Metadata-Version: 2.1
Name: astrometry
Version: 1.0.0
Summary: Astrometry.net solver interface
Home-page: https://github.com/neuromorphicsystems/astrometry
Author: ICNS, Alexandre Marcireau
Author-email: alexandre.marcireau@gmail.com
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Description-Content-Type: text/markdown
License-File: LICENSE

- [Astrometry](#astrometry)
- [Get started](#get-started)
- [Examples](#examples)
  - [Provide size and position hints](#provide-size-and-position-hints)
  - [Print progress information (download and solve)](#print-progress-information-download-and-solve)
  - [Print field stars metadata](#print-field-stars-metadata)
  - [Calculate field stars pixel positions with astropy](#calculate-field-stars-pixel-positions-with-astropy)
  - [Print series description and size (without downloading them)](#print-series-description-and-size-without-downloading-them)
- [Documentation](#documentation)
  - [Solver](#solver)
  - [SizeHint](#sizehint)
  - [PositionHint](#positionhint)
  - [Solution](#solution)
  - [Match](#match)
  - [Star](#star)
  - [Series](#series)
- [Contribute](#contribute)
- [Publish](#publish)
- [MSVC compatibility (work in progress)](#msvc-compatibility-work-in-progress)

# Astrometry

Astrometry turns a list of star positions into a pixel-to-sky transformation (WCS) by calling C functions from the Astrometry.net library (https://astrometry.net).

Astrometry.net star index files ("series") are automatically downloaded when required.

This package is useful for solving plates from a Python script, comparing star extraction methods, or hosting a simple local version of Astrometry.net with minimal dependencies. See https://github.com/dam90/astrometry for a more complete self-hosting solution.

Unlike Astrometry.net, Astrometry does not include FITS parsing or image pre-processing algorithms. Stars must be provided as a list of pixel positions.

Linux and macOS are supported but Windows in not (at the moment).

We are not the authors of the Astrometry.net library. You should cite works from https://astrometry.net/biblio.html if you use the Astrometry.net algorithm via this package.

# Get started

```sh
python3 -m pip install astrometry
```

```py
import astrometry

solver = astrometry.Solver(
    astrometry.series_5200.index_files(
        cache_directory="astrometry_cache",
        scales={6},
    )
)

stars = [
    [388.9140568247906, 656.5003281719216],
    [732.9210858972549, 473.66395545775106],
    [401.03459504299843, 253.788113189415],
    [312.6591868096163, 624.7527729425295],
    [694.6844564647456, 606.8371776658344],
    [741.7233477959561, 344.41284826261443],
    [867.3574610200455, 672.014835980283],
    [1063.546651153479, 593.7844603550848],
    [286.69070190952704, 422.170016812049],
    [401.12779619355155, 16.13543616977013],
    [205.12103484692776, 698.1847350789413],
    [202.88444768690894, 111.24830187635557],
    [339.1627757703069, 86.60739435924549],
]

solution = solver.solve(
    stars_xs=[star[0] for star in stars],
    stars_ys=[star[1] for star in stars],
    size_hint=None,
    position_hint=None,
    solve_id=None,
    tune_up_logodds_threshold=14.0,
    output_logodds_threshold=21.0,
)

if solution.has_match():
    print(f"{solution.best_match().center_ra_deg=}")
    print(f"{solution.best_match().center_dec_deg=}")
    print(f"{solution.best_match().scale_arcsec_per_pixel=}")
```

`solve` is thread-safe. It can be called any number of times from the same `Solver` object.

# Examples

## Provide size and position hints

```py
import astrometry

solver = ...
solution = solver.solve(
    stars_xs=...,
    stars_ys=...,
    size_hint=astrometry.SizeHint(
        lower_arcsec_per_pixel=1.0,
        upper_arcsec_per_pixel=2.0,
    ),
    position_hint=astrometry.PositionHint(
        ra_deg=65.7,
        dec_deg=36.2,
        radius_deg=1.0,
    ),
    solve_id=...,
    tune_up_logodds_threshold=...,
    output_logodds_threshold=...,
)
```

## Print progress information (download and solve)

```py
import astrometry
import logging

logging.getLogger().setLevel(logging.INFO)

solver = ...
solution = ...
```

## Print field stars metadata

Astrometry extracts metadata from the star index ("series"). See [Series](#series) for a description of the available data.

```py
import astrometry

solver = ...
solution = ...

if solution.has_match():
    for star in solution.best_match().stars:
        print(f"{star.ra_deg}º, {star.dec_deg}º:", star.metadata)
```

## Calculate field stars pixel positions with astropy

```py
import astrometry
import astropy.wcs

solver = ...
solution = ...

if solution.has_match():
    wcs = astropy.wcs.WCS(solution.best_match().wcs_fields)
    pixels = wcs.all_world2pix(
        [[star.ra_deg, star.dec_deg] for star in solution.best_match().stars],
        0,
    )
    # pixels is a len(solution.best_match().stars) x 2 numpy array of float values
```

`astropy.wcs.WCS` provides many more functions to probe the transformation properties and convert from and to pixel coordinates. See https://docs.astropy.org/en/stable/api/astropy.wcs.WCS.html for details.

## Print series description and size (without downloading them)

```py
import astrometry

print(astrometry.series_5200_heavy.description)
print(astrometry.series_5200_heavy.size_as_string({2, 3, 4}))
```

See [Series](#series) for a list of available series.

# Documentation

## Solver

```py
class Solver:
    def __init__(self, index_files: list[pathlib.Path]): ...

    def solve(
        self,
        stars_xs: typing.Iterable[float],
        stars_ys: typing.Iterable[float],
        size_hint: typing.Optional[SizeHint],
        position_hint: typing.Optional[PositionHint],
        solve_id: typing.Optional[str],
        tune_up_logodds_threshold: float,
        output_logodds_threshold: float,
    ) -> Solution: ...
```

`solve` is thread-safe and can be called any number of times.

-   `index_files`: List of index files to use for solving. The list need not come from a `Series` object. Series subsets and combinations are possible as well.
-   `star_xs`: First pixel coordinate of the input stars.
-   `star_ys`: Second pixel coordinate of the input stars, must have the same length as `star_xs`.
-   `size_hint`: Optional angular pixel size range ([SizeHint](#sizehint)). Significantly speeds up `solve` when provided. If `size_hint` is `None`, the range `[0.1, 1000.0]` is used. This default range can be changed by setting `astrometry.DEFAULT_LOWER_ARCSEC_PER_PIXEL` and `astrometry.DEFAULT_UPPER_ARCSEC_PER_PIXEL` to other values.
-   `position_hint`: Optional field center Ra/Dec coordinates and error radius ([PositionHint](#positionhint)). Significantly speeds up `solve` when provided. If `position_hint` is None, the entire sky is used (`radius_deg = 180.0`).
-   `solve_id`: Optional plate identifier used in logging messages. If `solve_id` is `None`, it is automatically assigned to a unique integer. The value can be retrieved from the Solution object (`solution.solve_id`).
-   `tune_up_logodds_threshold`: Matches whose log-odds are larger than this value are tuned-up (SIP distortion estimation) and accepted if heir post-tune-up log-odds are larger than `output_logodds_threshold`. The default Astrometry.net value is `math.log(1e6)`.
-   `output_logodds_threshold`: Matches whose log-odds are larger than this value are immediately accepted (added to the solution matches). The default Astrometry.net value is `math.log(1e9)`.

Accepted matches are always tuned up, even if they hit `tune_up_logodds_threshold` and were already tuned-up. Since log-odds are compared with the thresholds before the tune-up, the final log-odds are often significantly larger than `output_logodds_threshold`.

Set `tune_up_logodds_threshold` to a value larger than or equal to `output_logodds_threshold` to disable the first tune-up.

Astrometry.net gives the following description of the tune-up algorithm. See `tweak2` in _astrometry.net/solver/tweak2.c_ for the implementation.

> Given an initial WCS solution, compute SIP polynomial distortions using an annealing-like strategy. That is, it finds matches between image and reference catalog by searching within a radius, and that radius is small near a region of confidence, and grows as you move away. That makes it possible to pick up more distant matches, but they are downweighted in the fit. The annealing process reduces the slope of the growth of the matching radius with respect to the distance from the region of confidence.
>
> -- _astrometry.net/include/astrometry/tweak2.h_

## SizeHint

```py
@dataclasses.dataclass
class SizeHint:
    lower_arcsec_per_pixel: float
    upper_arcsec_per_pixel: float
```

`lower_arcsec_per_pixel` and `upper_arcsec_per_pixel` must be larger than `0` and `upper_arcsec_per_pixel` must be smaller than or equal to `upper_arcsec_per_pixel`.

## PositionHint

```py
@dataclasses.dataclass
class PositionHint:
    ra_deg: float
    dec_deg: float
    radius_deg: float
```

-   `ra_deg` must be in the range `[0.0, 360.0[`.
-   `dec_deg` must be in the range `[-90.0, 90.0]`.
-   `radius` must be larger than or equal to zero.

All values are in degrees and must use the same frame of reference as the index files. Astrometry.net index files use J2000 FK5 (https://docs.astropy.org/en/stable/api/astropy.coordinates.FK5.html). ICRS and FK5 differ by less than 0.1 arcsec (https://www.iers.org/IERS/EN/Science/ICRS/ICRS.html).

## Solution

```py
@dataclasses.dataclass
class Solution:
    solve_id: str
    matches: list[Match]

    def has_match(self) -> bool: ...

    def best_match(self) -> Match: ...
```

`matches` are sorted in descending log-odds order. `best_match` returns the first match in the list.

## Match

```py
@dataclasses.dataclass
class Match:
    logodds: float
    center_ra_deg: float
    center_dec_deg: float
    scale_arcsec_per_pixel: float
    index_path: pathlib.Path
    stars: tuple[Star, ...]
    quad_stars: tuple[Star, ...]
    wcs_fields: dict[str, tuple[typing.Any, str]]
```

-   `logodds`: Log-odds (https://en.wikipedia.org/wiki/Logit) of the match.
-   `center_ra_deg`: Right ascension of the stars bounding box's center, in degrees and in the frame of reference of the index (J200 FK5 for Astrometry.net series).
-   `center_dec_deg`: Declination of the stars bounding box's center in degrees and in the frame of reference of the index (J200 FK5 for Astrometry.net series).
-   `scale_arcsec_per_pixel`: Pixel scale in arcsec per pixel.
-   `index_path`: File system path of the index file used for this match.
-   `stars`: List of visible index stars. This list is almost certainly going to differ from the input stars list.
-   `quad_stars`: The index stars subset (usually 4 but can be 3 or 5) used in the hash code search step (see https://arxiv.org/pdf/0910.2233.pdf, 2. Methods).
-   `wcs_fields`: WCS fields describing the transformation between pixel coordinates and world coordinates. This dictionary can be passed directly to `astropy.wcs.WCS`.

## Star

```py
@dataclasses.dataclass
class Star:
    ra_deg: float
    dec_deg: float
    metadata: dict[str, typing.Any]
```

`ra_deg` and `dec_deg` are in degrees and use the same frame of reference as the index files. Astrometry.net index files use J2000 FK5 (https://docs.astropy.org/en/stable/api/astropy.coordinates.FK5.html). ICRS and FK5 differ by less than 0.1 arcsec (https://www.iers.org/IERS/EN/Science/ICRS/ICRS.html).

The contents of `metadata` depend on the data available in index files. See [Series](#series) for details.

## Series

```py
@dataclasses.dataclass
class Series:
    name: str
    description: str
    scale_to_sizes: dict[int, tuple[int, ...]]
    url_pattern: str

    def size(self, scales: typing.Optional[set[int]] = None): ...

    def size_as_string(self, scales: typing.Optional[set[int]] = None): ...

    def index_files(
        self,
        cache_directory: typing.Union[bytes, str, os.PathLike],
        scales: typing.Optional[set[int]] = None,
    ) -> list[pathlib.Path]: ...
```

-   `name` defines the cache subdirectory name.
-   `description` is a copy of the text description in http://data.astrometry.net.
-   `scale_to_sizes` maps each available HEALPix resolution to index files sizes in bytes. The smaller the scale, the larger the number of HEALPix subdivisions.
-   `url_pattern` is the base pattern used to generate file download links.
-   `size` returns the cumulative file sizes for the given scales in bytes. If `scales` is `None`, all the scales available for the series are used.
-   `size_as_string` returns a human-readable string representation of `size`.
-   `index_files` returns index files paths for the given scales (or all available scales if `scales` is `None`). This function downloads files that are not already in the cache directory. `cache_directory` is created if it does not exist. Download automatically resumes for partially downloaded files.

Change the constants `astrometry.CHUNK_SIZE`, `astrometry.DOWNLOAD_SUFFIX` and `astrometry.TIMEOUT` to configure the downloader parameters.

The table below lists series sizes and properties (descriptions from http://data.astrometry.net). You can access a series' object with `astrometry.series_{name}` (for example `astrometry.series_4200`).

| Name       | Total&nbsp;size | Scales       | Description                                                                                                                                                                                                                                          | Metadata                                                                                                                                                                                                                                                                                                                                                                                  |
| ---------- | --------------- | ------------ | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4100       | 0.36&nbsp;GB    | [7,&nbsp;19] | built from the Tycho-2 catalog, good for images wider than 1 degree, recommended                                                                                                                                                                     | MAG_BT:&nbsp;float<br />MAG_VT:&nbsp;float<br />MAG_HP:&nbsp;float<br />MAG:&nbsp;float                                                                                                                                                                                                                                                                                                   |
| 4200       | 33.78&nbsp;GB   | [0,&nbsp;19] | built from the near-infared 2MASS survey, runs out of stars at the low end, most users will probably prefer 4100 or 5200                                                                                                                             | j_mag:&nbsp;float                                                                                                                                                                                                                                                                                                                                                                         |
| 5000       | 76.24&nbsp;GB   | [0,&nbsp;7]  | an older version from Gaia-DR2 but without Tycho-2 stars merged in, our belief is that series_5200 will work better than this one                                                                                                                    | source_id:&nbsp;int<br />phot_g_mean_mag:&nbsp;float<br />phot_bp_mean_mag:&nbsp;float<br />phot_rp_mean_mag:&nbsp;float<br />parallax:&nbsp;float<br />parallax_error:&nbsp;float<br />pmra:&nbsp;float<br />pmra_error:&nbsp;float<br />pmdec:&nbsp;float<br />pmdec_error:&nbsp;float<br />ra:&nbsp;float<br />dec:&nbsp;float<br />ref_epoch:&nbsp;float                              |
| 5200       | 36.14&nbsp;GB   | [0,&nbsp;6]  | LIGHT version built from Tycho-2 + Gaia-DR2, good for images narrower than 1 degree, combine with 4100-series for broader scale coverage, the LIGHT version contains smaller files with no additional Gaia-DR2 information tagged along, recommended | -                                                                                                                                                                                                                                                                                                                                                                                         |
| 5200_heavy | 79.67&nbsp;GB   | [0,&nbsp;6]  | HEAVY version same as 5200, but with additional Gaia-DR2 information (magnitude in G, BP, RP, proper motions and parallaxes), handy if you want that extra Gaia information for matched stars                                                        | ra:&nbsp;float<br />dec:&nbsp;float<br />mag:&nbsp;float<br />ref_cat:&nbsp;str<br />ref_id:&nbsp;int<br />pmra:&nbsp;float<br />pmdec:&nbsp;float<br />parallax:&nbsp;float<br />ra_ivar:&nbsp;float<br />dec_ivar:&nbsp;float<br />pmra_ivar:&nbsp;float<br />pmdec_ivar:&nbsp;float<br />parallax_ivar:&nbsp;float<br />phot_bp_mean_mag:&nbsp;float<br />phot_rp_mean_mag:&nbsp;float |
| 6000       | 1.20&nbsp;GB    | [4,&nbsp;6]  | very specialized, uses GALEX Near-UV measurements, and only a narrow range of scales                                                                                                                                                                 | fuv_mag:&nbsp;float<br />nuv_mag:&nbsp;float                                                                                                                                                                                                                                                                                                                                              |
| 6100       | 1.58&nbsp;GB    | [4,&nbsp;6]  | very specialized, uses GALEX Far-UV measurements, and only a narrow range of scales                                                                                                                                                                  | fuv_mag:&nbsp;float<br />nuv_mag:&nbsp;float                                                                                                                                                                                                                                                                                                                                              |

The table below indicates the total file size for each scale (most series have multiple index files per scale).

| Name       | 0             | 1             | 2             | 3            | 4              | 5              | 6              | 7              | 8             | 9             | 10            | 11            | 12           | 13           | 14           | 15             | 16             | 17             | 18             | 19             |
| ---------- | ------------- | ------------- | ------------- | ------------ | -------------- | -------------- | -------------- | -------------- | ------------- | ------------- | ------------- | ------------- | ------------ | ------------ | ------------ | -------------- | -------------- | -------------- | -------------- | -------------- |
| 4100       | -             | -             | -             | -            | -              | -              | -              | 165.00&nbsp;MB | 94.55&nbsp;MB | 49.77&nbsp;MB | 24.87&nbsp;MB | 10.21&nbsp;MB | 5.30&nbsp;MB | 2.73&nbsp;MB | 1.38&nbsp;MB | 740.16&nbsp;kB | 408.96&nbsp;kB | 247.68&nbsp;kB | 187.20&nbsp;kB | 144.00&nbsp;kB |
| 4200       | 14.22&nbsp;GB | 9.25&nbsp;GB  | 5.06&nbsp;GB  | 2.63&nbsp;GB | 1.31&nbsp;GB   | 659.09&nbsp;MB | 328.25&nbsp;MB | 165.44&nbsp;MB | 81.84&nbsp;MB | 41.18&nbsp;MB | 20.52&nbsp;MB | 8.02&nbsp;MB  | 4.17&nbsp;MB | 2.16&nbsp;MB | 1.10&nbsp;MB | 596.16&nbsp;kB | 339.84&nbsp;kB | 213.12&nbsp;kB | 164.16&nbsp;kB | 132.48&nbsp;kB |
| 5000       | 34.79&nbsp;GB | 20.19&nbsp;GB | 10.74&nbsp;GB | 5.44&nbsp;GB | 2.71&nbsp;GB   | 1.36&nbsp;GB   | 676.79&nbsp;MB | 340.73&nbsp;MB | -             | -             | -             | -             | -            | -            | -            | -              | -              | -              | -              | -              |
| 5200       | 17.20&nbsp;GB | 9.49&nbsp;GB  | 4.86&nbsp;GB  | 2.45&nbsp;GB | 1.22&nbsp;GB   | 614.89&nbsp;MB | 307.72&nbsp;MB | -              | -             | -             | -             | -             | -            | -            | -            | -              | -              | -              | -              | -              |
| 5200_heavy | 36.46&nbsp;GB | 21.20&nbsp;GB | 11.29&nbsp;GB | 5.72&nbsp;GB | 2.85&nbsp;GB   | 1.43&nbsp;GB   | 714.56&nbsp;MB | -              | -             | -             | -             | -             | -            | -            | -            | -              | -              | -              | -              | -              |
| 6000       | -             | -             | -             | -            | 892.55&nbsp;MB | 457.66&nbsp;MB | 233.23&nbsp;MB | -              | -             | -             | -             | -             | -            | -            | -            | -              | -              | -              | -              | -              |
| 6100       | -             | -             | -             | -            | 599.33&nbsp;MB | 384.09&nbsp;MB | 214.79&nbsp;MB | -              | -             | -             | -             | -             | -            | -            | -            | -              | -              | -              | -              | -              |

# Contribute

Clone this repository and pull its submodule:

```
git clone --recursive https://github.com/neuromorphicsystems/astrometry.git
cd astrometry
```

or

```
git clone https://github.com/neuromorphicsystems/astrometry.git
cd astrometry
git submodule update --recursive
```

Format the code:

```sh
clang-format -i astrometry_extension/astrometry_extension.c
```

Build a local version:

```sh
python3 -m pip install -e .
# use 'CC="ccache clang" python3 -m pip install -e .' to speed up incremental builds
```

# Publish

1. Bump the version number in _setup.py_.

2. Install Cubuzoa in a different directory (https://github.com/neuromorphicsystems/cubuzoa) to build pre-compiled versions for all major operating systems. Cubuzoa depends on VirtualBox (with its extension pack) and requires about 75 GB of free disk space.

```
cd cubuzoa
python3 -m cubuzoa provision --os '(linux|macos)'
python3 -m cubuzoa build --os '(linux|macos)' --pre /path/to/astrometry/prebuild.py /path/to/astrometry
```

3. Install twine

```
python3 -m pip install twine
```

4. Upload the compiled wheels and the source code to PyPI:

```
python3 prebuild.py
python3 setup.py sdist --dist-dir wheels
python3 -m twine upload wheels/*
```

# MSVC compatibility (work in progress)

-   _fitsbin.c_, _kdtree_internal.c_, _kdtree_internal_fits.c_, _solver.c_: replace Variable Length Arrays (VAL) with \_alloca (`type name[size]` -> `type* name = _alloca(size)`)
-   _fitsbin.c_, _fitsioutils.c_, _fitstable.c_: cast `void*` to `char*` to enable pointer arithmetic
-   _anqfits.c_, _verify.c_: `#define debug(args...)` -> `#define debug(...)`
-   _qfits_time.c_: remove `#include <pwd.h>`
-   _log.h_, _keywords.h_: remove `__attribute__` directives
-   _bl.c_: remove redundant bl.inc and bl_nl.c includes
-   replace all POSIX calls (file IO, network, select...). This requires significant effort when targeting the entire Astrometry.net library. It might be less complicated with Astrometry, which uses only a subset of Astrometry.net.


