MANIFEST.in
README.md
requirements.txt
setup.cfg
setup.py
sierrapy/__init__.py
sierrapy/cmds.py
sierrapy/common_types.py
sierrapy/fastareader.py
sierrapy/sierraclient.py
sierrapy.egg-info/PKG-INFO
sierrapy.egg-info/SOURCES.txt
sierrapy.egg-info/dependency_links.txt
sierrapy.egg-info/entry_points.txt
sierrapy.egg-info/requires.txt
sierrapy.egg-info/top_level.txt
sierrapy.egg-info/zip-safe
sierrapy/commands/__init__.py
sierrapy/commands/cli.py
sierrapy/commands/fasta.py
sierrapy/commands/introspection.py
sierrapy/commands/mutations.py
sierrapy/commands/options.py
sierrapy/commands/patterns.py
sierrapy/commands/recipe.py
sierrapy/commands/seqreads.py
sierrapy/fragments/__init__.py
sierrapy/fragments/hiv1_mutations_analysis_default.gql
sierrapy/fragments/hiv1_sequence_analysis_default.gql
sierrapy/fragments/hiv1_sequence_reads_analysis_default.gql
sierrapy/fragments/hiv2_sequence_analysis_default.gql
sierrapy/fragments/sars2_mutations_analysis_default.gql
sierrapy/fragments/sars2_sequence_analysis_default.gql
sierrapy/fragments/sars2_sequence_reads_analysis_default.gql
sierrapy/recipes/__init__.py
sierrapy/recipes/alignment.py
sierrapy/recipes/mutationtsv.py
sierrapy/recipes/sequencetsv.py
sierrapy/viruses/__init__.py
sierrapy/viruses/hiv1.py
sierrapy/viruses/hiv2.py
sierrapy/viruses/sars2.py
sierrapy/viruses/virus.py