MANIFEST.in
README.md
setup.py
docker/README.md
docker/construct_local_image.sh
docker/homelette.sh
docker/template_container/Dockerfile_homelette_template
docs/Makefile
docs/alignment.rst
docs/docker.rst
docs/evaluation.rst
docs/extension.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/organization.rst
docs/routines.rst
docs/extensions/extension_foldx.rst
examples/Tutorial1_Basics.ipynb
examples/Tutorial2_Modelling.ipynb
examples/Tutorial3_Evaluation.ipynb
examples/Tutorial4_ExtendingHomelette.ipynb
examples/Tutorial5_Parallelization.ipynb
examples/Tutorial6_ComplexModelling.ipynb
examples/Tutorial7_AssemblingPipelines.ipynb
examples/data/extension.py
examples/data/complex/3NY5.pdb
examples/data/complex/4G0N.pdb
examples/data/complex/aln_eff.fasta_aln
examples/data/complex/aln_ras.fasta_aln
examples/data/single/3NY5.pdb
examples/data/single/4G0N.pdb
examples/data/single/aln_1.fasta_aln
examples/data/single/aln_2.fasta_aln
homelette/__init__.py
homelette/alignment.py
homelette/evaluation.py
homelette/organization.py
homelette/routines.py
homelette.egg-info/PKG-INFO
homelette.egg-info/SOURCES.txt
homelette.egg-info/dependency_links.txt
homelette.egg-info/requires.txt
homelette.egg-info/top_level.txt
logo/logo.png