CHROM	POS	REF	ALT	ANN[*].GENE	ANN[*].GENEID	ANN[*].IMPACT	ANN[*].EFFECT	ANN[*].FEATURE	ANN[*].FEATUREID	ANN[*].BIOTYPE	ANN[*].RANK	ANN[*].HGVS_C	ANN[*].HGVS_P	ANN[*].CDNA_POS	ANN[*].CDNA_LEN	ANN[*].CDS_POS	ANN[*].CDS_LEN	ANN[*].AA_POS	ANN[*].AA_LEN	ANN[*].DISTANCE	EFF[*].EFFECT	EFF[*].FUNCLASS	EFF[*].CODON	EFF[*].AA	EFF[*].AA_LEN
MN908947.3	241	C	T	orf1ab,CHR_START-orf1ab	gene-orf1ab,CHR_START-gene-orf1ab	MODIFIER,MODIFIER	upstream_gene_variant,intergenic_region	transcript,intergenic_region	TRANSCRIPT_gene-orf1ab,CHR_START-gene-orf1ab	protein_coding,.	-1,-1	c.-25C>T,n.241C>T	.,.	-1,-1	-1,-1	-1,-1	-1,-1	-1,-1	-1,-1	25,0	upstream_gene_variant,intergenic_region	NONE,NONE	c.-25C>T,n.241C>T	.,.	-1,-1
MN908947.3	2706	C	T	orf1ab	gene-orf1ab	MODERATE	missense_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.2441C>T	p.Thr814Ile	2441	21290	2441	21290	814	7095	0	missense_variant	NONE	c.2441C>T	p.Thr814Ile	7095
MN908947.3	3037	C	T	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.2772C>T	p.Phe924Phe	2772	21290	2772	21290	924	7095	0	synonymous_variant	NONE	c.2772C>T	p.Phe924Phe	7095
MN908947.3	3768	C	A	orf1ab	gene-orf1ab	MODERATE	missense_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.3503C>A	p.Thr1168Asn	3503	21290	3503	21290	1168	7095	0	missense_variant	NONE	c.3503C>A	p.Thr1168Asn	7095
MN908947.3	9721	T	C	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.9456T>C	p.His3152His	9456	21290	9456	21290	3152	7095	0	synonymous_variant	NONE	c.9456T>C	p.His3152His	7095
MN908947.3	12025	C	T	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.11760C>T	p.Ser3920Ser	11760	21290	11760	21290	3920	7095	0	synonymous_variant	NONE	c.11760C>T	p.Ser3920Ser	7095
MN908947.3	12514	G	T	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.12249G>T	p.Thr4083Thr	12249	21290	12249	21290	4083	7095	0	synonymous_variant	NONE	c.12249G>T	p.Thr4083Thr	7095
MN908947.3	12514	G	T	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.12249G>T	p.Thr4083Thr	12249	21290	12249	21290	4083	7095	0	synonymous_variant	NONE	c.12249G>T	p.Thr4083Thr	7095
MN908947.3	12748	T	C	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.12483T>C	p.Thr4161Thr	12483	21290	12483	21290	4161	7095	0	synonymous_variant	NONE	c.12483T>C	p.Thr4161Thr	7095
MN908947.3	13356	C	T	orf1ab	gene-orf1ab	MODERATE	missense_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.13091C>T	p.Thr4364Ile	13091	21290	13091	21290	4364	7095	0	missense_variant	NONE	c.13091C>T	p.Thr4364Ile	7095
MN908947.3	14408	C	T	orf1ab	gene-orf1ab	LOW	synonymous_variant	transcript	TRANSCRIPT_gene-orf1ab	protein_coding	1	c.14143C>T	p.Leu4715Leu	14143	21290	14143	21290	4715	7095	0	synonymous_variant	NONE	c.14143C>T	p.Leu4715Leu	7095
MN908947.3	17331	G	T	orf1ab,S	gene-orf1ab,gene-S	MODERATE,MODIFIER	missense_variant,upstream_gene_variant	transcript,transcript	TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S	protein_coding,protein_coding	1,-1	c.17066G>T,c.-4232G>T	p.Arg5689Ile,.	17066,-1	21290,-1	17066,-1	21290,-1	5689,-1	7095,-1	0,4232	missense_variant,upstream_gene_variant	NONE,NONE	c.17066G>T,c.-4232G>T	p.Arg5689Ile,.	7095,-1
MN908947.3	19164	C	T	orf1ab,S	gene-orf1ab,gene-S	MODERATE,MODIFIER	missense_variant,upstream_gene_variant	transcript,transcript	TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S	protein_coding,protein_coding	1,-1	c.18899C>T,c.-2399C>T	p.Thr6300Ile,.	18899,-1	21290,-1	18899,-1	21290,-1	6300,-1	7095,-1	0,2399	missense_variant,upstream_gene_variant	NONE,NONE	c.18899C>T,c.-2399C>T	p.Thr6300Ile,.	7095,-1
MN908947.3	19839	T	C	orf1ab,S	gene-orf1ab,gene-S	MODERATE,MODIFIER	missense_variant,upstream_gene_variant	transcript,transcript	TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S	protein_coding,protein_coding	1,-1	c.19574T>C,c.-1724T>C	p.Ile6525Thr,.	19574,-1	21290,-1	19574,-1	21290,-1	6525,-1	7095,-1	0,1724	missense_variant,upstream_gene_variant	NONE,NONE	c.19574T>C,c.-1724T>C	p.Ile6525Thr,.	7095,-1
MN908947.3	19955	C	T	orf1ab,S	gene-orf1ab,gene-S	LOW,MODIFIER	synonymous_variant,upstream_gene_variant	transcript,transcript	TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S	protein_coding,protein_coding	1,-1	c.19690C>T,c.-1608C>T	p.Leu6564Leu,.	19690,-1	21290,-1	19690,-1	21290,-1	6564,-1	7095,-1	0,1608	synonymous_variant,upstream_gene_variant	NONE,NONE	c.19690C>T,c.-1608C>T	p.Leu6564Leu,.	7095,-1
MN908947.3	21220	G	T	orf1ab,S,ORF3a	gene-orf1ab,gene-S,gene-ORF3a	LOW,MODIFIER,MODIFIER	synonymous_variant,upstream_gene_variant,upstream_gene_variant	transcript,transcript,transcript	TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a	protein_coding,protein_coding,protein_coding	1,-1,-1	c.20955G>T,c.-343G>T,c.-4173G>T	p.Ser6985Ser,.,.	20955,-1,-1	21290,-1,-1	20955,-1,-1	21290,-1,-1	6985,-1,-1	7095,-1,-1	0,343,4173	synonymous_variant,upstream_gene_variant,upstream_gene_variant	NONE,NONE,NONE	c.20955G>T,c.-343G>T,c.-4173G>T	p.Ser6985Ser,.,.	7095,-1,-1
MN908947.3	23403	A	G	S,ORF3a,E,M,ORF6,ORF7a,ORF8,N,orf1ab	gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8,gene-N,gene-orf1ab	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8,TRANSCRIPT_gene-N,TRANSCRIPT_gene-orf1ab	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.1841A>G,c.-1990A>G,c.-2842A>G,c.-3120A>G,c.-3799A>G,c.-3991A>G,c.-4491A>G,c.-4871A>G,c.*1848A>G	p.Asp614Gly,.,.,.,.,.,.,.,.	1841,-1,-1,-1,-1,-1,-1,-1,-1	3822,-1,-1,-1,-1,-1,-1,-1,-1	1841,-1,-1,-1,-1,-1,-1,-1,-1	3822,-1,-1,-1,-1,-1,-1,-1,-1	614,-1,-1,-1,-1,-1,-1,-1,-1	1273,-1,-1,-1,-1,-1,-1,-1,-1	0,1990,2842,3120,3799,3991,4491,4871,1848	missense_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.1841A>G,c.-1990A>G,c.-2842A>G,c.-3120A>G,c.-3799A>G,c.-3991A>G,c.-4491A>G,c.-4871A>G,c.*1848A>G	p.Asp614Gly,.,.,.,.,.,.,.,.	1273,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	23707	C	T	S,ORF3a,E,M,ORF6,ORF7a,ORF8,N,orf1ab	gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8,gene-N,gene-orf1ab	LOW,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	synonymous_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8,TRANSCRIPT_gene-N,TRANSCRIPT_gene-orf1ab	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.2145C>T,c.-1686C>T,c.-2538C>T,c.-2816C>T,c.-3495C>T,c.-3687C>T,c.-4187C>T,c.-4567C>T,c.*2152C>T	p.Pro715Pro,.,.,.,.,.,.,.,.	2145,-1,-1,-1,-1,-1,-1,-1,-1	3822,-1,-1,-1,-1,-1,-1,-1,-1	2145,-1,-1,-1,-1,-1,-1,-1,-1	3822,-1,-1,-1,-1,-1,-1,-1,-1	715,-1,-1,-1,-1,-1,-1,-1,-1	1273,-1,-1,-1,-1,-1,-1,-1,-1	0,1686,2538,2816,3495,3687,4187,4567,2152	synonymous_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.2145C>T,c.-1686C>T,c.-2538C>T,c.-2816C>T,c.-3495C>T,c.-3687C>T,c.-4187C>T,c.-4567C>T,c.*2152C>T	p.Pro715Pro,.,.,.,.,.,.,.,.	1273,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	25906	G	T	ORF3a,E,M,ORF6,ORF7a,ORF8,N,ORF10,orf1ab,S	gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8,gene-N,gene-ORF10,gene-orf1ab,gene-S	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8,TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1,-1	c.514G>T,c.-339G>T,c.-617G>T,c.-1296G>T,c.-1488G>T,c.-1988G>T,c.-2368G>T,c.-3652G>T,c.*4351G>T,c.*522G>T	p.Gly172Cys,.,.,.,.,.,.,.,.,.	514,-1,-1,-1,-1,-1,-1,-1,-1,-1	828,-1,-1,-1,-1,-1,-1,-1,-1,-1	514,-1,-1,-1,-1,-1,-1,-1,-1,-1	828,-1,-1,-1,-1,-1,-1,-1,-1,-1	172,-1,-1,-1,-1,-1,-1,-1,-1,-1	275,-1,-1,-1,-1,-1,-1,-1,-1,-1	0,339,617,1296,1488,1988,2368,3652,4351,522	missense_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.514G>T,c.-339G>T,c.-617G>T,c.-1296G>T,c.-1488G>T,c.-1988G>T,c.-2368G>T,c.-3652G>T,c.*4351G>T,c.*522G>T	p.Gly172Cys,.,.,.,.,.,.,.,.,.	275,-1,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	25936	C	T	ORF3a,E,M,ORF6,ORF7a,ORF8,N,ORF10,orf1ab,S	gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8,gene-N,gene-ORF10,gene-orf1ab,gene-S	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8,TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-orf1ab,TRANSCRIPT_gene-S	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1,-1	c.544C>T,c.-309C>T,c.-587C>T,c.-1266C>T,c.-1458C>T,c.-1958C>T,c.-2338C>T,c.-3622C>T,c.*4381C>T,c.*552C>T	p.His182Tyr,.,.,.,.,.,.,.,.,.	544,-1,-1,-1,-1,-1,-1,-1,-1,-1	828,-1,-1,-1,-1,-1,-1,-1,-1,-1	544,-1,-1,-1,-1,-1,-1,-1,-1,-1	828,-1,-1,-1,-1,-1,-1,-1,-1,-1	182,-1,-1,-1,-1,-1,-1,-1,-1,-1	275,-1,-1,-1,-1,-1,-1,-1,-1,-1	0,309,587,1266,1458,1958,2338,3622,4381,552	missense_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.544C>T,c.-309C>T,c.-587C>T,c.-1266C>T,c.-1458C>T,c.-1958C>T,c.-2338C>T,c.-3622C>T,c.*4381C>T,c.*552C>T	p.His182Tyr,.,.,.,.,.,.,.,.,.	275,-1,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	28881	G	A	N,ORF10,S,ORF3a,E,M,ORF6,ORF7a,ORF8	gene-N,gene-ORF10,gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.608G>A,c.-677G>A,c.*3497G>A,c.*2661G>A,c.*2409G>A,c.*1690G>A,c.*1494G>A,c.*1122G>A,c.*622G>A	p.Arg203Lys,.,.,.,.,.,.,.,.	608,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	608,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	203,-1,-1,-1,-1,-1,-1,-1,-1	419,-1,-1,-1,-1,-1,-1,-1,-1	0,677,3497,2661,2409,1690,1494,1122,622	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.608G>A,c.-677G>A,c.*3497G>A,c.*2661G>A,c.*2409G>A,c.*1690G>A,c.*1494G>A,c.*1122G>A,c.*622G>A	p.Arg203Lys,.,.,.,.,.,.,.,.	419,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	28881	G	A	N,ORF10,S,ORF3a,E,M,ORF6,ORF7a,ORF8	gene-N,gene-ORF10,gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.608G>A,c.-677G>A,c.*3497G>A,c.*2661G>A,c.*2409G>A,c.*1690G>A,c.*1494G>A,c.*1122G>A,c.*622G>A	p.Arg203Lys,.,.,.,.,.,.,.,.	608,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	608,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	203,-1,-1,-1,-1,-1,-1,-1,-1	419,-1,-1,-1,-1,-1,-1,-1,-1	0,677,3497,2661,2409,1690,1494,1122,622	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.608G>A,c.-677G>A,c.*3497G>A,c.*2661G>A,c.*2409G>A,c.*1690G>A,c.*1494G>A,c.*1122G>A,c.*622G>A	p.Arg203Lys,.,.,.,.,.,.,.,.	419,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	28882	G	A	N,ORF10,S,ORF3a,E,M,ORF6,ORF7a,ORF8	gene-N,gene-ORF10,gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8	LOW,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	synonymous_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.609G>A,c.-676G>A,c.*3498G>A,c.*2662G>A,c.*2410G>A,c.*1691G>A,c.*1495G>A,c.*1123G>A,c.*623G>A	p.Arg203Arg,.,.,.,.,.,.,.,.	609,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	609,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	203,-1,-1,-1,-1,-1,-1,-1,-1	419,-1,-1,-1,-1,-1,-1,-1,-1	0,676,3498,2662,2410,1691,1495,1123,623	synonymous_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.609G>A,c.-676G>A,c.*3498G>A,c.*2662G>A,c.*2410G>A,c.*1691G>A,c.*1495G>A,c.*1123G>A,c.*623G>A	p.Arg203Arg,.,.,.,.,.,.,.,.	419,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	28882	G	A	N,ORF10,S,ORF3a,E,M,ORF6,ORF7a,ORF8	gene-N,gene-ORF10,gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8	LOW,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	synonymous_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.609G>A,c.-676G>A,c.*3498G>A,c.*2662G>A,c.*2410G>A,c.*1691G>A,c.*1495G>A,c.*1123G>A,c.*623G>A	p.Arg203Arg,.,.,.,.,.,.,.,.	609,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	609,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	203,-1,-1,-1,-1,-1,-1,-1,-1	419,-1,-1,-1,-1,-1,-1,-1,-1	0,676,3498,2662,2410,1691,1495,1123,623	synonymous_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.609G>A,c.-676G>A,c.*3498G>A,c.*2662G>A,c.*2410G>A,c.*1691G>A,c.*1495G>A,c.*1123G>A,c.*623G>A	p.Arg203Arg,.,.,.,.,.,.,.,.	419,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	28883	G	C	N,ORF10,S,ORF3a,E,M,ORF6,ORF7a,ORF8	gene-N,gene-ORF10,gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.610G>C,c.-675G>C,c.*3499G>C,c.*2663G>C,c.*2411G>C,c.*1692G>C,c.*1496G>C,c.*1124G>C,c.*624G>C	p.Gly204Arg,.,.,.,.,.,.,.,.	610,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	610,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	204,-1,-1,-1,-1,-1,-1,-1,-1	419,-1,-1,-1,-1,-1,-1,-1,-1	0,675,3499,2663,2411,1692,1496,1124,624	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.610G>C,c.-675G>C,c.*3499G>C,c.*2663G>C,c.*2411G>C,c.*1692G>C,c.*1496G>C,c.*1124G>C,c.*624G>C	p.Gly204Arg,.,.,.,.,.,.,.,.	419,-1,-1,-1,-1,-1,-1,-1,-1
MN908947.3	28883	G	C	N,ORF10,S,ORF3a,E,M,ORF6,ORF7a,ORF8	gene-N,gene-ORF10,gene-S,gene-ORF3a,gene-E,gene-M,gene-ORF6,gene-ORF7a,gene-ORF8	MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript,transcript	TRANSCRIPT_gene-N,TRANSCRIPT_gene-ORF10,TRANSCRIPT_gene-S,TRANSCRIPT_gene-ORF3a,TRANSCRIPT_gene-E,TRANSCRIPT_gene-M,TRANSCRIPT_gene-ORF6,TRANSCRIPT_gene-ORF7a,TRANSCRIPT_gene-ORF8	protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding,protein_coding	1,-1,-1,-1,-1,-1,-1,-1,-1	c.610G>C,c.-675G>C,c.*3499G>C,c.*2663G>C,c.*2411G>C,c.*1692G>C,c.*1496G>C,c.*1124G>C,c.*624G>C	p.Gly204Arg,.,.,.,.,.,.,.,.	610,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	610,-1,-1,-1,-1,-1,-1,-1,-1	1260,-1,-1,-1,-1,-1,-1,-1,-1	204,-1,-1,-1,-1,-1,-1,-1,-1	419,-1,-1,-1,-1,-1,-1,-1,-1	0,675,3499,2663,2411,1692,1496,1124,624	missense_variant,upstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant,downstream_gene_variant	NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE,NONE	c.610G>C,c.-675G>C,c.*3499G>C,c.*2663G>C,c.*2411G>C,c.*1692G>C,c.*1496G>C,c.*1124G>C,c.*624G>C	p.Gly204Arg,.,.,.,.,.,.,.,.	419,-1,-1,-1,-1,-1,-1,-1,-1
