out7151           ACTTCGAT--TGGTCCCGGCTAGG--TAACAGGGTACACACACGCGTG--
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           GTT--------GGTCCCGGTTAGA--TAATGG--GGTACACACGC-----
GCA_000004655.2_ASM465v1_rm.out7154           GTT--------GGTCCCGGTTAGA--TAATGG--GGTACACACGC-----
GCA_000004655.2_ASM465v1_rm.out7170           --------------CCGGGGG-AT--TTTTCCCATATG------------
GCA_000004655.2_ASM465v1_rm.out7171           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           ATTTTGGT--TGGTCCTAGTTAGA--AAATAGGGTACACACGTGTGTG--
GCA_000004655.2_ASM465v1_rm.out7376           ACTTCGGT--TGGTCCCGGCTAGA--TAATAGGGTACACACGCGCAC---
GCA_000004655.2_ASM465v1_rm.out7390           ---------------------------TTTCCCATGTG------------
GCA_000004655.2_ASM465v1_rm.out7410           AATCGTGA--GATTAA--TTCCCATAGAACGGGATACACACGTGTGCG--
GCA_000004655.2_ASM465v1_rm.out7411           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7425           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           ACCTCGGT--TGGTCCCGGCTAGG--TTATAGGGTACACA--CGCGTG--
GCA_000004655.2_ASM465v1_rm.out7473           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           ACTTCGGT--TAGTTCCGGCTAGC--GTTTCCTCGAGACTGATTTCGG--
GCA_000004655.2_ASM465v1_rm.out7499           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7506           GTCCTTCA--GGGCAGTCTCGACTAGAAATAGGGTACACACGCGTGCG--
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACACGTGTG--
GCA_000004655.2_ASM465v1_rm.out7679           ACTTCGGT--TGGTCC----------CTATTAGGTAATAGGATACACG--
GCA_000004655.2_ASM465v1_rm.out7680           TGTTCGGT--TGGTCCCTTTTAGATAATAGAGTACACACTCGCGTGCA--
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------AATAGACACACGTGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    -------------------------------------ACACACGTGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   ACTTCGGT--TGGTCCCAAGTAGA--TAATAGGGTACACACATGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   CGT---TT--AGGTGGTCCCATTA--GGGACTAGGGTACACAGGCGT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   G----------GGTAGTCTCAACT--AGAAAAA--------TATGGTA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   -----------------------------------GTAATAGGGTACG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   ----------------------GG--TAATAGGGTACACAC--GCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   ACTTCCTT--CAGTTGGTCCCGACGGTAATAAGGTATACACGCGTGCC--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   --------------CCGGGGG-AA--TTTTCCCATATT------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   ACTTCGGT--TGGTCCCGGCTAGC--TAATAGGTTACACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   -----------------------------------GCACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   GTCCTTTA--GGGCAGTCTCAAG-----------TACACACGCGTGCG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   CCG---GGTGTCGCACGGGGT--T--TTAACCCCTTTTCCCTTGGATTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   ---------------------------------GGGTACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   ATTTCGGT--TGGTCGTAGCTAGG--TAATAGAATACACGCGGGTACA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  ACTTCGGT--TGGACCCGGCTAAA--TAATAGGGTACACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  ACTTCAGT--TGGTCCCTATTAGG--TAATAGAGTACACACACGTGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACTCGCGTGT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  ------------GGAC----------ACACATGCGTGTGTCGTGGTGT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  TCCTCCGGGACAGTCTTGACTAGA--A-ATAGGGTACATACGTGGGCG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  ACTTAGAT--TAGTTCCGAGTAGA--TAATAGGGTCATTTTTAGGACT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  ACTTCGGT--TGATCCCGTCTAGG--TAATAGGGTACGCACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACACGC--GTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  TCTTCGGA--TGGTCCCGGGTAGG--TAATAGGGTACAAACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  AATCGTGA--GATTAA--TTCCCATAGAACGGGATACACACGTGTGCG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  --------------------------GGTAATAGGGTACACACGTGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  -----------------------------------------ACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  ACTTCGAT--TGGTCCCGGCTAGG--TAACAGGGTACACACA--CGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  GTT--------GGTCCCGGTTAGA--TAATGG--GGTACACACGC-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  ACTTCGGT--TGGTCCCGGCTAGA--TAATAGGGTACACACGCGCAC---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  GCAGCGGATGTCACACCGGGT-GA--TTTTCCCATGTG------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  ACTTCGGT--TGGTCCCGGCTAGG--TTATAGGGTACACA--CGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  CACACGCG--TGCATGTTTAGTGA--GACTGGACA-------CGTAT---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  ACTTCGGT--TGGTCCCAACTAGG--TAAAGGGTAAACAC----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  ACTTGGAT--TGGTTCCGGTCAGA--TATAAGGGTATACATGTGTGCG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  AACTTTTT--GGTTAGTTCTGATTAG--GTAAGGAACACATGTGTGCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  -------------------------------------ATATATGTATG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  ACTTC---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  GATTCGGT--TGGTCCCAGCTCCC--TAATAGGGCACACACACGAAGT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  AGG--------GTAGTCTCAACTA--GAAAATAGGGTACACACGC-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  ACTACGGT--TGGTCCCGGTTAGG--TAATAGGGTACACACGTTTCCC--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  ACTTCAGT--TGGTTCCACCTAGG--TAGTAGGGTACACACACGCTTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  CCG---GGTGTCACACTAGGG-TA--TTAATCCCTTTTCCCTAGGATTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  CGTTTAGG--TGGTTCTACTAGGG--AA-TATGGTTCACACACGCATG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  ACTTCGGT--TGGTCCCGACTAGG--TAATAGGGTACACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  GTT--------GGTCCTAGTTAGG--TAATA--GGGTACACACCCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  ACTTCGGT--TGGTCCCGTCTAGG--TAATAGGGTACACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  ACTTCGGT--TGGTCCCGGCTAGG--TAATAGGGTACACAC--ACGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  ACTTCGGT--TGGTCCTGGCTAGG--TAATAGGGTACACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  ACTTCGGT--TGGTCCCGACTATG--TAATAGGGTACTCACGCG--TG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  ACTTCGGT--TGGTTCCATTTAGG--TAAAAAAGTAC-------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  ACTTCGGT--TGGTCCCACCTAGG--AAATAGGGTACACACGCG--TG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  ACTTCGGT--TGGTCCTGGCTAGG--TAATAGGATCGCAACTTTTTCC--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  GATAGTCT--TGACTAGAAATAAA--GGTACACATATACACACGC-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  ACTTCGGT--TAGTCCGGGTGGG---TAAAAGGATACACGCATAACAT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  CAGT------TGGTCCCGGTTAAG--TATAAGGGTACACACGGGTGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  ACTTTGGT--TGGTCCTGGCTAGG--TAATAGGGTACACACGCG--TG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  G----------GGCAGTCTCGACT--AGAAATAGGGTACATACGTGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  ACTTCGGT--TAGTCCCGATT-AA--GTAAGTGGTACACACACGCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  GTT--------GGTCCTAGTTAGG--TAGTAGGG--TACATATAC-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  GTT--------GGTCCCGGCTAGA--TAATAGAGTACATACATGC-----
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  GTCCTTCG--GGGCATTTTCGACTAGAAATAGGGTACACGCGCATGCA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  CCTTTAGG--TGGTCTCATCAAGG--AA-TAGGGTATACAC--GCGTG--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  ACTTCGGT--TGGTTCCGGTTAGG--TATAAGGGTAAACATACACGTG--

GCA_000004655.2_ASM465v1_rm.out279            -CGTGTTCAGTGGGTCTGT---------GCGGGAA-------ACACACAT
GCA_000004655.2_ASM465v1_rm.out282            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out314            ------------------------------CGGCTAGAGAGGATACACAC
GCA_000004655.2_ASM465v1_rm.out334            -ATCATTCAGTAG----------GACTGCACGTTTCTCGTG---------
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            -CGCGTTTAGT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out360            -CGCACGCAGT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out384            -ACGTGTGCACGTTGTACT--------GCACGTTTCCCGTGCACTGATGC
GCA_000004655.2_ASM465v1_rm.out445            -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out446            -CGCGTTCAGTGGGACT----------GCACGTTTCCG----------G-
GCA_000004655.2_ASM465v1_rm.out526            ----------------------------CATGTTTCCCATGCACTAAGG-
GCA_000004655.2_ASM465v1_rm.out623            CATAGTCCAATCTTAGTTA---------ATTAGGTATAGGGTACACACAC
GCA_000004655.2_ASM465v1_rm.out728            -CGTGTTTAGTGGGACT---------------------------------
GCA_000004655.2_ASM465v1_rm.out1126           ---------GTGCGTGTGTCGTGGACTGCACGTTTCCCATGCACTGAGGC
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           -ACGTTTT-TTTGCACTG-------------AGA----------------
GCA_000004655.2_ASM465v1_rm.out1530           -TGTTTAATA--G----------TACTACATATTTCCCGATTATTAAGA-
GCA_000004655.2_ASM465v1_rm.out1602           --T-GTTTAGTGGATTGCA-------TACATGTTACTGGTGCACTCAAG-
GCA_000004655.2_ASM465v1_rm.out1610           --T-GTTTGGTGG---GAC-------CGTACGTTCCTCATGCACTAAAG-
GCA_000004655.2_ASM465v1_rm.out1620           -CGCGTTCAGTGGGACTG----------CACGTTTCCTCCTAGTGTGTGT
GCA_000004655.2_ASM465v1_rm.out1631           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           --T-GGTCCCAGCTAGCTA-------ATAGGGTAC---------------
GCA_000004655.2_ASM465v1_rm.out2212           -CGCGTTCAGTGGGACT----------GCACGTTTTCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out2220           -GACTTCGATTGGTCCCGA---------GTAGATAATAGGGTATACACAC
GCA_000004655.2_ASM465v1_rm.out2592           -CGAGTTCAGTGGGACT---------------------------------
GCA_000004655.2_ASM465v1_rm.out2593           -TGAGTTCAGTGGGACT---------------------------------
GCA_000004655.2_ASM465v1_rm.out2605           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2897           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           -CGCATTCAGT--GGTT----------GCACATTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out3174           -CGCGTTCAGTGGTACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           -CGCATTCAGTGGTACT----------GCATGTTTCCCGTGCATTGAGG-
GCA_000004655.2_ASM465v1_rm.out3393           -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out3398           CCTAGTCTGATCTTAGTGA---------GG--------TATAGGGTAGAC
GCA_000004655.2_ASM465v1_rm.out3404           -TGCGTTTAATGG----------GACTATACGTTTCCCGTGCAA------
GCA_000004655.2_ASM465v1_rm.out3408           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3517           -CACGTTCAGTGGGACT----------GCATGTTTCCCGTGCACGTGTG-
GCA_000004655.2_ASM465v1_rm.out3545           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           -CGCGTTCAGTGGTACT----------TCACGTTTCCTGTGCGCGTTCA-
GCA_000004655.2_ASM465v1_rm.out3565           -CGCGTTCAGTGGTACT----------TCACGTTTCCTGTGCGCGTTCA-
GCA_000004655.2_ASM465v1_rm.out3599           -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out3651           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           --C-GTTTAGTGGGACTGC-------ACGTTTTCC---------------
GCA_000004655.2_ASM465v1_rm.out3680           -CGCGTTTAGTGGGACT----------GCACGTTTTCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out3753           -CGCGTTCAGTGGGATTG----------CACGTTTCCCTTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out3823           -CGTGTTCAGTGACACT----------GCACGTTCTCTGTGCATTGAGG-
GCA_000004655.2_ASM465v1_rm.out4018           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4019           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4044           -TG---------G----------GACTGCACGTTTCCGTGCACT------
GCA_000004655.2_ASM465v1_rm.out4175           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           -CGCGTTCAGTGGGACT----------GCACGTTTCTCGTGC--------
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4604           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           --C-ATTCTGTAGGACTGC-------ATGTTCCTG---------TACAC-
GCA_000004655.2_ASM465v1_rm.out4634           -TGCGCGCTGG--GTAT----------AGGTAATAGGATCATAATTTTT-
GCA_000004655.2_ASM465v1_rm.out4643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4668           --G-CGTTTAG---------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           -TA----TTCAGTGGTAGT--------GCATGTTTCCTGTGTACTTCGG-
GCA_000004655.2_ASM465v1_rm.out4965           -CGTGTTCAGTGGGACT----------GCACGTTTTCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out5278           -CGTGTTTAGTGGGACT---------------------------------
GCA_000004655.2_ASM465v1_rm.out5299           -CGCGTTCAGTGGAACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out5300           -CGCGTTCAGTGGAACT----------ACACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out5374           -TGCGTTTAGTGGGCCA----------ACACGTTTCCCGTGCACTAGGA-
GCA_000004655.2_ASM465v1_rm.out5484           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5620           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5750           --C-GTGCACTGA---GAC-------ACCTAGTGGTCTTCAATCTTATT-
GCA_000004655.2_ASM465v1_rm.out5978           --T-ATTTAGTGG---CAC-------TGTACATTTGTGTTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out6259           -AGCGTTCACTGGTACT----------GCACGTTTCCGGTGCCTCCAAT-
GCA_000004655.2_ASM465v1_rm.out6326           --------------------AGGGTACACATGTTTATGGGACTGTACGT-
GCA_000004655.2_ASM465v1_rm.out6433           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           -CGCGTTCAGTGGTACT----------GCATGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out6613           -TAGTGGAA------CT----------GCACGTTTTCCGTGCACTTAGA-
GCA_000004655.2_ASM465v1_rm.out6713           -CGCGTTCAGTAGGACT----------GTACGTTTCCCGTGCGCTGAGG-
GCA_000004655.2_ASM465v1_rm.out6847           -CGCGTTCAGTGGGACT----------GTACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           -CACGTTTAGTGGGACG----------GTACGTTTCCCGTGCACTAAGA-
GCA_000004655.2_ASM465v1_rm.out7151           -CGTGTTTAGTGGGACT----------GCATGTTTCCCGTACACTGAGG-
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7154           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7170           --GCCTCTAGGTTAAGTCC---------CAAATGGTTAGGGTACCCACAC
GCA_000004655.2_ASM465v1_rm.out7171           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           -CT---TCAGTGGGAAT----------ACACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out7376           -------------------------------GTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out7390           --ACCTCTGGGTTGAGTCC---------CAGATGGTTAGGGTACATACAT
GCA_000004655.2_ASM465v1_rm.out7410           --C-GTTTAGTGGGAGTCG-------CCCACTTTCCATGCTTT-------
GCA_000004655.2_ASM465v1_rm.out7411           ----------------------------------------GAATGCACAT
GCA_000004655.2_ASM465v1_rm.out7425           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           -CG-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           -TTAGCCCCGGCTAGGTAA--------TAGGGTTTCCTCAGGACTGACT-
GCA_000004655.2_ASM465v1_rm.out7499           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7506           --C-GTTCAGTGA---GAT-------TACATGTTTCCCGTGCACTGAGA-
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           -CGCGTTTAGTGGGATT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out7679           -CACGTTCAGT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out7680           --C-GTTCAATGG---TAC-------TGTACGTTTCCCGTGCACTGAGG-
GCA_000004655.2_ASM465v1_rm.out7685           -CGCGTTGAGTGGTACG----------GCGCATTTCCCGTGCATTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    -CGCGTTGAGTGGTACG----------GCGCATTTCCCGTGCATTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   -CGTGTTCAGTGGGTCTGT---------GCGGGAA-------ACACACAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   ------------------------------CGGCTAGAGAGGATACACAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   -CGCGTTTAGTGGGACT---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   -CGCACGCAGT---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   -----GTGCACTGAGGCCT-------AGTGCATCCAATCTCGTGTAAGT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   --GCCTCTAGGTTAAGTCT---------CAAATGGTTAGGGTACCCACAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   -CGCGTTCAGT---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   --C-GTTCAGTGA---GAC-------TACACGTTTCCCGTGCACTGAGA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   ----------------------------CATGTTTCCCATGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   CATAGTCCAATCTTAATTA---------ATTAGGTATAGGGTACACACAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   -CGCGTTTAGTGGGACT---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   --------------------AGGGTACACATGTTTATGGGACTGTACGT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   -TA----TTCAGTGGTAGT--------GCATGTTTCCTGTGTACTTCGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  -CGCGTTCAGTGGTACT----------GCATGTTTCCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  ------TTAATGGAACTG----------CACGTTTTCCGTGCACTTAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  -GAGTGCGGAT---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  -TACGTTT-TTTTCACTG-------------AAA----------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  -GACTTTGATTGGTCCCGA---------GTAGATAATAGAGTATACACAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  -CGCGTTCAGTAGGACT----------GTACGTTTCCCGTGCGCTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  -CGCGTTCAGTGGGACT----------GCACGTTTTCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  -CACGTTTAGTGAGACG----------GTACGTTTTCCGTGCACTAAGA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  --C-GTTTAGTGGGAGTCG-------CCCACTTTCCATGCTTT-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  ----------------------------------------GAATGCACAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  -CGAGTTCAGTGGGACT---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  -TGAGTTCAGTGGGACT---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  -CGTGTTTAGTGGGACT----------GCATGTTTCCCGTACACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  -------------------------------GTTTCCCGTGTACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  --ACCTCTGGGTTGAGTCC---------CAGATGGTTAGGGTACATACAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  -CGTGTTCAGTGGGACT----------GCACATTTCCCGTGCACTAAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  ---------GTGCGTGTGTCGTGGACTGCACGTTTCCCATGCACTGAGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  -TGTTTAATA--G----------TACTACATGTTTCCCGAGTATTAAGA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  --T-GTTTAGTGGATTGCA-------TACATGTTACTGGTGCACTCAAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --T-GTTTGGTGG---GAC-------CGTACGTTCCTCATGCACTAAAG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  --T-GGTCCCGGCTAGCTA-------ATAGGGTAC---------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  -GTGCACTGAGGCGCGTAATAGGGTACACACGTTTCCCGTGCACTGAGGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  -CGCATTCAGTGGTACT----------GCATGTTTCCCGTGCATTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  CCTAATCTGATCTCAGTGA---------GG--------TATAGGGTAGAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  -TGCGTTTAATGG----------GACTATACGTTTC--GTGCAA------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  --------GTTGGTACCCA---------CTAATGTCAGAAGTACACACGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  -CACATTCAGTGGGACT----------GCATGTTTCCCGTGCACGTGTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  -CGCGTTCAGTGGTACT----------TCACGTTTCCTATGCGCGTTCA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  -CGCGTTCAGTGGGACT----------GCACGTTTCCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  -CGCGTTTAGTGGGACT----------GCACGTTTTCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  -CGCGTTCAGTGGGATTG----------CACGTTTCCCTTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  -CGTGTTCAGTGACGCT----------GCACGTTCTCCGTGCATTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  -----------------------------------AGGTAGTATACAAAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  -CGCGTTCAGTGGGACT----------GCACGTTTCTCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  -TGTGCGCTGG--GTAT----------AGGTAATAGGATCGTAATTTTT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --G-CGTTTAG---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --C-ATTCTGTAGGACTGC-------ATGTTCCTG---------TACAC-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  -CGTGTTCGGTGGGACT----------GCACGTTTTCCGTGCACTGAGG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  -CGTGTTTAGTGGGACT---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  -TGCGTTTAGTGGGCCA----------ACACGTTTCCCGTGCACTAGGA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  --C-GTGCACTGA---GAC-------ACCTAGTGGTCTTCAATCTTATT-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  -ATCATTCAGTAG----------GACTGCACGTTTCTCGTG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  -AGCGTTCACTGGTACT----------ACACGTTTCCAGTGCCTCCAAT-

GCA_000004655.2_ASM465v1_rm.out279            G--------TGAGGATTTGT---GCGGGAAACGCACATGTG---------
GCA_000004655.2_ASM465v1_rm.out282            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            ---------------------GCGTGTTTAGTAGTATTGCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out314            TTACGTGTGTTCTGTTGTAATGTGCGTTTTCCGCACACCGA---------
GCA_000004655.2_ASM465v1_rm.out334            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            --------------------------------GGGACTACACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out360            --------------------------------GGTATTGCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out384            TACAAT---------------CCTA-------------------------
GCA_000004655.2_ASM465v1_rm.out445            CCTAGTGCCTCCAATCTCATTTCTAGCGTGTGTT-AGGGACGCA--CACG
GCA_000004655.2_ASM465v1_rm.out446            CCTAGTGCTTCCAATCTCATTACTAGCGTGTGTT-AGGGACGCG--CACG
GCA_000004655.2_ASM465v1_rm.out526            CCTAGTGCCTCCAATCTCATGGTGTGAGTGCGGTGTGTGTAAGTGTGTGT
GCA_000004655.2_ASM465v1_rm.out623            GTGAGTGCGTTCAATGGGACTATGTGTTACCCGCACATAGG---------
GCA_000004655.2_ASM465v1_rm.out728            --------------------------------------GTACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out1126           CCAATCTCATTCCTAGTATGTATTAGGGACACGTGTGTGCG---------
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           -----------------------CCTAATGCCTCCAATCTT---------
GCA_000004655.2_ASM465v1_rm.out1530           TATATGGTCTTCAATCT---------------------------------
GCA_000004655.2_ASM465v1_rm.out1602           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           TAGTGTGCGTCCTGAGTTGTACCCT----TCT--AAAAAAA---------
GCA_000004655.2_ASM465v1_rm.out1631           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2212           CCAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2220           G--------TGCGCGTTTAGTGGGACTGTGTGTTTCCCGCA---------
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------------------GCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out2593           --------------------------------------GCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out2605           -------------------------------------------------G
GCA_000004655.2_ASM465v1_rm.out2897           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           CCTAGTGCCTTCAATCTCA-------------------------------
GCA_000004655.2_ASM465v1_rm.out3174           CG------------------------------------CGCACG--CGTG
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           AC------------------------------------TTAGTA--C---
GCA_000004655.2_ASM465v1_rm.out3393           CC------------------------------------CAGTGC------
GCA_000004655.2_ASM465v1_rm.out3398           GTGTGTGCGTTTAATGGTATTGTGTGTTACCCGCACATAGG---------
GCA_000004655.2_ASM465v1_rm.out3404           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3408           --TTGTCTCTCCATTCTCTTTCCAA-------------------------
GCA_000004655.2_ASM465v1_rm.out3517           CGTG----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3545           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           GTGGTACTTCA---------------------------------------
GCA_000004655.2_ASM465v1_rm.out3565           GTGGTACTTCA---------------------------------------
GCA_000004655.2_ASM465v1_rm.out3599           CCTAGTGCCTCCAATCTCATTTCTAGCGTGTGTT-AGGGACGCG--CACG
GCA_000004655.2_ASM465v1_rm.out3651           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3680           CCTAGTGCCTCCAATCTCATTCCTAACGTGTGTG-TGCGTGTGT--TGTA
GCA_000004655.2_ASM465v1_rm.out3753           TCTAGTGCCTCCAATTTCATTCCTAGCGTGTG--TTAGGAA---------
GCA_000004655.2_ASM465v1_rm.out3823           CCTAGTATCTTCAATCAAA-------------------------------
GCA_000004655.2_ASM465v1_rm.out4018           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4019           --GTGAGTGTTCACTGGTAATATGCTTCTCTCACAC-ACCA---------
GCA_000004655.2_ASM465v1_rm.out4044           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4175           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           --------GTTCAGTGGGACTGTCCGTTACCCGTAAACCGA---------
GCA_000004655.2_ASM465v1_rm.out4604           -------------------ATGTGCGTTCAGTGGGACTGCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4634           TCCCGTGCACTGGGGTCTA-------------------------------
GCA_000004655.2_ASM465v1_rm.out4643           -------------------GTGCGTGTTCAGTGGGACTGTATGT--TTCC
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           CCTAGTACCTTCAATCTCAATCCTAGCATGTG--TTAGGAT---------
GCA_000004655.2_ASM465v1_rm.out4965           CCTAGTGCCTCTAATCTCA-------------------------------
GCA_000004655.2_ASM465v1_rm.out5278           --------------------------------------GCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out5299           CCAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5300           CCAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5374           CTCTAGGCCTCCAATCTCAATCCTAGTGTGTGTT-AGGGACGCG--CACG
GCA_000004655.2_ASM465v1_rm.out5484           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           ----------------------------------------G---------
GCA_000004655.2_ASM465v1_rm.out5620           -------------------GTGCGCGTTCAGTGGGACTGCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out5750           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5978           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6259           T---------------TCATTCTTAGCGTGTGTT-AGGGATACG--CAAA
GCA_000004655.2_ASM465v1_rm.out6326           TTCCACGCA---------------------------CCGAG-----GGTG
GCA_000004655.2_ASM465v1_rm.out6433           -------------------GTGCGTGTTCGGTGGTACTGTACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out6435           -------------------------------------TGTACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out6436           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           CT------------------------------------TAGGAC------
GCA_000004655.2_ASM465v1_rm.out6613           CTAAGTGTCTCCAATGTAA-------------------------------
GCA_000004655.2_ASM465v1_rm.out6713           CCTAGTGCCTCCAATCTCATTTCTAGCATGTGTT-AGGGACGTG--CACG
GCA_000004655.2_ASM465v1_rm.out6847           TCTAGTGTCTTCAATCTCA-------------------------------
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           ACTAGTGCCTACAATCTCTTTCCTAGTGTGTGTG-CATGTGTCA--TGGT
GCA_000004655.2_ASM465v1_rm.out7151           CCTAGTGCCTCTAATCTCATCCTAGCGT-GTGCT-AGGGACGCG--CACG
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           -------------------GTGCGCGATCAGTGGTACTACACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out7154           -------------------GTGCGTGATCAGTGGTACTGCACGT--TTCC
GCA_000004655.2_ASM465v1_rm.out7170           GCGTGCGTGTTCAGTGGTATGTCATGTTCCCCATGCATGGA---------
GCA_000004655.2_ASM465v1_rm.out7171           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           CTTAGTGCCTCCT-------------------------------------
GCA_000004655.2_ASM465v1_rm.out7376           TCTA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7390           GCTTGCACATTCAGTGGTACTGCATGTTTCCCGTGCACCTA---------
GCA_000004655.2_ASM465v1_rm.out7410           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7411           T----------------TT----CCGTATTTCGAGGTCCGT---------
GCA_000004655.2_ASM465v1_rm.out7425           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           T-CGGTTGGTCCCGGCTAGGTTATAGGGTAC-------------------
GCA_000004655.2_ASM465v1_rm.out7499           --------------------------TTTCCCATACACCAG---------
GCA_000004655.2_ASM465v1_rm.out7506           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           CCTA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7679           --------------------------------GGTACTGCACGT--TTCA
GCA_000004655.2_ASM465v1_rm.out7680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7685           C-------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    C-------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   G--------TGAGGATTTGT---GCGGGAAACGCACATGTG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   ---------------------GCGTGTTTAGTAGTATTGCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   TTACGTGTGTTCTGTTGTAATGTGCGTTTCCCGCACACCGA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   --------------------------------------ACACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   --------------------------------GGTATTGCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   TCTAGTATCTTCAATCTCA-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   GCGTGCGCGTTCAGTGGTATGTCATGTTCCCCGTGCATGGA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   CCTAGTGCCTCCAATCTCATTCCTAGCATGTGTT-AGGGACGCA--CACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   --------------------------------GGGACTACATGT--TTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   CCTAGTGCCTCCAATCTCATGGTGTGAGTGCGGTGTGTGTAAGTGTGCGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   GTGAGTGCGTTCAATGGGACTATGTGTTACCCGCACATAGG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   --------------------------------------GTACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   TTCCACGCA---------------------------CCGAG-----GGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   CCTAGTACTTTCAATCTCAATCCTAGCATGTG--TTAGGAT---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  CC------------------------------------CAGTGC------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  CT------------------------------------TAGGAC------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  CCAAGTGCCTCCAATGTTATTTCTAGTGTGTG--TTAAGGG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  --------------------------------GGAACTGCACGT--TTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  -----------------------CCTAATGCCTCCAATCTT---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  G--------TGCGCGTTTAGTGGGACTGTGTGTTTCCCGCA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  CCTAGTGCCTCCAATCTCATTTCTAGCATGTGTT-AGGGACGTG--CACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  CCAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  ACTAGTGCCTACAATCTCTTTCCTAGTGTGTGTG-CATGTGTCA--TGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  T----------------TT----CCGTATTTCGAGGTCCGT---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  --------------------------------------GCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  --------------------------------------GCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  CCTAGTGCCTCCAATCTCATCCTAGCGT-GTGCT-AGGGACGCG--CACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  -------------------GTGCGCGATCAGTGATACTGCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  TCTA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  GCTTGCACATTCAGTGGTACTGCATGTTTCCCGTGCACCTA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  CCTA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  CCAATCTCATTCCTAGTGTGTGTTAGGGACACGTGTGTGCG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  TATAGGGTCTCCAATCT---------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  -------------------ATGTGCGTTCAGTGGGACTGCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  -------------------------------------------------G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  GCGCACGCGTG-----------------TGTG--------T---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  AC------------------------------------TTAGTA--C---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  GTGTGTGCGTTTAATGGTATTGTGTGTTACCCGCACATAGG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  GCTTGTGCTTTTAGTGAGCATGCGTGGGCCTGTGCTCTAGG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  CGTG----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  ATGGTACTTCACGTTTCCTGTGCACGTTCAGTGGTACTTCATGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  CCTAGTGCCTCCAATCTCATTTCTAGCGTGTG------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  CCTAGTGCCTCCAATCTCATTCCTAACGTGTGTG-TGCGTGTGT--TGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  TCTAGTGCCTCCAATTTCATTCCTAGCGTGAG--TTAGGAA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  CCTAGTGTCTTCAATCAAA-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  ACGTGAGTGTTCACTGGTAATATGCTTCTCTCACAC-ACCA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  CCTAGTGCCTCCAATCTCA-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  --------GTTCAGTGGGACTGTCCGTTACCCGTAAACCGA---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  TCCCGTGCACTGGGGTCTA-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  -------------------GTGCGTGTTCAGTGGGACTGTATGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  CCTAGTGCCTCTAATCTCA-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  --------------------------------------GCACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  CTCTAGGCCTCCAATCTCAATCCTAGTGTGTGTT-AGGGACGCG--CACG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  -------------------GTGCGTGTTCGGTGGTACTGTACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  -------------------GTGCGCGTTCAGTGGGACTGTACGT--TTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  -------------------------GTTTCCCATACACCAG---------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  G---------------TCATTCTTAACGTGTGTT-AGGGATACG--CAAA

GCA_000004655.2_ASM465v1_rm.out279            -----A-GGATTTAGGTCCTCAAAGTCTACATTT-GC---GTGT-GTTGA
GCA_000004655.2_ASM465v1_rm.out282            --------------------------ATCTAAATCCTAGTGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out283            CGTGTACTTTGGC-CTAGTGCCTCCAATCTAAATCCTAGTGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out314            -----A-GGCTTTAGTTCCTTCAAGTCTCTAGTC-TAATCATGT-GTTGA
GCA_000004655.2_ASM465v1_rm.out334            ------------GCCTAGTGCCTCCAATGTCATTTCTAGCGTGG-GTTAG
GCA_000004655.2_ASM465v1_rm.out335            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            CGTGCACTGAGACCTAGTGGTCTCCAATCTCATTTCTAGCATGT-GGTAA
GCA_000004655.2_ASM465v1_rm.out360            CGTGTAGTGAGACCTAGTGGTCTTCAATCTCATTCCTAGCGTAT-GTTAA
GCA_000004655.2_ASM465v1_rm.out384            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out445            CGTGTG--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out446            TGTGTG--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out526            CCTGAG-TTGTACCCTTCTCAATCCAATCTCATTTCTAGCGTG-------
GCA_000004655.2_ASM465v1_rm.out623            -----A-GGCTTTAGGTCCTCAAAGCCTATAGATACATGTGTTG-GACGC
GCA_000004655.2_ASM465v1_rm.out728            CGTGCACTGAGATCTGAAGGTCTCCAATCTTATTCCTAGCGTGT-GTTGT
GCA_000004655.2_ASM465v1_rm.out1126           -----T-GTGTCGTGGTATGAGTGCAATCTCATTCCTAGCGTGC-GTGTG
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           -----A-ATTTTAACGTGTCTTAGGATGCGCACA-CACAAGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out1530           --------AAATTAATAGGGTCTCCAATTTAAATTCTAACGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out1602           --------ACTAGAGCCTCCAATCT------CTTTCAAGCATGT-GCTTG
GCA_000004655.2_ASM465v1_rm.out1610           --------GCTAGACTT-CCGATCT------CTTT---------------
GCA_000004655.2_ASM465v1_rm.out1620           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1631           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           -------------------------------------AGCGTGT-GTTTG
GCA_000004655.2_ASM465v1_rm.out2165           ---------ACATACGCGTGCGCGT----TTAGTGGGACTGTAT-GTTTC
GCA_000004655.2_ASM465v1_rm.out2212           -----------------GTGCCTCCAATGTTATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out2220           -----C-ACGTGAGGATCCTCAAAGTCTACATTT-GC---GTGT-GTTGG
GCA_000004655.2_ASM465v1_rm.out2592           CATGCACTAAGACCTAGATGTCTCCAATCTCATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out2593           CGTGCACTAAGGCCTAGATGTCTCCAATCTCATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out2605           TTCACTGATCATGCCTAATGCCTCCATTATCATTTTTAGCATGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out2897           -------------------------------------TGTGTTT-GGACG
GCA_000004655.2_ASM465v1_rm.out3002           -----------------AT---------------CCTAGTGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out3174           TGTGTGCGTGTGT-CGTGGTGTTCCAATCTCAATCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out3194           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           ---------------------CTCAAATCTCTTTCCTACCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out3393           ---------------------CTCCAATCTCATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out3398           -----A-GGCTTTAGGTCTTCAAAGTCTATTTAATGCATGTGTG-AACGT
GCA_000004655.2_ASM465v1_rm.out3404           --------CGGGGCCTAGTACCTCCAATCTCAACCCTATCGTAT-ATTAG
GCA_000004655.2_ASM465v1_rm.out3408           ----------CAGACGTGTGTTTGGGATCACACGCACATAT---------
GCA_000004655.2_ASM465v1_rm.out3517           -----------------TGT------------------------------
GCA_000004655.2_ASM465v1_rm.out3545           -----------T-------TTCAAGCGTCTGC--------AGAG-CATGC
GCA_000004655.2_ASM465v1_rm.out3564           ------CTGTGGC-CTAGTGTCTCCAATCTCAATCCTAGTGTGT-GTTGT
GCA_000004655.2_ASM465v1_rm.out3565           ------CTGTGGC-CTAGTGTCTCCAATCTCAATCCTAGTGTGT-GTTGT
GCA_000004655.2_ASM465v1_rm.out3599           CGTGTG--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3651           -----------------------------------GC---ATGT-GTTGG
GCA_000004655.2_ASM465v1_rm.out3678           ---------GTGCACTGAGGCCTAG----TGCCTCCAATCTCAT-TCCTA
GCA_000004655.2_ASM465v1_rm.out3680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3753           -----C-GCGTA--------------------------------------
GCA_000004655.2_ASM465v1_rm.out3823           -----------------TT---------------CCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4018           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4019           -----A-AACTTTAGATCCTCCAAGTCTCTAGTT-TAAGCGTGT-GTGTT
GCA_000004655.2_ASM465v1_rm.out4044           --------GAGACTTAGGTGTCTCCAATCTTAATCCTAGCGTAT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4175           ------------------------------------TTCTAGAG-TGTGT
GCA_000004655.2_ASM465v1_rm.out4221           ------------GCATAGTGCCTCCAATCTCATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4276           ---------------------------------------------ATTAT
GCA_000004655.2_ASM465v1_rm.out4374           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           -----A-GGATTTATATTCTTCAAGTCTCTAGATACTAGCGTGT-ATTGG
GCA_000004655.2_ASM465v1_rm.out4604           CGTGCATTGAGGC-CTAGTGCCTCCATTCTCAATCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4610           --------------------------ATTTCAATCCTAGCATGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4611           --------TGTCCTGGTATCTCC---------------------------
GCA_000004655.2_ASM465v1_rm.out4634           -----------------GTGCCTCCAATCTTATTCCTACCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4643           CGTGCACCGAAGC-CTAATGCCTCTAATCTCAATCTTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           ----------------------------------------GTGT-GTGTT
GCA_000004655.2_ASM465v1_rm.out4896           -----C-TGGTTGTGCACA-------------------------------
GCA_000004655.2_ASM465v1_rm.out4965           -----------------TT---------------CCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out5278           CGTACACTGAGACCTAGTGGTCTCCAATCTCATTCCTAGTGTGT-GTTAA
GCA_000004655.2_ASM465v1_rm.out5299           -----------------GTGCCTCCAATGTTATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out5300           -----------------GTGCCTCCAATGTTATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out5374           TGTGTG--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5484           ------------------------------------TGGTATAT-GTTAG
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           ------------------------------------TGGTATAT-GTTAG
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           -----A------GGCCTACGGCTATCCTCTCATCCTTAACGTGT-GAATA
GCA_000004655.2_ASM465v1_rm.out5620           CGTGCACTGATGC-CTAGTGCCTCTAATCTCATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out5750           --------TTTAGCGT--------------------------GT-GTGTG
GCA_000004655.2_ASM465v1_rm.out5978           --------CCTTAGCCTCCAAGCTC------TCCCTAAGCATGT-AAACG
GCA_000004655.2_ASM465v1_rm.out6259           CGTGTG--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6326           CATGGT-CTGAGGCATAGGGTCTCCAATCTCAATTCTAGCGTGT-TAGGG
GCA_000004655.2_ASM465v1_rm.out6433           CGTACAGTGAGGC-ATAGGTCCTCGAATCTCTTTCCTAACGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out6435           CGTACAGTGAGGC-ATAGTTCCTCAAATCTCATTCCTAACG---------
GCA_000004655.2_ASM465v1_rm.out6436           ------------------------------------TAACGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out6513           ---------------------CTCAAATCTCTTTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out6613           -----------------GTGCCTCCAATGTTATTTCTAGTGTGTGTTAAG
GCA_000004655.2_ASM465v1_rm.out6713           C-------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6847           -----------------TT---------------CCTAGTGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out6881           --------------------------------------GCATGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out6908           GTGAGTGT------GGTGTATGT---------------------------
GCA_000004655.2_ASM465v1_rm.out7151           CGTACACA------CACCACACTCACACCA----------------CAAC
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           CATGCACTGAGGT-CTAGTGTCTCCAATCTCAATCCTAACGTGT-GTTAT
GCA_000004655.2_ASM465v1_rm.out7154           CGTGCACTGAGGT-CTAGTGTCTCCAATTTCAATCCTAGCGTGT-GTTAT
GCA_000004655.2_ASM465v1_rm.out7170           -----A-GCTT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           -------------------------------------AGTATTT-GTTGG
GCA_000004655.2_ASM465v1_rm.out7230           -----------------AGGCCTCCAATATCAATTCTAGCGTGTGTTGAG
GCA_000004655.2_ASM465v1_rm.out7376           -----------------GTGCCTCCAATCTTATTTCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out7390           -----A-GGCTATAGGTCTTCCAAGTTTCTGGCTTAAAGTGTGT-GTTGT
GCA_000004655.2_ASM465v1_rm.out7410           ---------G------------AGA----TCCGTGGCATCTAAT-CTC--
GCA_000004655.2_ASM465v1_rm.out7411           -----G-GCATATAATCTGTACCAAAAAGTACT--CCTATGTGT-GTAAG
GCA_000004655.2_ASM465v1_rm.out7425           -------------------GTCTCCAATCTCATTCCTAGTATGT-GTTAA
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           ---------------------CTCCAATCTCATTCCTAGCGTGT-TTTAG
GCA_000004655.2_ASM465v1_rm.out7474           --------ACAC-GCGTGCGTGTTCAGTGGGACT-GCACGGGAC-GCGCA
GCA_000004655.2_ASM465v1_rm.out7499           -----A-GACTTTAGGTCCTCCAAGTCTCTAGTT-TAAGCGTGG-GATGG
GCA_000004655.2_ASM465v1_rm.out7506           --------CCTACTGGTCTCCAATC----TCTTTCCCAGCGTGT-GTTAA
GCA_000004655.2_ASM465v1_rm.out7507           --------------------------------TTTTCAGAGTGT-GTTAA
GCA_000004655.2_ASM465v1_rm.out7613           -----------------GTGCCTCCAATGTTATTCCTAGCGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out7679           T-------GTGCACTTAGGACCTAAAATCTCTTTCCTAGTGTGT-GTTAG
GCA_000004655.2_ASM465v1_rm.out7680           --------CTTATGACCACAAATCT-----CTTTCC--------------
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   -----A-GGATTTAGGTCCTCAAAGTCTACATTT-GC---GTGT-GTTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   --------------------------ATCTAAATCCTAGTGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   CGTGTACTTTGGC-CTAGTGCCTCCAATCTAAATCCTAGTGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   -----A-GGCTTTAGGTCCTTCAAGTCTCTAGTC-TAATCATGT-GTTGA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   CGTGCACTGAGACTTAGTGGTCTCCAATCTCATTTCTAGCATGT-GGTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   CGTGTACTGAGACCTAGTGGTTTTCAATCTCATTCCTAGCGTAT-GTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   -----------------TT---------------CTTAGTGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   --------AGTATAGGGACGCACAC----TTACACACACCACAT-GTGTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   -----A-GCTTT-AGCTTCTCCAAGTCTCTAGCTTAAAGTATTT-GTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   CATATG--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   CGTGCACTAAGACCTACTGGTCTCCAATCTCTTTTCCAGCGTGT-GTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   --------CCTACTGGTCTCCAATC----TCTTTCCCAACGTGT-GTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   CCTGAG-TTGTACCCTTCTCAATCCAATCTCATTTCTAGCGTG-------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   -----A-GGCTTTAGGTCCTCAAAGCCTATAGATACATGTGTTG-GACGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   CGTGCACTGAGATCTGAAGGTCTCCAATCTTATTCCTAGCGTGT-GTTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   CATGGT-CTGAGGCCTAGGGTCTCCAATCTCAATTTTAGCGTGT-TAGGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   -----C-TGGTTGTGCACA-------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  ---------------------CTCCAATCTTATTCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  ---------------------CTCAAATCTCTTTCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  -----A-CACACGCCAAGTGCCTCCAATGTTATTTCTAGTGTGT-GTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  CGTGCACTTAGGCCAAGT-GCCTCCAATGTTATTTCTAGTGTGT-GTTA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  -----A-ATCTTAGCGTGTCTTAGGACGCGCACA-CACAAGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  -----C-ATGTGAGGATCCTCAAAGTCTACATTT-GC---GTGT-GTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  C-------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  -----------------GTGCCTCCAATGTTATTCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  --------------------------------------GCATGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  GTGAGTGT------GGTGTATGT---------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  ---------G------------AGA----TCCGTGGCATCTAAT-CTCTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  -----G-GCATATAATCTGTACCAAAAAGTACT--CCTATGTGT-GTAAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  CATGCACTAAGACCTAGATGTCTCCAATCTCATTCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  CGTGCACTAAGGCCTAGATGTCTCCAATCTCATTCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  CGTGTGTG------TGCGTGT-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  CATGCACTGAGGT-CTAGTGTCTCCAATCTCAATCCTAACGTGT-GTTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  -----------------GTGCCTCCAATCTTATTTCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  -----------T-------TTCAAGCGTCTGC--------AGAG-CATGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  -----A-GGCTATAGGTCTTCA-AGTTTCTGGCTTAAAGTGTGT-GTTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  -------------------GTCTCCAATCTCATTCCTAGTATGT-GTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  -----------------GTGTCTCCAGCCTCATTCCTAGCGTGT-TTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  -----T-GTGTCGTGGTATGAGTGCAATCTCATTCCTAGCGTGC-GTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  --------AAATTAATAGGGTCTCCAATCTAAATTCTAACGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  --------ACTAGAGCCTCCAATCT------CTTTCAAGCATGT-GCTTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------GCTAGACTT-CCGATCT------CTTTCTAG-----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  -----------------------------TATGTTACAGGTGTG-TATGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  -----------------------------------------AGC-GTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  ---------ACATACGCGTGCGCGT----TTAGTGGGACTGTAT-GTTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  CGTGCATTGAGGC-CTAGTGCCTCCATTCTCAATCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  TTCACTGATCATGCCTAATGCCTCCATTATCATTTTTAGCATGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  ---------GAGGCCTAGTGCCTTCAATCTCAATCCTAGTGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  -----G-CGAGTGTCGTGGTGTTCCAATCTCAATCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  ---------------------CTCAAATCTCTTTCCTACCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  -----A-GGCTTTAGGTCTTCAAAGTCTATTTAATGCATGTGTG-AACGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  --------CGGGGCCTAGTACCTCCAATCTCAACCCTATCGTAT-ATTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  -----T-GGCGT-------GTGAAGCGTGTGC--------AGAG-GACAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  -----------------TGT------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  CATGCACTGTGGC-CTAGTGTCTCCAATCTCAATCCTAGTGTGT-GTTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  --------------------------------------GCATGT-GTT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  -----C-GCGTA--------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  -----------------TT---------------CCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  -----A-AACTTTAGATCCTCCAAGTCTCTAGTT-TAAGCGTGT---GTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  ------------------------------------TTCTAGAG-TGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  --------------------------------TTCCTAGCGTGT-GTTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  -----A-GGATTTATATTCTTCAAGTCTCTAGATACTAGCGTGT-ATTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  -----------------GTGCCTCCAATCTTATTCCTACCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  CGTGCACCGAAGC-CTAATGCCTCTAATCTCAATCTTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --------TGGCCTGGTATCTCC---------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  --------------------------ATTTCAATCCTAGCATGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  ----------------------------------------GTGT-GTGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  -----------------TT---------------CCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  GGTGCACTGAGACCTAGTGGTCTCCAATCTCATTCCTAGTGTGT-GTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  TGTGTG--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  CGTACAGTGAGGC-ATAGGTCCTCGAATCTCTTTCCTAACGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  ------------------------------------TGGTATAT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  CGTGCACTGATGC-CTAGTGCCTCTAATCTCATTCCTAGCGTGT-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  -----A-GACTTTAGGTCCTCCAAGTCTCTAGTT-TAAGCGTGG-GATGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  --------TTTTAGCGTGTGTTAAA----GATGCGCACGCGTGT-GTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  ------------GCCTAGTGCCTCCAATGTCATTTCTAGCGTGG-GTTAG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  CGTGTG--------------------------------------------

GCA_000004655.2_ASM465v1_rm.out279            ACGCGCACGTGTGT--GTGCGCATGTAGTGTTGCG---------TTGTGT
GCA_000004655.2_ASM465v1_rm.out282            GGACATGGACGGATGTGTGCACGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out283            GGACACGGACGGATGTGTGCACGTGTGT--------------TGTGGTAT
GCA_000004655.2_ASM465v1_rm.out314            ACGCGTGCACGTGTGTATGTGG-----------TG---------TGGCGT
GCA_000004655.2_ASM465v1_rm.out334            AG------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out335            ---GAGATGCACACGTGTGTGCATGTGT--------------AGTGGTGT
GCA_000004655.2_ASM465v1_rm.out359            GGACGCGCACGCGT--GTGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out360            GGACGCGCT-----------ACGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out384            --GC---------ATGTGTTAGGGACGTG--------------CATGTGT
GCA_000004655.2_ASM465v1_rm.out445            -----------------TGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out446            -----------------TGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out526            -------------------------TGTC--------------GTGGTGT
GCA_000004655.2_ASM465v1_rm.out623            ACACGCGTGCGT----GTGGGGTGT--T-----------------GTGCT
GCA_000004655.2_ASM465v1_rm.out728            GGTATGAGTGT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out1126           TGCG---------TGTGTCGTG--GTATG--------------AGTGCAA
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           AGACGCGCATGTGT--GTGTACGTGTGTTGT--TG---------TGGTGT
GCA_000004655.2_ASM465v1_rm.out1530           AAACACGCGTGTGGGTGCGTGTGTTGTGT--------------GTGATGT
GCA_000004655.2_ASM465v1_rm.out1602           GGAC----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1631           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           ----------------GTGTGTGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out2140           ACATGCATGCATGCGTGTGTGGAGCTG-----------------CGTTGG
GCA_000004655.2_ASM465v1_rm.out2165           CCGT----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2212           GGACGCGCACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out2220           TCGCGCACGCGC----TCGTGTGTGTGGTGTTGCG---------TTGTGT
GCA_000004655.2_ASM465v1_rm.out2592           GGATACGCTAGCGTGTGTGTGCGTGT------------------------
GCA_000004655.2_ASM465v1_rm.out2593           GGATGCGCTAGCGTGTGTGTGCGTGTGT--------------TGCGGTGT
GCA_000004655.2_ASM465v1_rm.out2605           GGACACGCACGTATGTGTGTACGTGTAT--------------TGTGGTAT
GCA_000004655.2_ASM465v1_rm.out2897           CGTAGTACGCAT----GTATGCGTGTTGAG--------------TGGTGC
GCA_000004655.2_ASM465v1_rm.out3002           GGACGCGCACACGTGTGTATGCGTGTGT--------------TGTGG---
GCA_000004655.2_ASM465v1_rm.out3174           GAACGCGCACGCGTGTGCGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out3194           ---CGCACACTCCCGTGTGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out3391           GGACGTGCACGCGTGTGTTGTGGTGTGA--------------GT------
GCA_000004655.2_ASM465v1_rm.out3393           GGACACGCACGCGTGTGTATGAGTG----------------------TGG
GCA_000004655.2_ASM465v1_rm.out3398           GCACGTGTGTGT----GTGTGGGTG--T-----------------TGTGT
GCA_000004655.2_ASM465v1_rm.out3404           GATG--------------CACACACGC----------------------G
GCA_000004655.2_ASM465v1_rm.out3408           -------------TTTTTTTTCTTACATA--------------GCAGTGT
GCA_000004655.2_ASM465v1_rm.out3517           ------------------------------------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out3545           ACACGTGTGTGT----GTGGTGGTGTGA-----------------ATATG
GCA_000004655.2_ASM465v1_rm.out3564           GGTGTGGTG-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out3565           GGTGTGGTG-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out3599           -----------------TGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out3651           ACGCACACGCATGTGTGTGTGGT----------------------GTTGT
GCA_000004655.2_ASM465v1_rm.out3678           ACGT----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3680           ----------------------------------------------GTGT
GCA_000004655.2_ASM465v1_rm.out3753           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3823           GGACGCGCACGC--------------------------------GTGTGT
GCA_000004655.2_ASM465v1_rm.out4018           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4019           GGACACACAGTG-T--GTGCATGTGTGG-----TG---------TGGTGT
GCA_000004655.2_ASM465v1_rm.out4044           ACAC--------------ACGCATGTGTT--------------GTGATGT
GCA_000004655.2_ASM465v1_rm.out4175           TGGCGCGCACGCGTGTGTTTACATGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out4221           GGACGCGCACGCGTGTGTGCGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out4276           GGACGCGCACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out4374           -------------------------------------------GTTGTGC
GCA_000004655.2_ASM465v1_rm.out4424           ATGTGCATGCATGTGTGGGTGCGTGGGTAGTGGCAGTGGGTATAACATTG
GCA_000004655.2_ASM465v1_rm.out4604           GGATACGCACACGTGTGTGTTCGTGTGT--------------TGTGATGT
GCA_000004655.2_ASM465v1_rm.out4610           GGACAC------GCACGCATGCGTGTGC--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out4611           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4634           GGACGCGCACGCGTGTGTGTGCATGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out4643           GGACGCGCACGCGTGTGTGTGCGTGTGT--------------TGTTGTGG
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           GGACGCATACGCGGGTGTGTGCGTGTG----------------GTGTTGT
GCA_000004655.2_ASM465v1_rm.out4896           --CA---------TGTGTGTGC--GTGTT--------------GTGGAGT
GCA_000004655.2_ASM465v1_rm.out4965           GGACGTGCACGCGTGTGTGTGCGTGTGT--------------C--GTGGT
GCA_000004655.2_ASM465v1_rm.out5278           GGACGCGCACGCGTGTGTGT--GCGTGT--------------GTTGTGGT
GCA_000004655.2_ASM465v1_rm.out5299           GGACGCGCACGCGTGTATGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out5300           GGACGCGCACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out5374           -----------------TGTGCGTGTGT--------------TGTGG---
GCA_000004655.2_ASM465v1_rm.out5484           GGACGTGGACACGTGTGTGTACATGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           GGACGTGGACACGTGTGTGTACATGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           AGAAACACGCATGCGTGTGTGCGTAGTG--G--TG------------TAT
GCA_000004655.2_ASM465v1_rm.out5620           GGATGTGCACGTGTGTGTGTGCGCGTGT--------------GTCGTGGT
GCA_000004655.2_ASM465v1_rm.out5750           CGTG----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5978           GAAC----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6259           -----------TGCGTGTGGCGTGGACT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out6326           A-------------------------TGC--------------GTAAGCG
GCA_000004655.2_ASM465v1_rm.out6433           GGACGCGCACGCGTGTGTG----CGTGC--------------GTTGTGGT
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           AGACACGCA-------CTGTGTGTGCAC--------------GTTGTGGT
GCA_000004655.2_ASM465v1_rm.out6513           GGACGCGCTCGCTTGTGTGCGTGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out6613           GGACACACATGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out6713           ----------------------GTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out6847           GAACGCGCA--------CGTGTGTGTAT--------------CATGATAT
GCA_000004655.2_ASM465v1_rm.out6881           GGACGCGCACGCGTGTGTATGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out6908           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7151           ACACGCGCACGCATGTGTGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out7152           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           GGTGAGTGTGTGGTATGTGTTCGTGTGT----------------------
GCA_000004655.2_ASM465v1_rm.out7154           GGTGAGTGTGTGGTATGTGTTCGTGTGC--------------GTCCTACC
GCA_000004655.2_ASM465v1_rm.out7170           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           ACACGCACGCGT----GTGCGTGCATGT-----------------GAAGT
GCA_000004655.2_ASM465v1_rm.out7230           AAACGCGCACGCGTGTGTGTGGGCGCGCG-------------TAGTGTAT
GCA_000004655.2_ASM465v1_rm.out7376           GAACGCGTACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out7390           ACTTGCACGCGT----GTGGAGTTGCAT-----------------GGGTG
GCA_000004655.2_ASM465v1_rm.out7410           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7411           ACACGCACGTGT----GTGTGCATGCGAT----------------GGTGC
GCA_000004655.2_ASM465v1_rm.out7425           GGACGCGCACGCGTGTGTGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           GGACGCGCATGCGTGTATGTGCGTGTGT--------------CATGGTGT
GCA_000004655.2_ASM465v1_rm.out7474           CGTG---------TGTATATGCGTGTGTC--------------ATGGTGT
GCA_000004655.2_ASM465v1_rm.out7499           ACGTGCACACGTGTGTGCGGTG-----------TG---------TGATGT
GCA_000004655.2_ASM465v1_rm.out7506           GGAC----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7507           GGACGCGCACGCGTGTGTGTGCGTGTGT--------------TGTGGTGT
GCA_000004655.2_ASM465v1_rm.out7613           GGACACGCACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000004655.2_ASM465v1_rm.out7679           GGACATGCACGCGTGTGTGTTCGTGTGT--------------TGTAGTGT
GCA_000004655.2_ASM465v1_rm.out7680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   ACGCGCACGTGTGTGTGTGTGCATGTAGTGTTGCA---------TTGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   GGACATGGACGGATGTGTGCACATGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   GGACACGGACGGATGTGTGCACGTGTGT--------------TGTGGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   ACGCGTGCACGTGTGTATGTGG-----------TG---------TGGCGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   GGACGCGCACGCGTGTGTGC--GTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   GGACGCGCT-----------GCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   AAACGTGCA--------CGCGTGTGTAT--------------CGTGGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   AGTA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   ACACGCACGCGT----GTGCGTGCATGT-----------------GAAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   -----------------TGTGCATGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   GGACGCGCTCGCATGTGTGAGCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   GGAC----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   -------------------------TGTC--------------GTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   ACACGCGTGCGT----GTGGGGTGT--T-----------------GTGCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   GGTGTGAGTGT---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   A-------------------------TGC--------------GTAAGCG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   --CA---------TGTGTGTGC--GTGTT--------------GTGGAGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  GGACACGCACGCGTGTGTATGAGTGTAT--------------GAGTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  GGACGCGCTCGCTTGTGTGCGTGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  GGGA---------CACACATGCGTGTGTC--------------GTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  --------AGGGACACACATGCGTGTGT--------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  AGACGCGCATGTGT--GTGTACGTGTGTTGT--TG---------TGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  TCGCGCACGCGC----TCGTGTGTGTGGTGTTGCG---------TTGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  ----------------------GTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  GGACGCGCACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  GGACGCGCACGCGTGTGTATGCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  CCCA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  ACACGCACGTGT----GTGTGCATGCGAT----------------GGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  GGATACGCTAGCGTGTGTGTGCGTGTGT--------------TGCGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  GGATGCGCTAGCGTGTGTGTGCGTGTGT--------------TGCGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  --------------------------GT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  GGTGAGTGTGTGGTATGTGTTCGTGTGC--------------GTCCTACC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  -------------------------------------------GTTGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  -------------TGTGTGTAAGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  GAACGCGTACGCGTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  ACACATGTGTGT----GTGGTGGTGTGA-----------------ATATG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  ACTTGCACGCGT----GTGGAGTTGCAT-----------------GGGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  GGACGCGCACGCGTGTGTGTGCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  GGATGCGCACGCGTGTATGTGCGTGTGT--------------CATGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  ------------------------------------------GCGTGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  TGCG---------TGTGTCGTG--GTATG--------------AGTGCAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  AAACACGCGTGTGGGTGCGTGTGTTGTGT--------------GTGATGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  GGAC----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  GAGCATGTGCGT----GTTGTGGCATGG-----------------GTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  ------------GTGTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  TTTGACATGCATGCGTGTGTGGAGCTG-----------------CGTTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  CCGT----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  GGATACGCACACGTGTGTGTTCGTGTGT--------------TGTGATGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  GGACACGCACGTATATGTGTACGTGTAT--------------TGTGGTAT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  GGACGCGCACACGTGTGTATGCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  GAAC---------GCGCACGCGTGTGTCG--------------TGGTGTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  ---CGCACACTCCCGTGTGTGCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  GGACGTGCACGCGTGTGTTGTGGTGTGA--------------GT------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  GCACACGTGTGT----GTGTGGGTG--T-----------------TGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  GATG--------------CACACACGC----------------------G
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  G----CACACGT----CTGGTGGTGTTA-----------------GTGTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  ------------------------------------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  GGTGTGGTG-----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  -----------------TGTGCGTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  GGACGCACACG------CATGTGTGTGT--------------GGTGTTG-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  ----------------------------------------------GTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  GGACGCGCACGC--------------------------------GTGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  GGACACACAGTG-T--GTGCATGTGTGG-----TG---------TGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  TGGCGCGCACGCGTGTGTTTACATGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  GGACGCGCACGCGTTTGTGTGCGTGTGT--------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  ATGTGCATGCATGTGTGGGTGCGTGGGTAGTGGCAGTGGGTATAACATTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  GGACGCGCACGCGTGTGTGTGCATGTGT--------------CGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  GGACGCGCACGCGTGTGTGTGCGTGTGT--------------TATTGTGG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  GGACAC------GCACGCATGCGTGTGC--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  GGACGCATA--CGCGGGTGTGTGTGTG----------------GTGTTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  GGACGTGCACGCGTGTGTGTGCGTGTGT--------------C--GTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  GGACGCGCACGTGTGTGTGC--GTGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  -----------------TGTGCGTGTGT--------------TGTGG---
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  GGACGCGCACGCGTGTGTG----CGTGC--------------GTTGTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  GGACGTGGACACGTGTGTGTACATGTGT--------------TGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  GGATGTGCACGTGTGTGTGTACGCGTGT--------------GTCGTGGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  ACGTGCACACGTGTGTGCGGTG-----------TG---------TGATGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  CGTG----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  AG------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  ---GAGATGCACACGTGTGTGCATGTGT--------------AGTGGTGT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  -----------TGCGTGTGGCGTGGACT--------------TGTGGTGT

GCA_000004655.2_ASM465v1_rm.out279            GAGT--GTGGA-GTGAGTTCGTGTG-TGCAT---CCTCGTTGTAC-----
GCA_000004655.2_ASM465v1_rm.out282            GAGTGTGGTGTA-TGTTCG--TGTG-CGTC----CTAAGTTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out283            CTAAATCCTAGTGTGTGTTAG-----------------------------
GCA_000004655.2_ASM465v1_rm.out314            GAGT--ATGAA-GTGA--GTTTGTG-TGTCT---TCCT-ATGTATCTTTT
GCA_000004655.2_ASM465v1_rm.out334            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out335            TAGTGT--GGTG-TGTGTCTCTGTG-TGTC----CTTGTGGTACCGTTTT
GCA_000004655.2_ASM465v1_rm.out359            GAGTGT--GGTG-TGTGTGAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out360            GAGTGT--GGTG-TATGTGAGTGTG-CGTT----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out384            AAGT--GTGGT-GTGTGTTTGTGTG-TGTC----CTGGATTGTACTCTCT
GCA_000004655.2_ASM465v1_rm.out445            GTG--------------TTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out446            GTG--------------TTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out526            GA-------------GTGCGGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out623            TGA----C---TGTGGAGTGTAT---------------------------
GCA_000004655.2_ASM465v1_rm.out728            ------------------------G-CGTC----CTGAGTTGTACCTTTC
GCA_000004655.2_ASM465v1_rm.out1126           TCTC--ATTCC-TAGCGTGTGTATG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           GAGT--GTAGT-TTGCATGAATGT---GTGT---CCTAATTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out1530           GAGC--GTGGT-GTGTGTACGTGTA-CGTC----CTAATTTGCAACTTAA
GCA_000004655.2_ASM465v1_rm.out1602           AAGT--AC----ACATG----TTCG-C--G----CGTTGTTG--------
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1631           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           GAGTGC--AGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out2140           TGGT--GTGGT-GTGCATGCATGCA-CATCCTCCTTTGTACGTACCCTTT
GCA_000004655.2_ASM465v1_rm.out2165           GTAC--T-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2212           GAGT--GCGGTG-TGTGTAAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out2220           GAGT--GTGGA-GTGAGTTCGTGTG-TGCGT---CGTCGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2593           GAAT--GTGATG-TGTGT--------------------------------
GCA_000004655.2_ASM465v1_rm.out2605           GAGTGT--GGTG-TGTGTATGTGTG-------------------------
GCA_000004655.2_ASM465v1_rm.out2897           GAGT--GTGGTGTGATGTGTGTTTGGTGTCCTATATTGTACTTAGCTTTC
GCA_000004655.2_ASM465v1_rm.out3002           ----------TG-TGTGTTCGTGTG-CGTC----CTGATTTGTACCCTCC
GCA_000004655.2_ASM465v1_rm.out3174           TGAG-TGTGGTG-TGTGTTTATGTG-CATC----CTGCTTTGTATCCTCT
GCA_000004655.2_ASM465v1_rm.out3194           GTGT--------------TGTTGGG-CATC----CTGAATTATACCCTCT
GCA_000004655.2_ASM465v1_rm.out3391           ------GTGGTA-TGTGTTCGTGTG-TGTC----CTGAGTTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out3393           TGTGTGTAAGTG-TGTATTCCCTTC-TAAA----AAAA------------
GCA_000004655.2_ASM465v1_rm.out3398           GTG----A---AGTGAGTTCATGTG-CATTC---CTAGTTTTACC-CTTA
GCA_000004655.2_ASM465v1_rm.out3404           TGTT--GTGGT-GTGTGTTCGTGTG-AGTT----CTAAATTGTACCCCCT
GCA_000004655.2_ASM465v1_rm.out3408           GAGT--GTGAT-GTGTGATAATGTG-TGCC----CTAGTTTGTACTCTTC
GCA_000004655.2_ASM465v1_rm.out3517           GAGT--GCAGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out3545           GCGT--GTGACCGTGTGTTGATCAG-TGTGC---ATCCAATTGTACTCAC
GCA_000004655.2_ASM465v1_rm.out3564           -------TTGTG-TGTGTTCGTATG-CGTC----TTGAGTTGTACAGTCT
GCA_000004655.2_ASM465v1_rm.out3565           -------TTGTG-TGTGTTCGTATG-CGTC----TTGAGTTGTACAGTCT
GCA_000004655.2_ASM465v1_rm.out3599           GAAT--GTGGTG-TGTGTTAGTGTG-CGTC----CTATGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out3651           ATAT--GTGGA-GTGAATTCGTGTG-CGTCC---TTAG-CTATACTATCT
GCA_000004655.2_ASM465v1_rm.out3678           GTGT----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3680           GAGT--GTGGT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out3753           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3823           GAGT--GTGGTG-TGTGTAAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out4018           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4019           GAGT--GTGAGAGTAAGTTCATGTG-CATC----TTTATATGTACCATTC
GCA_000004655.2_ASM465v1_rm.out4044           AAGT--ATGGT-GTATGTTCGTGTA-TGCT----CTGAATTGTATCCTTA
GCA_000004655.2_ASM465v1_rm.out4175           GTGT--------------TCTTGTG-CATT----CTGAGTTGTATCCTCT
GCA_000004655.2_ASM465v1_rm.out4221           GAGTGT--GGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGCACCCTTC
GCA_000004655.2_ASM465v1_rm.out4276           GAGT--GCGGTG-TGTGTTATTGTA-CGTC----CTGAGATGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out4374           GAGTGT--GGAG-TGAGTTCGTGTG-TGTC----CTTAGTCGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out4424           CAGT--GTGGA-GTGTGTTCGTATA-CGTCC---TGGCTTTGTACCCTTG
GCA_000004655.2_ASM465v1_rm.out4604           GATTGTGGTG-----TGTGAGTATG-CGTT----CTGAGTTGTTTCCTTT
GCA_000004655.2_ASM465v1_rm.out4610           GTGT--------------TCTTGTG-CTTC----CTGAATTGTATCCTCT
GCA_000004655.2_ASM465v1_rm.out4611           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4634           GAGT--GCGGTG-TGTGTAAGTGTA-CTTT----CTGAGTTATACCCTTC
GCA_000004655.2_ASM465v1_rm.out4643           CGTG-----------TGTGAGTGTA-CACT----CTGAGTTGTATCCT--
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           GTGAACTTAGAA-TAAGTTCGTGTG-CGTA----CTTAGTTGTACCTTCA
GCA_000004655.2_ASM465v1_rm.out4896           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4965           GAGT--GTGGTG-TGTGTAAGTGTG-CGTT----ATGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out5278           GT----------------GAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out5299           GAGT--GCGGTG-TATGTTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out5300           GAGT--GCGGT---------------------------------------
GCA_000004655.2_ASM465v1_rm.out5374           ----------TG-TGTGTTCGTGTG-CGTC----TTGAGTTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out5484           GAGTGC--GGTG-TCTGTTTGTGCG-TGTC----CTTAATTGTACCCTTA
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           GAGTGC--GGTG-TCTGTTTGTGCG-TGTC----CTTAATTGTACCCTTA
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           ATGG--ATGGAAGGGAGGGGTT-----GTGT---TCCTCATGTACCCTGT
GCA_000004655.2_ASM465v1_rm.out5620           GTGAGTGTGGTG-TGTGTAAGTGTG-CATT----CTGAATTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out5750           TGTT--ATG---GTGTGTGAGTGTG-CGTG----CTAAGTTGCACCCT--
GCA_000004655.2_ASM465v1_rm.out5978           ATGC--AC----ATGTG----TATA-CATG----CGTAGTGGT-------
GCA_000004655.2_ASM465v1_rm.out6259           ATGT--GTGGTG-TGTGTTCATGTG-CATC----CTGAATTTTACTTCCC
GCA_000004655.2_ASM465v1_rm.out6326           TGTG--ACGTG-GTGTGTTCGTGAG-CGTC----CTAAATTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out6433           GTGAGTGTTGTG-TGTGTTCGTGTG-CGTT----CTGATTTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           GTGAGT--GTTG-TGTGTTCGTGTG-CGTT----CTGAGTTGTACCCTTA
GCA_000004655.2_ASM465v1_rm.out6513           GAGTGTGATGTG-TGTTCTCGTGTT-TTTC----CTGAGTTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out6613           GAGT--GCGGTG-TGTGTAAGTGTG-CTTT----CTGAGTTCTACCCTTC
GCA_000004655.2_ASM465v1_rm.out6713           GAGT--GTGGTG-TGTGTTAGTGTG-CGTC----CTGTGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out6847           GAAT--GTGGTG-TGTGTAAGTGTG-CGTC----CTGAACTGTACTCTTC
GCA_000004655.2_ASM465v1_rm.out6881           GAGTGT--GGTG-TGTGTTAGTGTG-CATT----CTGAGTTGTACCCTTT
GCA_000004655.2_ASM465v1_rm.out6908           -----------------AAAGTGTG-TATC----CTAAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out7151           GAGT--GTGGTG-TGTGTAAG-----------------------------
GCA_000004655.2_ASM465v1_rm.out7152           -------------TGTGTAAGTGTA-CGTC----CTGAGTTGTTGCCTTC
GCA_000004655.2_ASM465v1_rm.out7153           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7154           TTATACCCTCTC-AAGGAAA------------------------------
GCA_000004655.2_ASM465v1_rm.out7170           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           TGCA--TG---GGTGGTGTGATGTG-TGTAC---GTCCTTTGTAT-CCTC
GCA_000004655.2_ASM465v1_rm.out7230           GAGT--GTGGTG-TGCGTACGTGTG-CGTC----CTGAGCTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out7376           GAGT--GCGGTG-TGTGTAAGTGTG-CGT---------------------
GCA_000004655.2_ASM465v1_rm.out7390           TGGT--GT---G--------------------------------------
GCA_000004655.2_ASM465v1_rm.out7410           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7411           AAGT--GTGGAGTTGCATTGATTTG-TGTTC----TTACTTGTACCTCCA
GCA_000004655.2_ASM465v1_rm.out7425           GAGTGT--GTGT-CCTG--------------------AGTTATACCCTTC
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           GAATGC--GGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGTACCTTTA
GCA_000004655.2_ASM465v1_rm.out7474           GAGT--GCGGT-GTGTGTTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out7499           GAGT--GAATT-GAGT--TCTTCTA-CGTGC---TTAC-ATGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out7506           ACAC--AC----GCG------TG---------------------------
GCA_000004655.2_ASM465v1_rm.out7507           GAGTGT--GGTG-TATGTGAGTGTG-CGTT----CTGAGTTGTACCCCTT
GCA_000004655.2_ASM465v1_rm.out7613           GAGT--GCGGTG-TGTGTAAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000004655.2_ASM465v1_rm.out7679           GAGTGCGGTGTG-TGTTCTCGTGTG-CGTT----CTGAGTTGTACCCTCT
GCA_000004655.2_ASM465v1_rm.out7680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   GAGT--GTGGA-GTGAGTTCATGTG-TGCAT---CCTCATTGTACTCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   GAGTGTGGTGTA-TATTTG--TGTG-CGTC----CTAAGTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   CTAAATCCTAGTGTGTGTTAG-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   GAGT--ATGAA-GTGA--GTTTGTG-TGTCT---TCCT-ATGTATCTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   GAGT--GTGGTG-TGTGAGT--GTG-CGTC----CTAAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   GAGTGT--GGTG-TATGTGAGTGTG-CGTT----CTGACTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   GAAT--GTGGTG-TGTGTAAGTGTG-CGTC----CTGAATTGTACTCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   ATAC--AGGGACACACACTTACACG-CGTG----GTGTGTGTAAGTGTGC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   TGCA--TG---GGTGGTGTGATGTG-TGTAC---GTCCTTTGTAT-CCTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   GTT--------------TTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   GAGTGT--AGTG-TATGTAAGTGTG-CGTT----CTGAGTTGTACCCCTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   GCAC--AC----ACG------CGTG-CGCG--------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   GA-------------GTGCGGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   TGA----C---TGTGGAGTGTAT---------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   ------------------------G-CGTC----ATGAGTTGTACCTTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   TGTG--ATGTG-GTGTGTTCGTGAG-CGTC----CTAAATTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  TGTGTATAAGTG-TGTATTCCCTTC-TAAA----AAAA------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  GAGTGTGATGTG-TGTTCTCGTGTT-TTTC----CTGAGTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  GAGT--GCGG----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  GAGTGC--GGTG-TGTGTAAGTGTG-CTTT----CTGAGTTCTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  GAGT--GTGGT-TTGCATGAATGT---GTGT---CCTAATTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  GAGT--GTGGA-GTGAGTTCGTGCG-TGCGT---CGTCGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  GAGT--GTGGTG-TGTGTTAGTGTG-CGTC----CTGTGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  GAGT--GCGGTG-TGTGTAAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  GAGTGT--GGTA-TGTGTTAGTGTG-CATT----CTGAGTTGTACCCTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  -----------------AAAGTGTG-TACC----CTAAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  AAAG--TGTG----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  AAGT--GTGGAGTTGCATTGATTTG-TGTTC----TTACTTGTACCTCCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  GAGT--GTGATG-TGTGTTCGCATG-CACC----CTGAATCGCACCCTTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  GAGT--GTGATG-TGTGTTTGCATG-TACC----CTGAATCG--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  GAGT--GTGGTG-TGTGTAAG-----------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  -------------TGTGTAAGTGTA-CGTC----CTGAGTTGTTGCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  TTATACCCTCTC-AAGGAAA------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  GAGTGT--GGAG-TGAGTTCGTGTG-TGTC----CTTAGTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  GAGTGC--GGTG-TGTGTAAGTGTG-CGTC----TTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  GAGT--GCGGTG-TGTGTAAGTGTG-CGT---------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  GCGT--GTGACCGTGTGTTGATCAG-TGTGC---ATCCAATTGTACTCAC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  TGGT--GT---G--------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  GAGTGT--GTGT-CCTG--------------------AGTTATACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  GAGT--GCGGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  TGTTGT--GATG-TGAATGAGTATG-CTTC----ATGAGTTGCATCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  TCTC--ATTCC-TAGCGTGTGTATG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  GAGC--GTGGT-GTGTGTACGTGTA-CGTC----CTAATTTGCAACTTAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  AAGT--AC----ACATG----TTCG-C--G----CGTTGTTG--------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  -----T--AGTG-TGTGTTAGTGTG-TGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  GTG----T---GTGCAAGTCGTGTG-CAT-C---CTACTTTTACC-TCTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  GAGTGC--AGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGTACCCTTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  TGGT--GTGGT-GTGCATGCATGCA-CATCCTCCTTTGTACGTACCCTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  GCAC--TG------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  GATTGTGATG-----TGTGAGTATG-CGTT----CTGAGTTGTTTCCTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  GAGTGT--GGTG-TGTGTATGTGTG-------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  GTGT--------------TCGTGTG-CGTC----CTGATTTGTAACCTCC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  GAGT--GTGGT-GTGTGTTCATGTG-CGTC----CTGCTTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  GTGT--------------TGTTAGG-CATC----CTGAATTATACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  ------GTGGTA-TGTGTTCGTATG-TGTC----CTGAGTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  GTG----A---AGTGAGTTCATGTG-CATTC---CTAGTTGTACC-CTTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  TGTT--GTGGT-GTGTGTTCGTGTG-AGTT----CTAAATTGTACCCCTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  GCGT--GTGTGG----------GTG-TGTGC---ATCCAATTGTACTTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  GAGT--GCAGTG-TGTGTTAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  -------TTGTG-TGTGTTCGTATG-CGTC----TTGAGTTGTACACTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  GAGT--GTGGTG-TGTGTTAGTGTG-CGTC----CTATGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  -TATATGTGGAG-TGAATTCGTGTG-CGTC----CTTAGCTGTACTATCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  GAGT--GTGGT---------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  AAGT--GTGGTG-TGTGTAAGTGTG-CGTC----ATGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  GAGT--GTGAGAGTAAGTTCATGTG-CATC----TTTATATGTACCATTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  GTGT--------------TCTTGTG-CATT----CTGAGTTGTATCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  GAGT--GCGGTG-TGTGTTATTGTA-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  CAGT--GTGGA-GTGTGTTCGTATA-CGTCC---TGGCTTTGTACCCTTG
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  GAGT--GCGGTG-TGTGTAAGTGTA-CTTT----CTGAGTTATACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  CGTG-----------TGTGAGTGTA-CACT----ATGAGTTGTATCCT--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  GTGT--------------TCTTGTG-CTTC----CTGAATTGTATCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  GTGAACTTAGAA-TAAGTTCGTGTG-CGTA----CTTAGTTGTACCTTCA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  GAGT--GTGGTG-TGTGTAAGTGTG-CGTT----ATGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  GAGT--GTAGTG-TGTGTGAGTGTG-CGTC----CTGAGTTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  ----------TG-TGTGTTCGTGTG-CGTC----TTGAGTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  GTGAGTGTTGTG-TGTGTTCGTGTG-CGTT----CTGATTTGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  GAGTGT--GGTG-TCTGTTTGTGCG-TGTC----CTTAATTGTACCCTTA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  GTGAGTGTGGTG-TGTGTAAGTGTG-CATT----CTGAATTGTACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  GAGT--GAATT-GAGT--TCTTCTA-CGTGC---TAAC-ATGTACCCTCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  TGTT--ATG---GTGTGTGAGTGTG-CGTG----CTAAGTTGCACCCTTC
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  TAGTGT--GGTG-TGTGTCTCTGTG-TGTC----CTTGTGGTACCGTTTT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  ATGT--GTGGTG-TGTGTTCATGTG-CATC----CTGAATTTTACTTCCC

GCA_000004655.2_ASM465v1_rm.out279            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out282            CAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out283            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out314            AAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out334            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out335            GAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out359            TCAGAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out360            TAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out384            CAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out445            TAAAAACGTGTGTTGTGATGTGTGTTAGTGTGCGTCCTGAGTTGTACCCT
GCA_000004655.2_ASM465v1_rm.out446            TCAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out526            TCATAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out623            --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out728            TTAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1126           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1295           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1516           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1530           AAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1602           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1610           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1620           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1631           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1760           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out1991           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2140           TTAAAAAAA-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out2165           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2212           TCAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2220           AAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2592           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2593           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2605           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out2897           TAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3002           CAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3174           CAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3194           CAAGAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3391           CAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3393           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3398           AAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3404           CAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3408           AAA-----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3517           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3545           TCTAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3564           AAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3565           AAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3599           TCCAAAAAAA----------------------------------------
GCA_000004655.2_ASM465v1_rm.out3651           CAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3678           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3753           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out3823           TTAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4018           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4019           ACTAAAGAAA----------------------------------------
GCA_000004655.2_ASM465v1_rm.out4044           AAAAAA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4175           AAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4221           TCAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4276           TAAGAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4374           AAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4424           TAAGAA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4604           AAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4610           CAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4611           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4634           TCAGAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4643           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4668           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4741           TAAAAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4896           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out4965           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5278           TTAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5299           TATAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5300           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5374           CAAAAA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5484           AAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5485           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5487           AAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5488           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5579           CAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5620           TAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5750           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out5978           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6259           TCTAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6326           CAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6433           CAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6435           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6436           GAAAAA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6513           AAAA----------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6613           TAGAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6713           TCAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6847           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6881           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out6908           AAAAAA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7151           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7152           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7153           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7154           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7170           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7171           TCAGAAGAA-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out7230           AAAGAAA-------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7376           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7390           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7410           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7411           AAAAA---------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7425           TCAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7471           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7473           AAAAAA--------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7474           TA------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7499           TAAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7506           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7507           CTTAAAAAA-----------------------------------------
GCA_000004655.2_ASM465v1_rm.out7613           TCAAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7679           CATAAAAA------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7680           --------------------------------------------------
GCA_000004655.2_ASM465v1_rm.out7685           --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   CAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   CAAAA---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   AAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   TCAG----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   TTAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   GTCC----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   TCAGAAGAA-----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   TAAAAACGTGTGTTGTGGTGTGTATTAGTGTGCGTCATGAGTTGTACCCT
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   CTTAAAAAA-----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   TCATAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   TTAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   CAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  AAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  TAGAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  AAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  TCAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  TCAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  AAAAAA--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  AAAAA---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  AAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  AAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  TCAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  TCTAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  TCAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  TCAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  AAAAA---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  TAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  AAAAGAGA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  AAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  TTAAAAAAA-----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  AAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  CAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  AAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  CAAGAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  CAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  AAAAAA--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  AAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  TCAAAAAAA-----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  TAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  AAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  TCAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  AAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  TTAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  ACTAAAGAAA----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  AAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  TAAGAA--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  TCAGAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  TAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  TAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  TCAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  CAAAAA--------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  CAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  AAAAA---------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  TAAA----------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  TAAAAAAA------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  TTTAAAAAAA----------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  --------------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  GAAAAAA-------------------------------------------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  TCTAAAAA------------------------------------------

GCA_000004655.2_ASM465v1_rm.out279            ----------
GCA_000004655.2_ASM465v1_rm.out282            ----------
GCA_000004655.2_ASM465v1_rm.out283            ----------
GCA_000004655.2_ASM465v1_rm.out314            ----------
GCA_000004655.2_ASM465v1_rm.out334            ----------
GCA_000004655.2_ASM465v1_rm.out335            ----------
GCA_000004655.2_ASM465v1_rm.out359            ----------
GCA_000004655.2_ASM465v1_rm.out360            ----------
GCA_000004655.2_ASM465v1_rm.out384            ----------
GCA_000004655.2_ASM465v1_rm.out445            TCTAAAAAAA
GCA_000004655.2_ASM465v1_rm.out446            ----------
GCA_000004655.2_ASM465v1_rm.out526            ----------
GCA_000004655.2_ASM465v1_rm.out623            ----------
GCA_000004655.2_ASM465v1_rm.out728            ------AAAA
GCA_000004655.2_ASM465v1_rm.out1126           ----------
GCA_000004655.2_ASM465v1_rm.out1295           ----------
GCA_000004655.2_ASM465v1_rm.out1516           ----------
GCA_000004655.2_ASM465v1_rm.out1530           ----------
GCA_000004655.2_ASM465v1_rm.out1602           ----------
GCA_000004655.2_ASM465v1_rm.out1610           ----------
GCA_000004655.2_ASM465v1_rm.out1620           ----------
GCA_000004655.2_ASM465v1_rm.out1631           ----------
GCA_000004655.2_ASM465v1_rm.out1760           ----------
GCA_000004655.2_ASM465v1_rm.out1991           ----------
GCA_000004655.2_ASM465v1_rm.out2140           ----------
GCA_000004655.2_ASM465v1_rm.out2165           ----------
GCA_000004655.2_ASM465v1_rm.out2212           ----------
GCA_000004655.2_ASM465v1_rm.out2220           ----------
GCA_000004655.2_ASM465v1_rm.out2592           ----------
GCA_000004655.2_ASM465v1_rm.out2593           ----------
GCA_000004655.2_ASM465v1_rm.out2605           ----------
GCA_000004655.2_ASM465v1_rm.out2897           ----------
GCA_000004655.2_ASM465v1_rm.out3002           ----------
GCA_000004655.2_ASM465v1_rm.out3174           ------AAAA
GCA_000004655.2_ASM465v1_rm.out3194           ----------
GCA_000004655.2_ASM465v1_rm.out3391           ------AAAA
GCA_000004655.2_ASM465v1_rm.out3393           ----------
GCA_000004655.2_ASM465v1_rm.out3398           ----------
GCA_000004655.2_ASM465v1_rm.out3404           ----------
GCA_000004655.2_ASM465v1_rm.out3408           ----------
GCA_000004655.2_ASM465v1_rm.out3517           ----------
GCA_000004655.2_ASM465v1_rm.out3545           ----------
GCA_000004655.2_ASM465v1_rm.out3564           ------AAA-
GCA_000004655.2_ASM465v1_rm.out3565           ------AAA-
GCA_000004655.2_ASM465v1_rm.out3599           ----------
GCA_000004655.2_ASM465v1_rm.out3651           ----------
GCA_000004655.2_ASM465v1_rm.out3678           ----------
GCA_000004655.2_ASM465v1_rm.out3680           ----------
GCA_000004655.2_ASM465v1_rm.out3753           ----------
GCA_000004655.2_ASM465v1_rm.out3823           ----------
GCA_000004655.2_ASM465v1_rm.out4018           ----------
GCA_000004655.2_ASM465v1_rm.out4019           ----------
GCA_000004655.2_ASM465v1_rm.out4044           ----------
GCA_000004655.2_ASM465v1_rm.out4175           ----------
GCA_000004655.2_ASM465v1_rm.out4221           ----------
GCA_000004655.2_ASM465v1_rm.out4276           ----------
GCA_000004655.2_ASM465v1_rm.out4374           ----------
GCA_000004655.2_ASM465v1_rm.out4424           ----------
GCA_000004655.2_ASM465v1_rm.out4604           ------AAA-
GCA_000004655.2_ASM465v1_rm.out4610           ----------
GCA_000004655.2_ASM465v1_rm.out4611           ----------
GCA_000004655.2_ASM465v1_rm.out4634           ----------
GCA_000004655.2_ASM465v1_rm.out4643           ----------
GCA_000004655.2_ASM465v1_rm.out4668           ----------
GCA_000004655.2_ASM465v1_rm.out4741           ----------
GCA_000004655.2_ASM465v1_rm.out4896           ----------
GCA_000004655.2_ASM465v1_rm.out4965           ----------
GCA_000004655.2_ASM465v1_rm.out5278           ------AAAA
GCA_000004655.2_ASM465v1_rm.out5299           ----------
GCA_000004655.2_ASM465v1_rm.out5300           ----------
GCA_000004655.2_ASM465v1_rm.out5374           ----------
GCA_000004655.2_ASM465v1_rm.out5484           ----------
GCA_000004655.2_ASM465v1_rm.out5485           ----------
GCA_000004655.2_ASM465v1_rm.out5487           ----------
GCA_000004655.2_ASM465v1_rm.out5488           ----------
GCA_000004655.2_ASM465v1_rm.out5579           ----------
GCA_000004655.2_ASM465v1_rm.out5620           ------AAAA
GCA_000004655.2_ASM465v1_rm.out5750           ----------
GCA_000004655.2_ASM465v1_rm.out5978           ----------
GCA_000004655.2_ASM465v1_rm.out6259           ----------
GCA_000004655.2_ASM465v1_rm.out6326           ----------
GCA_000004655.2_ASM465v1_rm.out6433           ------AAAA
GCA_000004655.2_ASM465v1_rm.out6435           ----------
GCA_000004655.2_ASM465v1_rm.out6436           ----------
GCA_000004655.2_ASM465v1_rm.out6513           ------AAA-
GCA_000004655.2_ASM465v1_rm.out6613           ----------
GCA_000004655.2_ASM465v1_rm.out6713           ----------
GCA_000004655.2_ASM465v1_rm.out6847           ----------
GCA_000004655.2_ASM465v1_rm.out6881           ----------
GCA_000004655.2_ASM465v1_rm.out6908           ----------
GCA_000004655.2_ASM465v1_rm.out7151           ----------
GCA_000004655.2_ASM465v1_rm.out7152           ----------
GCA_000004655.2_ASM465v1_rm.out7153           ----------
GCA_000004655.2_ASM465v1_rm.out7154           ----------
GCA_000004655.2_ASM465v1_rm.out7170           ----------
GCA_000004655.2_ASM465v1_rm.out7171           ----------
GCA_000004655.2_ASM465v1_rm.out7230           ----------
GCA_000004655.2_ASM465v1_rm.out7376           ----------
GCA_000004655.2_ASM465v1_rm.out7390           ----------
GCA_000004655.2_ASM465v1_rm.out7410           ----------
GCA_000004655.2_ASM465v1_rm.out7411           ----------
GCA_000004655.2_ASM465v1_rm.out7425           ----------
GCA_000004655.2_ASM465v1_rm.out7471           ----------
GCA_000004655.2_ASM465v1_rm.out7473           ----------
GCA_000004655.2_ASM465v1_rm.out7474           ----------
GCA_000004655.2_ASM465v1_rm.out7499           ----------
GCA_000004655.2_ASM465v1_rm.out7506           ----------
GCA_000004655.2_ASM465v1_rm.out7507           ----------
GCA_000004655.2_ASM465v1_rm.out7613           ----------
GCA_000004655.2_ASM465v1_rm.out7679           ----------
GCA_000004655.2_ASM465v1_rm.out7680           ----------
GCA_000004655.2_ASM465v1_rm.out7685           ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out54    ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out282   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out285   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out286   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out306   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out331   ------AAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out332   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out351   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out357   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out369   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out385   TCTAAAAAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out432   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out433   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out453   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out541   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out651   ------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out909   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out937   ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1008  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1068  ------AAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1160  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1161  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1173  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1187  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1265  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1307  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1420  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1454  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1487  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1488  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1572  ------AA--
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1573  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1666  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1667  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1668  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1737  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1868  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1889  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1919  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1931  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out1972  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2010  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2014  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2308  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2457  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2715  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2783  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2798  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2805  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2816  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2941  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out2942  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3159  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3273  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3307  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3690  ------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3702  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3993  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out3994  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4167  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4183  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4342  ------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4354  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4362  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4392  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4468  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4488  ------AAA-
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4526  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4577  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4594  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4670  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4740  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4929  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out4930  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5061  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5156  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5330  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5486  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5488  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5515  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5530  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5531  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5567  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out5793  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6091  ------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6181  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6219  ------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6261  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6262  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6397  ------AAAA
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6536  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6544  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6684  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out6685  ----------
GCA_000576065.1_Oryza_nivara_v1.0_rm.out7006  ----------
//
