LICENSE
README.md
pyproject.toml
setup.cfg
deepfinder/__init__.py
deepfinder/inference.py
deepfinder/losses.py
deepfinder/models.py
deepfinder/training.py
deepfinder/bin/__init__.py
deepfinder/bin/annotate.py
deepfinder/bin/cluster.py
deepfinder/bin/display.py
deepfinder/bin/generate_target.py
deepfinder/bin/segment.py
deepfinder/bin/train.py
deepfinder/examples/__init__.py
deepfinder/examples/analyze/__init__.py
deepfinder/examples/analyze/evaluate.py
deepfinder/examples/analyze/step1_launch_segment.py
deepfinder/examples/analyze/step2_launch_clustering.py
deepfinder/examples/analyze/step3_launch_evaluation.py
deepfinder/examples/analyze/in/net_weights_FINAL.h5
deepfinder/examples/analyze/in/particle_locations_model_9.txt
deepfinder/examples/analyze/out/orthoslices_tomo9.png
deepfinder/examples/analyze/out/orthoslices_tomo9_segmentation.png
deepfinder/examples/training/__init__.py
deepfinder/examples/training/step1_generate_target.py
deepfinder/examples/training/step2_launch_training.py
deepfinder/examples/training/in/object_list_tomo0.xml
deepfinder/examples/training/in/object_list_train.xml
deepfinder/examples/training/in/object_list_valid.xml
deepfinder/examples/training/out/net_train_history_plot.png
deepfinder/examples/training/out/net_weights_chlamydomonas.h5
deepfinder/examples/training/out/orthoslices_target_shapes.png
deepfinder/examples/training/out/orthoslices_target_spheres.png
deepfinder/pyqt/__init__.py
deepfinder/pyqt/custom_theme.py
deepfinder/pyqt/annotation/__init__.py
deepfinder/pyqt/annotation/gui_annotation.py
deepfinder/pyqt/annotation/gui_annotation.ui
deepfinder/pyqt/clustering/__init__.py
deepfinder/pyqt/clustering/gui_clustering.py
deepfinder/pyqt/clustering/gui_clustering.ui
deepfinder/pyqt/display/__init__.py
deepfinder/pyqt/display/gui_display.py
deepfinder/pyqt/display/gui_display.ui
deepfinder/pyqt/display/gui_display_interface.py
deepfinder/pyqt/display/widget_display.py
deepfinder/pyqt/generate_target/__init__.py
deepfinder/pyqt/generate_target/gui_target.py
deepfinder/pyqt/generate_target/gui_target.ui
deepfinder/pyqt/segment/__init__.py
deepfinder/pyqt/segment/gui_segment.py
deepfinder/pyqt/segment/gui_segment.ui
deepfinder/pyqt/train/__init__.py
deepfinder/pyqt/train/gui_train.py
deepfinder/pyqt/train/gui_train.ui
deepfinder/pyqt/train/plot_window.py
deepfinder/test/__init__.py
deepfinder/test/utils/__init__.py
deepfinder/test/utils/test_eval.py
deepfinder/utils/__init__.py
deepfinder/utils/common.py
deepfinder/utils/core.py
deepfinder/utils/eval.py
deepfinder/utils/objl.py
deepfinder/utils/params.py
deepfinder/utils/smap.py
em_deepfinder.egg-info/PKG-INFO
em_deepfinder.egg-info/SOURCES.txt
em_deepfinder.egg-info/dependency_links.txt
em_deepfinder.egg-info/entry_points.txt
em_deepfinder.egg-info/requires.txt
em_deepfinder.egg-info/top_level.txt