LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
versioneer.py
nibabies/VERSION
nibabies/__about__.py
nibabies/__init__.py
nibabies/_version.py
nibabies/_warnings.py
nibabies/config.py
nibabies/conftest.py
nibabies.egg-info/PKG-INFO
nibabies.egg-info/SOURCES.txt
nibabies.egg-info/dependency_links.txt
nibabies.egg-info/entry_points.txt
nibabies.egg-info/requires.txt
nibabies.egg-info/top_level.txt
nibabies/cli/__init__.py
nibabies/cli/parser.py
nibabies/cli/run.py
nibabies/cli/version.py
nibabies/cli/workflow.py
nibabies/data/FreeSurferLabelRemappings.json
nibabies/data/FreeSurferSubcorticalLabelTableLut.txt
nibabies/data/MNIInfant_to_MNI1526NLinAsym.mat
nibabies/data/__init__.py
nibabies/data/antsBrainExtraction_precise.json
nibabies/data/antsBrainExtraction_testing.json
nibabies/data/boilerplate.bib
nibabies/data/itkIdentityTransform.txt
nibabies/data/reports-spec.yml
nibabies/data/sub-01_run-01_echo-1_bold.nii.gz
nibabies/data/sub-01_run-01_echo-2_bold.nii.gz
nibabies/data/sub-01_run-01_echo-3_bold.nii.gz
nibabies/data/t1_to_bold.json
nibabies/data/tpl-MNI152NLin6Asym_res-01_desc-avgwmparc_dseg.nii.gz
nibabies/data/within_subject_t1t2.json
nibabies/data/flirtsch/bbr.sch
nibabies/data/tests/config.toml
nibabies/interfaces/__init__.py
nibabies/interfaces/confounds.py
nibabies/interfaces/freesurfer.py
nibabies/interfaces/gifti.py
nibabies/interfaces/multiecho.py
nibabies/interfaces/nibabel.py
nibabies/interfaces/reports.py
nibabies/interfaces/workbench.py
nibabies/reports/__init__.py
nibabies/reports/core.py
nibabies/utils/__init__.py
nibabies/utils/bids.py
nibabies/utils/confounds.py
nibabies/utils/filtering.py
nibabies/utils/misc.py
nibabies/utils/patches.py
nibabies/utils/telemetry.py
nibabies/utils/validation.py
nibabies/utils/viz.py
nibabies/workflows/__init__.py
nibabies/workflows/base.py
nibabies/workflows/anatomical/__init__.py
nibabies/workflows/anatomical/base.py
nibabies/workflows/anatomical/brain_extraction.py
nibabies/workflows/anatomical/norm.py
nibabies/workflows/anatomical/outputs.py
nibabies/workflows/anatomical/preproc.py
nibabies/workflows/anatomical/registration.py
nibabies/workflows/anatomical/segmentation.py
nibabies/workflows/anatomical/surfaces.py
nibabies/workflows/bold/__init__.py
nibabies/workflows/bold/alignment.py
nibabies/workflows/bold/base.py
nibabies/workflows/bold/confounds.py
nibabies/workflows/bold/hmc.py
nibabies/workflows/bold/outputs.py
nibabies/workflows/bold/registration.py
nibabies/workflows/bold/resampling.py
nibabies/workflows/bold/stc.py
nibabies/workflows/bold/t2s.py