README.md
setup.cfg
setup.py
hail/__init__.py
hail/conftest.py
hail/context.py
hail/hail_logging.py
hail/hail_pip_version
hail/hail_version
hail/matrixtable.py
hail/table.py
hail/backend/__init__.py
hail/backend/backend.py
hail/backend/hail-all-spark.jar
hail/backend/local_backend.py
hail/backend/py4j_backend.py
hail/backend/service_backend.py
hail/backend/spark_backend.py
hail/docs/__init__.py
hail/docs/conf.py
hail/experimental/__init__.py
hail/experimental/annotation_db.json
hail/experimental/codec.py
hail/experimental/compile.py
hail/experimental/datasets.py
hail/experimental/db.py
hail/experimental/export_entries_by_col.py
hail/experimental/expressions.py
hail/experimental/filtering_allele_frequency.py
hail/experimental/full_outer_join_mt.py
hail/experimental/function.py
hail/experimental/haplotype_freq_em.py
hail/experimental/import_gtf.py
hail/experimental/interact.py
hail/experimental/ld_score_regression.py
hail/experimental/ldscore.py
hail/experimental/ldscsim.py
hail/experimental/lens.py
hail/experimental/loop.py
hail/experimental/pca.py
hail/experimental/phase_by_transmission.py
hail/experimental/plots.py
hail/experimental/tidyr.py
hail/experimental/time.py
hail/experimental/write_multiple.py
hail/experimental/dnd/__init__.py
hail/experimental/dnd/array.py
hail/experimental/vcf_combiner/__init__.py
hail/experimental/vcf_combiner/__main__.py
hail/experimental/vcf_combiner/densify.py
hail/experimental/vcf_combiner/sparse_mt_utils.py
hail/experimental/vcf_combiner/sparse_split_multi.py
hail/experimental/vcf_combiner/vcf_combiner.py
hail/expr/__init__.py
hail/expr/blockmatrix_type.py
hail/expr/builders.py
hail/expr/functions.py
hail/expr/matrix_type.py
hail/expr/nat.py
hail/expr/table_type.py
hail/expr/type_parsing.py
hail/expr/types.py
hail/expr/aggregators/__init__.py
hail/expr/aggregators/aggregators.py
hail/expr/expressions/__init__.py
hail/expr/expressions/base_expression.py
hail/expr/expressions/expression_typecheck.py
hail/expr/expressions/expression_utils.py
hail/expr/expressions/indices.py
hail/expr/expressions/typed_expressions.py
hail/fs/__init__.py
hail/fs/fs.py
hail/fs/google_fs.py
hail/fs/hadoop_fs.py
hail/fs/local_fs.py
hail/genetics/__init__.py
hail/genetics/call.py
hail/genetics/locus.py
hail/genetics/pedigree.py
hail/genetics/reference_genome.py
hail/ir/__init__.py
hail/ir/base_ir.py
hail/ir/blockmatrix_ir.py
hail/ir/blockmatrix_reader.py
hail/ir/blockmatrix_writer.py
hail/ir/export_type.py
hail/ir/ir.py
hail/ir/matrix_ir.py
hail/ir/matrix_reader.py
hail/ir/matrix_writer.py
hail/ir/register_aggregators.py
hail/ir/register_functions.py
hail/ir/renderer.py
hail/ir/table_ir.py
hail/ir/table_reader.py
hail/ir/table_writer.py
hail/ir/utils.py
hail/linalg/__init__.py
hail/linalg/blockmatrix.py
hail/linalg/utils/__init__.py
hail/linalg/utils/misc.py
hail/methods/__init__.py
hail/methods/family_methods.py
hail/methods/impex.py
hail/methods/misc.py
hail/methods/qc.py
hail/methods/statgen.py
hail/nd/__init__.py
hail/nd/nd.py
hail/plot/__init__.py
hail/plot/plots.py
hail/stats/__init__.py
hail/stats/linear_mixed_model.py
hail/typecheck/__init__.py
hail/typecheck/check.py
hail/utils/__init__.py
hail/utils/hadoop_utils.py
hail/utils/interval.py
hail/utils/java.py
hail/utils/linkedlist.py
hail/utils/misc.py
hail/utils/placement_tree.py
hail/utils/struct.py
hail/utils/tutorial.py
hailtop/__init__.py
hailtop/google_storage.py
hailtop/hail_logging.py
hailtop/tls.py
hailtop/aiogoogle/__init__.py
hailtop/aiogoogle/auth/__init__.py
hailtop/aiogoogle/auth/access_token.py
hailtop/aiogoogle/auth/credentials.py
hailtop/aiogoogle/auth/session.py
hailtop/aiogoogle/client/__init__.py
hailtop/aiogoogle/client/base_client.py
hailtop/aiogoogle/client/compute_client.py
hailtop/aiogoogle/client/container_client.py
hailtop/aiogoogle/client/iam_client.py
hailtop/aiogoogle/client/logging_client.py
hailtop/auth/__init__.py
hailtop/auth/auth.py
hailtop/auth/sql_config.py
hailtop/auth/tokens.py
hailtop/batch/__init__.py
hailtop/batch/backend.py
hailtop/batch/batch.py
hailtop/batch/batch_pool_executor.py
hailtop/batch/conftest.py
hailtop/batch/job.py
hailtop/batch/resource.py
hailtop/batch/utils.py
hailtop/batch_client/__init__.py
hailtop/batch_client/aioclient.py
hailtop/batch_client/client.py
hailtop/batch_client/globals.py
hailtop/batch_client/parse.py
hailtop/cleanup_gcr/__init__.py
hailtop/cleanup_gcr/__main__.py
hailtop/config/__init__.py
hailtop/config/deploy_config.py
hailtop/config/user_config.py
hailtop/hailctl/__init__.py
hailtop/hailctl/__main__.py
hailtop/hailctl/curl.py
hailtop/hailctl/deploy.yaml
hailtop/hailctl/hail_version
hailtop/hailctl/auth/__init__.py
hailtop/hailctl/auth/auth_list.py
hailtop/hailctl/auth/cli.py
hailtop/hailctl/auth/copy_paste_login.py
hailtop/hailctl/auth/login.py
hailtop/hailctl/auth/logout.py
hailtop/hailctl/batch/__init__.py
hailtop/hailctl/batch/batch_cli_utils.py
hailtop/hailctl/batch/cancel.py
hailtop/hailctl/batch/cli.py
hailtop/hailctl/batch/delete.py
hailtop/hailctl/batch/get.py
hailtop/hailctl/batch/job.py
hailtop/hailctl/batch/list_batches.py
hailtop/hailctl/batch/log.py
hailtop/hailctl/batch/wait.py
hailtop/hailctl/config/__init__.py
hailtop/hailctl/config/cli.py
hailtop/hailctl/dataproc/__init__.py
hailtop/hailctl/dataproc/cli.py
hailtop/hailctl/dataproc/cluster_config.py
hailtop/hailctl/dataproc/connect.py
hailtop/hailctl/dataproc/deploy_metadata.py
hailtop/hailctl/dataproc/describe.py
hailtop/hailctl/dataproc/diagnose.py
hailtop/hailctl/dataproc/gcloud.py
hailtop/hailctl/dataproc/list_clusters.py
hailtop/hailctl/dataproc/modify.py
hailtop/hailctl/dataproc/start.py
hailtop/hailctl/dataproc/stop.py
hailtop/hailctl/dataproc/submit.py
hailtop/hailctl/dataproc/utils.py
hailtop/hailctl/dev/__init__.py
hailtop/hailctl/dev/cli.py
hailtop/hailctl/dev/config/__init__.py
hailtop/hailctl/dev/config/cli.py
hailtop/hailctl/dev/deploy/__init__.py
hailtop/hailctl/dev/deploy/cli.py
hailtop/utils/__init__.py
hailtop/utils/process.py
hailtop/utils/rate_limiter.py
hailtop/utils/rates.py
hailtop/utils/time.py
hailtop/utils/tqdm.py
hailtop/utils/utils.py
j11hail.egg-info/PKG-INFO
j11hail.egg-info/SOURCES.txt
j11hail.egg-info/dependency_links.txt
j11hail.egg-info/entry_points.txt
j11hail.egg-info/requires.txt
j11hail.egg-info/top_level.txt
test/__init__.py
test/hail/__init__.py
test/hail/conftest.py
test/hail/helpers.py
test/hail/test_context.py
test/hail/test_ir.py
test/hail/test_no_context.py
test/hail/experimental/__init__.py
test/hail/experimental/test_annotation_db.py
test/hail/experimental/test_codec.py
test/hail/experimental/test_dnd_array.py
test/hail/experimental/test_experimental.py
test/hail/experimental/test_time.py
test/hail/experimental/test_vcf_combiner.py
test/hail/expr/__init__.py
test/hail/expr/test_expr.py
test/hail/expr/test_functions.py
test/hail/expr/test_ndarrays.py
test/hail/expr/test_show.py
test/hail/expr/test_types.py
test/hail/genetics/__init__.py
test/hail/genetics/test_call.py
test/hail/genetics/test_locus.py
test/hail/genetics/test_pedigree.py
test/hail/genetics/test_reference_genome.py
test/hail/linalg/__init__.py
test/hail/linalg/test_linalg.py
test/hail/matrixtable/__init__.py
test/hail/matrixtable/test_file_formats.py
test/hail/matrixtable/test_grouped_matrix_table.py
test/hail/matrixtable/test_matrix_table.py
test/hail/methods/__init__.py
test/hail/methods/test_family_methods.py
test/hail/methods/test_impex.py
test/hail/methods/test_misc.py
test/hail/methods/test_qc.py
test/hail/methods/test_statgen.py
test/hail/stats/__init__.py
test/hail/stats/test_linear_mixed_model.py
test/hail/table/__init__.py
test/hail/table/test_grouped_table.py
test/hail/table/test_table.py
test/hail/typecheck/__init__.py
test/hail/typecheck/test_typecheck.py
test/hail/utils/__init__.py
test/hail/utils/test_google_fs_utils.py
test/hail/utils/test_placement_tree.py
test/hail/utils/test_utils.py
test/hailtop/__init__.py
test/hailtop/batch/__init__.py
test/hailtop/batch/test_batch.py
test/hailtop/batch/test_batch_pool_executor.py
test/hailtop/gear/__init__.py
test/hailtop/gear/test_deploy_config.py
test/hailtop/hailctl/__init__.py
test/hailtop/hailctl/dataproc/__init__.py
test/hailtop/hailctl/dataproc/conftest.py
test/hailtop/hailctl/dataproc/test_list_clusters.py
test/hailtop/hailctl/dataproc/test_modify.py
test/hailtop/hailctl/dataproc/test_start.py
test/hailtop/hailctl/dataproc/test_stop.py
test/hailtop/hailctl/dataproc/test_submit.py