Metadata-Version: 2.1
Name: tidyfasta
Version: 1.0.0
Summary: Sanitise protein FASTA files / data
Home-page: https://github.com/maxhebditch/tidyfasta
Author: Max Hebditch
Author-email: max@maxhebditch.co.uk
License: MIT
Description: # tidyfasta
        
         A python program to tidy and sanitise FASTA sequence files
        
        ## Problems and fixes
        
        | Problem                     | Fix                                     |
        |-----------------------------|-----------------------------------------|
        | Sequence without ID         | ID name added                           |
        | ID without sequence         | Exception raised                        |
        | Multiline sequence          | One line per sequence                   |
        | Non canonical AA            | Exception raise                         |
        | Dangerous characters in ID  | Exception raise                         |
        | Lowercase AA                | Converts to uppercase AA                |
        | Excessive Whitespace        | Removes excessive whitespace            | 
        
        ## Usage
        
            tidyfasta.py --input file.FASTA
            tidyfasta.py --input file.FASTA --single
            tidyfasta.py --input file.FASTA --single --strict
        
        ## Output
        
        1. Tidied version of original file
        
Platform: UNKNOWN
Description-Content-Type: text/markdown
