LICENSE.md
MANIFEST.in
README.md
pyproject.toml
setup.py
cobrakbase/AbstractHandleClient.py
cobrakbase/__init__.py
cobrakbase/exceptions.py
cobrakbase/kbase_object_info.py
cobrakbase/kbase_workspace.py
cobrakbase/kbaseapi.py
cobrakbase/kbaseapi_cache.py
cobrakbase.egg-info/PKG-INFO
cobrakbase.egg-info/SOURCES.txt
cobrakbase.egg-info/dependency_links.txt
cobrakbase.egg-info/requires.txt
cobrakbase.egg-info/top_level.txt
cobrakbase.egg-info/zip-safe
cobrakbase/Workspace/WorkspaceClient.py
cobrakbase/Workspace/__init__.py
cobrakbase/Workspace/authclient.py
cobrakbase/Workspace/baseclient.py
cobrakbase/core/__init__.py
cobrakbase/core/build_metabolic_model.py
cobrakbase/core/cobra_to_kbase.py
cobrakbase/core/converters.py
cobrakbase/core/fba_utilities.py
cobrakbase/core/kbase_fba_builder.py
cobrakbase/core/kbase_model_builder.py
cobrakbase/core/kbase_object_factory.py
cobrakbase/core/kbase_types.py
cobrakbase/core/kbasebiochemmedia.py
cobrakbase/core/kbasefbafba.py
cobrakbase/core/kbasefbatemplate.py
cobrakbase/core/kbasegenomes_feature.py
cobrakbase/core/kbasegenomesgenome.py
cobrakbase/core/kbaseobject.py
cobrakbase/core/model.py
cobrakbase/core/utils.py
cobrakbase/core/kbasebiochem/__init__.py
cobrakbase/core/kbasebiochem/media.py
cobrakbase/core/kbaseclassifier/__init__.py
cobrakbase/core/kbaseclassifier/genomeclassifier.py
cobrakbase/core/kbaseclassifier/genomeclassifiertrainingset.py
cobrakbase/core/kbaseexperiments/__init__.py
cobrakbase/core/kbaseexperiments/attributemapping.py
cobrakbase/core/kbasefba/__init__.py
cobrakbase/core/kbasefba/eschermap.py
cobrakbase/core/kbasefba/fba.py
cobrakbase/core/kbasefba/fbamodel.py
cobrakbase/core/kbasefba/fbamodel_biomass.py
cobrakbase/core/kbasefba/fbamodel_builder.py
cobrakbase/core/kbasefba/fbamodel_from_cobra.py
cobrakbase/core/kbasefba/fbamodel_metabolite.py
cobrakbase/core/kbasefba/fbamodel_protein.py
cobrakbase/core/kbasefba/fbamodel_reaction.py
cobrakbase/core/kbasefba/fbamodel_validator.py
cobrakbase/core/kbasefba/newmodeltemplate.py
cobrakbase/core/kbasefba/newmodeltemplate_builder.py
cobrakbase/core/kbasefba/newmodeltemplate_complex.py
cobrakbase/core/kbasefba/newmodeltemplate_metabolite.py
cobrakbase/core/kbasefba/newmodeltemplate_reaction.py
cobrakbase/core/kbasefba/newmodeltemplate_role.py
cobrakbase/core/kbasefba/newmodeltemplate_validator.py
cobrakbase/core/kbasefba/template_curation.py
cobrakbase/core/kbasefba/template_manipulator.py
cobrakbase/core/kbasefeaturevalues/__init__.py
cobrakbase/core/kbasefeaturevalues/expressionmatrix.py
cobrakbase/core/kbasegenome/__init__.py
cobrakbase/core/kbasegenome/genome.py
cobrakbase/core/kbasegenome/genome_cds_feature.py
cobrakbase/core/kbasegenome/ortholog_family.py
cobrakbase/core/kbasegenome/pangenome.py
cobrakbase/core/kbasematrices/__init__.py
cobrakbase/core/kbasematrices/chemicalabundancematrix.py
cobrakbase/core/kbasematrices/float_matrix_2d.py
cobrakbase/flux_analysis/__init__.py
cobrakbase/flux_analysis/gapfilling.py
cobrakbase/io/__init__.py
cobrakbase/modelseed/__init__.py
cobrakbase/modelseed/hierarchical_ontology.py
cobrakbase/modelseed/modelseed.py
cobrakbase/modelseed/modelseed_builder.py
cobrakbase/modelseed/modelseed_compound.py
cobrakbase/modelseed/modelseed_reaction.py
cobrakbase/modelseed/modelseed_to_cobra.py
cobrakbase/modelseed/seed_object.py
cobrakbase/modelseed/stoich_integration.py
cobrakbase/modelseed/transporters.py
cobrakbase/modelseed/utils.py
test/test.py