Metadata-Version: 2.1
Name: psicalc
Version: 0.0.9
Summary: Algorithm for clustering protein multiple sequence alignments using normalized mutual information.
Home-page: https://github.com/mandosoft/psi-calc
Author: Thomas Townsley
Author-email: thomas@mandosoft.dev
License: UNKNOWN
Description: # Psi-Calc
        
        This is a package for clustering Multiple Sequence Alignments (MSAs) utilizing normalized mutual information as a measure of relative strength. For more details visit: https://github.com/mandosoft/psi-calc.
        
        As an example:
        
        ```
        import psicalc as pc
        
        file = "<your_fasta_file>" # e.g "PF02517_seed.txt"
        
        data = pc.read_txt_file_format(file) # read Fasta file
        
        pc.find_clusters(7, data) # will sample every 7th column
        ```
        
        The program will run and return a csv file with the strongest clusters found in the MSA provided.
        
Keywords: bioinformatics
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6
Description-Content-Type: text/markdown
