LICENSE
README.md
setup.py
bioluigi/__init__.py
bioluigi/cli.py
bioluigi/config.py
bioluigi/scheduled_external_program.py
bioluigi.egg-info/PKG-INFO
bioluigi.egg-info/SOURCES.txt
bioluigi.egg-info/dependency_links.txt
bioluigi.egg-info/entry_points.txt
bioluigi.egg-info/requires.txt
bioluigi.egg-info/top_level.txt
bioluigi/tasks/__init__.py
bioluigi/tasks/bcftools.py
bioluigi/tasks/cutadapt.py
bioluigi/tasks/fastqc.py
bioluigi/tasks/gatk.py
bioluigi/tasks/mirbooking.py
bioluigi/tasks/multiqc.py
bioluigi/tasks/rsem.py
bioluigi/tasks/samtools.py
bioluigi/tasks/sratoolkit.py
bioluigi/tasks/star.py
bioluigi/tasks/tabix.py
bioluigi/tasks/utils.py
bioluigi/tasks/vep.py
tests/test_bcftools.py
tests/test_fastqc.py
tests/test_multiqc.py
tests/test_rsem.py
tests/test_scheduled_external_program.py
tests/test_slurm.py
tests/test_sratoolkit.py
tests/test_utils.py