biopandas
biopython
bioservices
matplotlib
multipledispatch
networkx
numpy
pandas
plotly
pydantic
pyyaml>=5.1
sklearn
scipy
tqdm
wget
xarray

[all]
black
pytest-xdist
furo
pycodestyle
flake8
hypothesis
isort
sphinx
pydocstyle
pre-commit
interrogate
nbsphinx-link
pytest-cov
nbsphinx
pandoc
nbstripout
sphinx_rtd_theme
nbval
pytest

[dev]
black
flake8
furo
hypothesis
interrogate
isort
nbsphinx
nbsphinx-link
sphinx_rtd_theme
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
sphinx

[extras]
black
flake8
furo
hypothesis
interrogate
isort
nbsphinx
nbsphinx-link
sphinx_rtd_theme
nbstripout
nbval
pandoc
pre-commit
pycodestyle
pydocstyle
pytest
pytest-cov
pytest-xdist
sphinx
