LICENSE
MANIFEST.in
README.md
build.sh
setup.py
.eggs/README.txt
.vscode/.ropeproject/config.py
.vscode/.ropeproject/objectdb
doc/images/output_example.png
doc/images/paralog_freq.png
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phylopypruner/VERSION
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phylopypruner/__init__.pyc
phylopypruner/__main__.py
phylopypruner/decontamination.py
phylopypruner/fasta.py
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phylopypruner/gene_partition.py
phylopypruner/log.py
phylopypruner/mask_monophylies.py
phylopypruner/msa.py
phylopypruner/newick.py
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phylopypruner/prune_paralogs.py
phylopypruner/report.py
phylopypruner/root.py
phylopypruner/run.py
phylopypruner/sequence.py
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phylopypruner/summary.py
phylopypruner/supermatrix.py
phylopypruner/taxonomic_groups.py
phylopypruner/tree_node.py
phylopypruner/tree_stats.py
phylopypruner-1.1.3/LICENSE
phylopypruner-1.1.3/MANIFEST.in
phylopypruner-1.1.3/README.md
phylopypruner-1.1.3/build.sh
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