LICENSE
README.md
setup.py
tribolium_clustering/__init__.py
tribolium_clustering.egg-info/PKG-INFO
tribolium_clustering.egg-info/SOURCES.txt
tribolium_clustering.egg-info/dependency_links.txt
tribolium_clustering.egg-info/requires.txt
tribolium_clustering.egg-info/top_level.txt
tribolium_clustering/clustering/_GMM_with_testing_variables.py
tribolium_clustering/clustering/_HDBSCAN_predictionlist.py
tribolium_clustering/clustering/__init__.py
tribolium_clustering/clustering/_kmeansclustering.py
tribolium_clustering/clustering/_reform_cluster_prediction_list.py
tribolium_clustering/data_visualisation/__init__.py
tribolium_clustering/data_visualisation/_generate_measurement_image.py
tribolium_clustering/data_visualisation/_generate_parametric_cluster_image.py
tribolium_clustering/data_visualisation/_napari_and_plot_cmap_from_hexcsv.py
tribolium_clustering/data_visualisation/_napari_clusterimage_with_cmap.py
tribolium_clustering/data_visualisation/_plot_cvi_each_timepoint_3D.py
tribolium_clustering/data_visualisation/_plot_predictions_onto_UMAP.py
tribolium_clustering/data_visualisation/_plot_predictions_onto_scatter_plot.py
tribolium_clustering/data_visualisation/_plot_silhouette_scores_per_sample.py
tribolium_clustering/feature_extraction/__init__.py
tribolium_clustering/feature_extraction/_add_centroids.py
tribolium_clustering/feature_extraction/_generate_distance_matrix_and_touching_neighborcount.py
tribolium_clustering/feature_extraction/_min_maj_ax_to_aspectr.py
tribolium_clustering/feature_extraction/_regionprops_with_neighborhood_data.py
tribolium_clustering/feature_extraction/_scikit_regprops_3D.py
tribolium_clustering/feature_extraction/_topology_regionprops.py
tribolium_clustering/feature_processing/__init__.py
tribolium_clustering/feature_processing/_correlating_features.py
tribolium_clustering/feature_processing/_correlation_filter.py
tribolium_clustering/feature_processing/_filterregprops_manual.py
tribolium_clustering/feature_processing/_fit_pca_and_get_subset_limit.py
tribolium_clustering/feature_processing/_pca_99_expl_var.py
tribolium_clustering/feature_processing/_transform_PCA_99.py
tribolium_clustering/feature_processing/_variance_filter.py
tribolium_clustering/file_handling/__init__.py
tribolium_clustering/file_handling/_get_folder_path.py
tribolium_clustering/file_handling/_get_sorted_list_of_regprops_folder.py
tribolium_clustering/file_handling/_processed_dataset_class.py
tribolium_clustering/file_handling/_readcsv_as_cl_input.py
tribolium_clustering/image_processing/__init__.py
tribolium_clustering/image_processing/_resample_isotropic_nodownsample.py
tribolium_clustering/image_processing/_workflow.py
tribolium_clustering/preprocessing/__init__.py
tribolium_clustering/preprocessing/_local_avg_measurement.py
tribolium_clustering/preprocessing/_regprops_to_stdscld_categorised_pca_aslist.py
tribolium_clustering/preprocessing/_sscale_with_pretrained_scaler.py
tribolium_clustering/preprocessing/_standardscaler_for_dataframes.py
tribolium_clustering/two_d_processing/__init__.py
tribolium_clustering/two_d_processing/_marking_spots_plt.py
tribolium_clustering/two_d_processing/_my_imshow.py
tribolium_clustering/two_d_processing/_plot_horizontal.py
tribolium_clustering/two_d_processing/_random_cmap.py
tribolium_clustering/two_d_processing/_spot2image.py
tribolium_clustering/two_d_processing/_subtract_background.py